Rmax003947.1
Basic Information
- Insect
- Resseliella maxima
- Gene Symbol
- -
- Assembly
- GCA_029041755.1
- Location
- JAQOWM010000164.1:277327-278891[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.4e-06 0.0043 17.3 0.0 9 40 266 296 261 301 0.80 2 4 3.1e-09 5.5e-06 26.6 0.0 4 39 310 345 310 351 0.88 3 4 0.0017 3 8.2 0.0 23 38 377 392 366 396 0.81 4 4 1.1e-11 2e-08 34.4 0.1 5 39 419 452 417 458 0.88
Sequence Information
- Coding Sequence
- atggatTCAGCAACAatattaaacaatttcaaatggaatgacCATAAGAAACATATTATTGAAGAACAAAGATATTTGTTTGACAACAATTTGGAGAGTGATTGTGTGTTGATATCAGCACAAGGAGATCGTTTTCAAGCGCATCAGGTTGTTTTGTCATCTTCAAGCGAATTTTTCCGTAAAATATTAAACGAATTACCaccattgaatgaaaaaccaatgATTCAAATTCCAGATATTGATTCTTGTGTTTTAGAAGCGATTATAATGTTTATTTACATCGGTGAAACAAGTATTTCATCCAAATATTTGGCTACATTACTTGAATTCTGCGATTGTCTTGATATTAAAGGATGCGTCGCAAATGGTTTTACATTAAATGGAACTGGATCAGGAACTGCAACCGGACATAAAATTGGTGATGATGCTGTGCATCAAAGAGGTTTCAAGTGTAGTAGTTCAAGAAAAAGTTGGTCAAGTGAAGAATATCTGATGATTGATCAaactgaaaatgtaaacagtGAAGAAGACAACATTGAACCAGATTATTTGGAAGAATATTTGGAAGATGAAGGATCAATTGatataaaagaagaaaatttttcaatggacAATGTTGAGAATGGACAAGTTTgtgacaatgaattttttcccacggaaatagaaaaatcaGTAGACGATGTGCTTGATGAATCACCAAAAGATCAAAAATATACTACTCAGGGAAACGGCAAACGTCAGCGCAGTGTAAATCGTCAAGGCGTACGCAGCACAAGTTCACAAATCGATAAAGTATTAAATGAAGTTAACAACGGAAAAACAATACATCGATTGTCTGTAGAATATAATTTGCCTCGTTCGACTTTATATCATCGTTTCCGTAACaatgacaatttaaaacaaaattatcgaCTCGAAAGAAAATTTGCACTGGAAAATGCCGTAAAAGCCGTATTAAAAGAACGCTTAAGCTTAAAAACTGCGGCTGATAGATATAATGTGCCGAAAACTGCAATTTGGCGGGAAGTACGAAAATGTGGCCAATACAAACCTTCAAATAAAGAGCTAACAACTGAAAGAAAGAACGCACAAAGCGAAATTTTATCTGGAAAGAGTTTGACAAGCATTAGTGCTAAATACGGCATACCATTGACAACGCTTCATCGGGATAAGAAAAAACTTTCTATTGAAGGAACGCTACCGGAATCATTTCGTGTTAAAGATCGAACCGAAAATTCTGAGTATAGTCAACGTTTAGAAATGGCTTTGAAAAAATGCCGAAGTGGAATGTCACAATATCAAgCTGCAAAACTATATAATATTCCTAAAGCGACTATGTGGAGATATGCAAATGCATCAAATAAATCCAATCGaagagcaaaaataaaacagattgaacaaaatgaagaacTGCAATAA
- Protein Sequence
- MDSATILNNFKWNDHKKHIIEEQRYLFDNNLESDCVLISAQGDRFQAHQVVLSSSSEFFRKILNELPPLNEKPMIQIPDIDSCVLEAIIMFIYIGETSISSKYLATLLEFCDCLDIKGCVANGFTLNGTGSGTATGHKIGDDAVHQRGFKCSSSRKSWSSEEYLMIDQTENVNSEEDNIEPDYLEEYLEDEGSIDIKEENFSMDNVENGQVCDNEFFPTEIEKSVDDVLDESPKDQKYTTQGNGKRQRSVNRQGVRSTSSQIDKVLNEVNNGKTIHRLSVEYNLPRSTLYHRFRNNDNLKQNYRLERKFALENAVKAVLKERLSLKTAADRYNVPKTAIWREVRKCGQYKPSNKELTTERKNAQSEILSGKSLTSISAKYGIPLTTLHRDKKKLSIEGTLPESFRVKDRTENSEYSQRLEMALKKCRSGMSQYQAAKLYNIPKATMWRYANASNKSNRRAKIKQIEQNEELQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01288350;
- 90% Identity
- iTF_01288350;
- 80% Identity
- iTF_01288350;