Rmax023913.1
Basic Information
- Insect
- Resseliella maxima
- Gene Symbol
- -
- Assembly
- GCA_029041755.1
- Location
- JAQOWM010000976.1:212962-215488[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.3e-12 5.9e-09 36.1 0.0 1 39 82 121 82 125 0.90 2 4 1.7e-13 3.1e-10 40.1 0.1 2 39 137 174 136 177 0.94 3 4 8.6e-18 1.5e-14 53.9 0.0 1 45 191 236 191 236 0.97 4 4 1.4e-17 2.4e-14 53.3 0.0 1 41 243 284 243 287 0.94
Sequence Information
- Coding Sequence
- ATGCCTTCACAGCCATCGACACCACATCAACCTCCATCGAAGTCTAATAACGAGATTGATCTAAGTATTGTAAAACAAGAGACAAGACCGAAGAAAAAATCTAAAAccaagcaaaataaaaaccaaatggatACTACTGAAGACACTATTATGAATGAATCAGCATCCGATAGGTCATCTCCACAATACACTAATTTGacatcacaaaatgaaaagagctCACAAAATAGTCCAAAAACGTGGACACAAGAAGATATGGATTCAGCATTAGAAGCACTTCGTAGCCATAATATGAGTTTAACTAAGGCATCAATGACATATGGCATTCCATCCACCACACTTTGGCAACGGGCGCATCGTCTTGGTATAGATACACCAAAAAAGGATGGTCCAACCAAATCATGGAACGAAGATTCACTAAACAGTGCATTGAATGCTTTGCGCACAGGACAAATTTCTGCAAATAAAGCATCTAAAGCTTATGGCATTCCATCATCCACACTTTATAAAATTGCTCGACGTGAAGGCATTCGTTTGGCAGCGCCATTTAATGCCGCGCCTACAACATGGTCACCGGAAGACTTGGAACGTGCGCTGGAAGCAATTCGTGGTGGGCACACTTCAGTGCAAAAGGCTAGCGCTGAGTTTGGTATTCCAACTGGGACATTGTACGGTCGCTGTAAACGTGAAGGCATTGAACTGTCACGTTCAAATCCAACTCCATGGTCGGAAGATATTATGTTGGAAGCACTGGAATCGGTTCGATTGGGGCAAATGTCTGTTAATCAAGCAGCTATCCATTACAATTTGCCATATAGTTCTTTGTACGGTCGCTTTAAACGTGGCAAATTCGACACAAATGGTTCAACAGACGCGTTGAATACGTCGCAAAACGAACAGCAACAGCAGTCAAGTCAACAGGCTCAAGTCAATCAACAACAGcatacacaacaaaatattcagaCACATCAATCGGTTCCTGTTACCCAAACAACTCAAGCACATCATATTACTACGCAACCACATCAACCCCAAGTGACTCAAGTTCAGCAACATCAACAGTCACAAACTATTCAACTTGATCATCCACAGCAACATCATGTTATTCAAttacatcaacatcaacagaAGTCGTATCAACCCCCTCCACAGCCAATTGCTATTAATACGTTCCAATATAATCCGGGTCCAAGCACAAATCAAGCGCTTCAGCtaaatccgcatcttcaacAGATTCATCATTTACCACACATGTTAACATCGCAATCACCGTTgcttaatttaaatttacatccTCCACAGTTACAAATTCATCACATTCAACATCCGTTAAGTCGTCAACAAATGTAA
- Protein Sequence
- MPSQPSTPHQPPSKSNNEIDLSIVKQETRPKKKSKTKQNKNQMDTTEDTIMNESASDRSSPQYTNLTSQNEKSSQNSPKTWTQEDMDSALEALRSHNMSLTKASMTYGIPSTTLWQRAHRLGIDTPKKDGPTKSWNEDSLNSALNALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWSPEDLERALEAIRGGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDIMLEALESVRLGQMSVNQAAIHYNLPYSSLYGRFKRGKFDTNGSTDALNTSQNEQQQQSSQQAQVNQQQHTQQNIQTHQSVPVTQTTQAHHITTQPHQPQVTQVQQHQQSQTIQLDHPQQHHVIQLHQHQQKSYQPPPQPIAINTFQYNPGPSTNQALQLNPHLQQIHHLPHMLTSQSPLLNLNLHPPQLQIHHIQHPLSRQQM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -