Basic Information

Gene Symbol
Arid2
Assembly
GCA_029041755.1
Location
JAQOWM010000438.1:3511692-3520708[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-23 3.4e-20 72.8 0.0 2 89 57 142 56 142 0.95
2 2 9 2.7e+04 -12.7 11.0 46 46 1671 1671 1627 1715 0.52

Sequence Information

Coding Sequence
ATGACTACAACAGATACGACAGCTGGTGCACCTCTAGCCATATCAGTGAATGATGATTCAGTGAGCAGTGCTTCGAAAACCGGTTCAACAAAAAAGCATTATGTACAACATTTTCCGCCACAACAAGCAACCCCAATCAATCGCCCAAATACCGTTGATGAACGCGACAAAGCTAGCtttttaaaagatttatatcattttcatgaaGTCAAAGgAACACCAATTCCACGGCCGCCTCGCGTAAATGGACAAGAAATTGATctacataaattttattcattggtTTGCAGTCGTGGGGGATGGGCCAAGATAAATTATCGCAATGAATGGGAGGATTTAGTACCTGAATTTGATTTGCCAAGCAAATGTGTAAATGCATCGGTGGCATTAAAGCAAATTTATATGCGATTTTTAGATCgttatgaaaaaattcattttcttggCGAAGATAATGATCGAATTACAGATGAAACGGATGAAGATAATCGGcataaaaaatggaataataaacattttaatgatgtaccaatgaaatacaattatATGCAGCATAATGTTGCCGAAAATATGCGTGCCAGTCATAAGCTATCAACTGATTTATATAAATCATCTGAATATGAACGTTTATTAATGTCATTAATGTCACCGTTACCAAATGAACAAGATTTTGCTGTAAATGTATGCACACTAATGGCCAACGAAAGTAGGCACACATTAAAAGTTGAACGATGCCCAAAATTATTAGATGCTCTAATGGGACATGCTGGAGTTTATTCACATCATTCAATGCGTGAGCTCTTTTTTGAGTTTTATTCCAATGTTCGAAAGCATTCATTGCAATCATTCTGGAATGATTGTTTGCATGATAAACCCGATATAATGGAATTAACATATGAAGATTATTTTGAAGTggatgaaaatttatcaacaaatgTTTCGGGACGACCACCAGTGCGGCTGcgaaataatgataatgaaacatttgaagaTGGTTTAAATACACGACCAAATGAATTAACGGAATTTTCatcattggattttttaaatttaaaacgtGGTTTAGGAACACATGATTATATCGGTCAACGTGTACATCAAGTATCAACAATTTGTcgaaatttatcatttttcgatgaaaatttaccaattattgtaaaaaatcGAACATTTGTACGATTTTTAGTGATGTGCGCAAATATTCGATGGGGTAATTTACATCAAATGGGATTGGATACGCTTGGTAATATTGCCATTGAATTGGATTTATGTGATCCAAACAATGATAGtttaacaaaatgtttattagcAACAATAGCCGAAGGTTTAGAAAGTCCTGATCGTGGTGTAATTATCAGTTGTTTggaaattttatataaattatgtCAAAAAGGATCAAATGAAGAgcatttacataaatatttggATAAACGTGTTTATCGTcaaatttgtatgtatttatcattaaatgatattatgctattattatatacattggaatgtttatttgcattatCATCAATGGGTGAAAAAGCATGCTTTGCCATTGTACAAATAAATGGTGTTATCGATACATTAGTTTCACTTGTATCGGTTGAAGCACAAAGCTATGGCCCAGATGGATGCATTTTAATGCGTGTTGTTGAAACAGtaccaacaccaacaacaacatcaaccaccacacaacaacaaaatcatcaaacgCATCATCATAATTATCAACAAATATCACATGCACAACCACAACCAGTTATAACACAACTTCAAAGTTCACCATCAACTGCAACCGTTCATATGCCCGATCGTAATGTTattgaaaatcgaattgaagTTAAAACTGAATCACAACGAATTGAAAAATCCCATGCCGCTCCAATTGTatcgcaacaatcaaatgatattcCAAATAATCAAGATCAAGCAACAGTATCGCAACCACAtccgcaacaacaacaacaacagcaacaacaacaacaacagcaacaacaacaacaatcgcAACCATCATTACCATCACCCCCTCCGACAATAGTACAGTCAATGATTCCATCAATGCCAACTGTAGCACAAAGCCCAATTGTGGTGCCAGTGCCAAAGCTTCAAACGCCACAAGTTCAAATTAAAAcggaaataaaatcaaatcaaattattgtaCAAAATAGCGAAATTGGAGCAACAGTTTATAATACACCAATAACAGTTAAAACACAAACAACTGCATcaccaacaataacaacagccGCACCAACATTTTTAACCAGTTCAAATGTTGTATATTcagaacaacaaacaacaacaatacataCATCATCggcacaaaatcaaaattcatttaaacttGCACAAGATCAAGAAAACGAACAATTTGCATTGGCCTGGTTGCGTGCCACATTTGAACCAGCCAGTACGCCTGGATCACGAATTGAACAACAagatttatataaaatgtacTTAACCGCATGCTCAAAAATTGGCCGAACTGGCGTTGTATCACAACATCATTATCCACGTTGTGtacaaaatgtatttggaAATACAGTCGGAccgaatcaaattaaaattaaattaaatactaTTGCATCATACTATGAAGGTATTCGTATTCGTGCTCAACCATTGGCTGTTGTACACAAAGGAACAATTTTGCAAGCGGCTGtaacaacgacaacaataaaaactcccgaaaatgcaataaaaaaagaacaatcgCCAATAATTAAAAcgcaaatgattcaaaatcaaaaggTCAATATGAATCAAACgattcaacaatcaaatgcATCATCTGCATCAATTTTACAGCATGTATTGAGTagcaatcaaaatgaacatgTTCATATGACACAAAATCGTACAACAACAATACGacaatcaacaaattcaacaattgtatcatcatcatcattatcatcatcatcatcatcatcatctgtAATTGGTACAACATCTGTAACTGCTACATCGCAATCATCATTGATCAAAGCTATTTTAGCCAATAAGGTAACAACTGTTGATGGCAATATAATTGGCACGCCGAAAATAACAACCAACTTAGTTCCATCGATAAATCCTAGTATTATTACCGCTACTAGCAGTATGAATGTGCATCAGgTTGCACAACGACAGCATTTACAAAAGCAACGAGAAGCCCAATTGGCTGCAGcaaattcatcaataaatgtGACAAATGTAAGCATTGGAAAGGAACCAAAAGCTACTATAGTTATAAAAACACCAACCGGAACAGTACCATCAAATATTAAAGTCAGTGGTAACACATTAATACCAACaacaattattgaaaagaaagCCGAATCAATGCTTGAAGCATATAAACCAAATTGGGATCCAGTACCACCATTGGCACCATTAAGTAGTAACAGTATACGTCCAACAAGTATTATTGCTTCAATACCAATTCCAACAGTAAGCCCATCAAAAGTTGATGATGATTCAAATTCCACCAATCAATCAGCTAATTCCAGTGTATATGGGCCAACAAGTTATCAAGATGAATCAGATAGCCCATTTGCTGGTTTCGAAGGTTTATTAGTACCGGGAAATATGCGGGTCGATGATGATGGTAAAGACATCATGAAGCATTCGCACGTTgttaatgcaaataaaatgcttgCCGACTTACTTGAACGTAAATCGTCTGATCCACCATTTAATGTTTCAGGCGATATAAGCAATAAGCgaaaaattgatacaaatacaaatcaaaacatCGATGAACCACCAGTCAAACgatcaaatttcattgaaaatgatcatacaaatgataaaaagaatgcaacaaaatcatcatcaagtGCAGCAAATTTGTATGCAAAATTAGCTGCATCATTATTTGAAGGTGAAGATATGGATATGGATGAAACAATACCAACACAAccgcaacagcaacaacaacaacaacaacaacagcaacagcagcaacagcagcaacagcagcaacagcagcaacagcagcaacaacagcaacaacagcagcaatcGATTATACAACAAACATCTGTTGTTGAACAGCAAAAATCAGTGATTACTGTGCCAATGCAACGACAAATTATCGTTTCACCCAATAAtgCTCGTCCACAAATGATAATCGCACCACCAACATCAACACCACAAATGGGCCAAGCGACAGCAACTATAAAAACGGGCGACGGTGCATTCCAAACAGTACCAGTTATACTGCAACATGGtaacaatcaaattaaacaaattggTGGCATCGGACAGCAAATCATTCAACCAGTtCCACAAACCCAGTATATGCTAGCCACAAATCAACAAGGTCAAACATATTTGGTAGCACAACAACAACCGCCACCggttaatcaaattttattgacaCAAACATCACAACAGCAAGGTGGAGCACCAactaaaacaattattattttacaaCAGCAAACACCAACTGCAGTGAATACAGtGTCAACACCACAGAAAATGATCATGACAACACAACAAGGTCAACAAATGATTGTGACCCAAGTGCCACGACAACATCATGTTATTGTTAATCAACATTCTGGAAATGCCGGTGCTAATGTCATTCAGTCTAATCCGCAAATGTCATCGACAAATGCGATTATCAATCAAATGACAAGTACACCAATTAATTCAAGCACTCAACCGCAACTTCTTCCCCATATGAGAGCCGTCAATTCAGTGTCGCATACACCAATGACAATGACACCAAACGTAATAACAACcagcgaaaagaaaaaggtTTTTGTAACGGGTAGCGGTAACATTGAAGTGACTCAAGTGTCTCAACCAATTTCATATCCTCCACCAAATGTAATACAAAATGTAACGCCAAATGTAACAACAAACGTGATACAGAAACCGAttcaacagcagcagcagcagcagcatcaacatcagcagcagcagcaacagcatcaCCAACAGCATCAACAGCATCAACAACACCCACATCAACagcatcatcaacaacatcatcaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacatcatcatcaccagcatcaacaacaacaacagcagcatcagcagcagcagcaacaacaccAGCAgcatcagcaacaacaacaacatcagcaGCATCAGCAACAACATTGTGTCAATTCATCAGTTCAATCGACAATAAGTCCAGCCCCATTGATAAATCAATCGCAATCAAATGTGGTGCCAACACCAACAAAACCAGTTATCCAACCGCCCTATCAACCGTCAATCAAAGTTGAACCAAATGTagtgaaaaatgaagatgaaatcGATGTTAATTGGTTATATGTTTGTGATTGGCGTGGATGccaaagAAGAAAATTCCGTTCAGCAAATGAAGTATATTTGCATGCATGTGCAGAACATTGTCCAGATAATATTGATCCAAATGCAGATATTTATTGCCAATGGGGACCGGGACCAAATTTATGCGATAATTTACCAAGAAAACGATTCTCATTGATGACACATATTAATGATCGTCATATAACAATGGATTCATTTAAAACAGCCGTACAAAGACGCATTGCAAATGGTCCACAAACACAAGTCACCCAACCggtaacaataataaaaaaaccaatgcCACCAAATTCCGGTGATAATACCGGTACAGCATCACCAACattatcaacatcatcaacaagTTCATTATCAGCCGGAAGTAGTGCAGCAATGCAAGCAATCAAACGACATTCAATGGACCTCATCAATCCAAAAGAGCTTATGTTTCAGGATGAAAATGAGGGCCCTGTAACAAAGAGTATTAGATTGACAGCTTCATTAATTCTACGAAATCTGGTGAATTATACAACAACAGCCAAACGATGTTTACGATATTATGAGCCGCATTTATCTAGCATTGCATTAAGTAATGTCGAATCAAGTCGGACTATCGCACAAGTtctttatgaaatgaatgaaacacgACCGTATTAA
Protein Sequence
MTTTDTTAGAPLAISVNDDSVSSASKTGSTKKHYVQHFPPQQATPINRPNTVDERDKASFLKDLYHFHEVKGTPIPRPPRVNGQEIDLHKFYSLVCSRGGWAKINYRNEWEDLVPEFDLPSKCVNASVALKQIYMRFLDRYEKIHFLGEDNDRITDETDEDNRHKKWNNKHFNDVPMKYNYMQHNVAENMRASHKLSTDLYKSSEYERLLMSLMSPLPNEQDFAVNVCTLMANESRHTLKVERCPKLLDALMGHAGVYSHHSMRELFFEFYSNVRKHSLQSFWNDCLHDKPDIMELTYEDYFEVDENLSTNVSGRPPVRLRNNDNETFEDGLNTRPNELTEFSSLDFLNLKRGLGTHDYIGQRVHQVSTICRNLSFFDENLPIIVKNRTFVRFLVMCANIRWGNLHQMGLDTLGNIAIELDLCDPNNDSLTKCLLATIAEGLESPDRGVIISCLEILYKLCQKGSNEEHLHKYLDKRVYRQICMYLSLNDIMLLLYTLECLFALSSMGEKACFAIVQINGVIDTLVSLVSVEAQSYGPDGCILMRVVETVPTPTTTSTTTQQQNHQTHHHNYQQISHAQPQPVITQLQSSPSTATVHMPDRNVIENRIEVKTESQRIEKSHAAPIVSQQSNDIPNNQDQATVSQPHPQQQQQQQQQQQQQQQQQSQPSLPSPPPTIVQSMIPSMPTVAQSPIVVPVPKLQTPQVQIKTEIKSNQIIVQNSEIGATVYNTPITVKTQTTASPTITTAAPTFLTSSNVVYSEQQTTTIHTSSAQNQNSFKLAQDQENEQFALAWLRATFEPASTPGSRIEQQDLYKMYLTACSKIGRTGVVSQHHYPRCVQNVFGNTVGPNQIKIKLNTIASYYEGIRIRAQPLAVVHKGTILQAAVTTTTIKTPENAIKKEQSPIIKTQMIQNQKVNMNQTIQQSNASSASILQHVLSSNQNEHVHMTQNRTTTIRQSTNSTIVSSSSLSSSSSSSSVIGTTSVTATSQSSLIKAILANKVTTVDGNIIGTPKITTNLVPSINPSIITATSSMNVHQVAQRQHLQKQREAQLAAANSSINVTNVSIGKEPKATIVIKTPTGTVPSNIKVSGNTLIPTTIIEKKAESMLEAYKPNWDPVPPLAPLSSNSIRPTSIIASIPIPTVSPSKVDDDSNSTNQSANSSVYGPTSYQDESDSPFAGFEGLLVPGNMRVDDDGKDIMKHSHVVNANKMLADLLERKSSDPPFNVSGDISNKRKIDTNTNQNIDEPPVKRSNFIENDHTNDKKNATKSSSSAANLYAKLAASLFEGEDMDMDETIPTQPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSIIQQTSVVEQQKSVITVPMQRQIIVSPNNARPQMIIAPPTSTPQMGQATATIKTGDGAFQTVPVILQHGNNQIKQIGGIGQQIIQPVPQTQYMLATNQQGQTYLVAQQQPPPVNQILLTQTSQQQGGAPTKTIIILQQQTPTAVNTVSTPQKMIMTTQQGQQMIVTQVPRQHHVIVNQHSGNAGANVIQSNPQMSSTNAIINQMTSTPINSSTQPQLLPHMRAVNSVSHTPMTMTPNVITTSEKKKVFVTGSGNIEVTQVSQPISYPPPNVIQNVTPNVTTNVIQKPIQQQQQQQHQHQQQQQQHHQQHQQHQQHPHQQHHQQHHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHHHHQHQQQQQQHQQQQQQHQQHQQQQQHQQHQQQHCVNSSVQSTISPAPLINQSQSNVVPTPTKPVIQPPYQPSIKVEPNVVKNEDEIDVNWLYVCDWRGCQRRKFRSANEVYLHACAEHCPDNIDPNADIYCQWGPGPNLCDNLPRKRFSLMTHINDRHITMDSFKTAVQRRIANGPQTQVTQPVTIIKKPMPPNSGDNTGTASPTLSTSSTSSLSAGSSAAMQAIKRHSMDLINPKELMFQDENEGPVTKSIRLTASLILRNLVNYTTTAKRCLRYYEPHLSSIALSNVESSRTIAQVLYEMNETRPY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-