Basic Information

Gene Symbol
Kdm5
Assembly
GCA_029041755.1
Location
JAQOWM010000871.1:29526-40890[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-23 4.3e-20 72.4 0.0 2 89 163 246 162 246 0.95

Sequence Information

Coding Sequence
ATGCAAATCAACAGCATCGAATCAAGTAAATCGACAAAGACTGAACCAATTGAAACCATCGATTTGGATGACAGTCCTAGCAAAAATGACGTAATATCAGTGTCATCACAGGAATCGGACACAAAAACATCACCGGCTAATCCACAAACATCGACGTCAGTATCTGCATCCGCATTCGCATCATCTTCATCACGTCCAATTATAGCACAGTCAGCACGTCAATCGCACAGCTCATTCTCcatcataaaaaatgaagagttCGAATTTGAAGTGCCAGAAGAGGCCCCCACTTTCATTCCCAATGAACAAGAATTCAAAAATCCCCTAACATATATCAGCAAAATTCGGCCTATGGCCGAAAAATATGGCATTTGCAAAATTCGACCGCCACCGaCATGGCAGCCACCATTCACAGTAGATGTGGATAAGTTGCGTTTTACACCTCGTGTGCAACGGTTAAATGAACTAGAAGCAAAGACTCGggttaaattgaattttctggATCAAATTGCTAAATTCTGGGAATTACAAGGATCTTCGTTGAAGATCCCAATGGTTGAACGTAAAGCACttgatttatattcattgcATCGCCTTGTTCAAGAGGAAGGTGGATTAGAGGCGTCAACAAATGGACGTAAATGGTCAAAAATTGCATCACGAATGGGATATCCGGTGGGAAAAAGTGTTGGCACTATTTTAAAGGGTCACTATGAGCGaattctttttccatttgatgtCTTCACTTCGGGCAAAGGTGGCGAACTCaagCCAAAACTTGAATCGGACTCTGATGATCATGATTATAAACCACATGGAATTCCATCGCGTCAAAATGTCACACCACCAACGGAAACAACTGCAAGGCGATCTCAACGATTTATTGTAAAATCTGAGATAAAATCCGATGATGAATGCGACGATACTGATGAAAGTGTAAAGTCCACAAAACGAGTTACCCCACAGAAAAACGGTGATAACAAACTAGGTAGCGCCTCCGATGCGGCAGCTAATACGGCAGCCACTGCTCGTGCTGAGTTACGTCGTTTACAAATTTACGGAGCTGGCCCAAAAATGCCgggaattaaatcaaaatcgggtcaacaatcaaatcaaacaacaCCGACAAAATCCCGAATGAATGGTAGCAACAACAGTCGTCAACAAAGACAACAAACAAATCGACGCAATCATGCCGATCCATTGGCTAAGTATATTTGTCATATTTGTACGCGCGGTGATGGTGAAGAAGCAATGCTATTGTGCGATGGATGCGATGATAGTTAtcacacattttgtttgattccACCGTTGGCCGATATACCAAAAGGTGATTGGCGATGTCCAAAATGTGTTGTTGAAGAGGTTAGCAAACCGGTTGAAGCATTCGGATTTGAACAAGCGCAACGTGAATACACTCTACAGCAATTTGGCGAAATGGCCGATCAATTTAAGGCagattattttaatattccCGTGCACTTGGTACCAACCGAATTGGTTGAACGAGAATTTTGGCGCATTGTTTCGTCAATTGATGAAGATGTGGCCGTTGAATATGGCGCCGATTTGCATACAATGGATCATGGTTCTGgttttccaacaaaaaattcattatatttgttGCCCGGCGATTTGGAGTATGCGGACAGTAGTtggaatttaaataatttaccaTTGTTGGAAGAGAGCGTTTTAGGGCATATAAATGCTGACATATCAGGAATGAAAGTACCATGGATGTATGTTGGCATGTGTTTTGCAACATTTTGCTGGCACAATGAAGATCATTGGAgctattcaattaattatctGCATTGGGGTGAACCGAAAACATGGTATGGTGTACCCGGCAGTCAAGCCGAAGCATTCGAAAATACAATGCGAAGCGCCGCACCTGAACTATTCCAATCGCAACCAGATTTATTGCATCAACTGGTCACGATTATGAATCCAAACACATTAATGCATGCTGGCGTTCCAGTTTATCGCACCGATCAACATGCTGGTGAATTTGTAATCACTTTTCCCAGAGCCTATCATGCTGGCTTTAATCAAGGTTACAATTTTGCAGAAGCTGTCAATTTTGCGCCAGCCGATTGGATCAAAATGGGACGTGAATGCATaaatcattattcaaatttgcGAAGATTCTGTGTGTTTTCACACGATGAATTGGTTTGTAAAATGGCATTGGATCCAGACAAATTGAATCTAGGCATTGCAACAGCATGCTACTTGGATATGGCCGAAATGGTTGATACGGAGAAAAAACTACGAAAATGTTTACTTGAATGGGGTGTTACAAAAGCTGAACGCGAAGCATTCGAATTAATACCAGACGATGAGCGTCAATGTGATGTGTGCAAAACCACCTGCTTTTTATCAGCCGTAACATGTACATGTGTTAAATCATTGGTATGTTTACGTCATTATTCAGAATTGTGTAAATGCGCACCAGAAAAACATACACTTAAATATCGATACACACTTGATGAGTTGCCGTTAATGTTGCGAAAACTAAAAGTTAAagctgaatcatttgaaacttGGATCACAAAAGTGCGTGATGTACTCGATCCAACAACACCCACCACAATGACATTAGATGAACTACAAGAATTGGCACAAGAAGCCGAGGATAAAAAGTTTCCATCGTCTGTTTTACTTGAACGATTGAATTCAGCTGTTTTGGAAGCAGAGAAATGTGTTACAGTCATTCAGCAATTGGACATAAATAAAGTGCGAACACGAACAAGAAATTCATCATGCGAAATAGCCAAATATAAATTGACAATTGAAGAATTGGATATGTTCGTACAGGAAATAGATAATTTGTGTTGTGTCATCAAAGAGGGAAGCAGTGTACGTGAATTGCAACAAATTGGAAAAGAATTTGCCGAACTTGCAACATATCTACTGAAGGAGCCGATAAGTGAAATTAAAGAATCAGCCGTTGAAAAAATGATCGAAGAGGGTAGTGCATTATGCATTGAATTACAACAAATGAAACCGTTAAAGGCGTTACTTGAGAAAGTTAAATGgtacaATAATGTGAGAGAAATTCGTGAAGCagatgaaaaaattccattggatgtaataaaaaaattattaaccGATGGTAATGCACTGAGCGTGGTAGGAGAATTGGATGATACATTGGTACAGCAGGAATTACAAGATTTACAAAGTGTATTAATGGATATCGAAGAATGGGAAGCCGATTCAAAGAAATGCTTTGAGAGTGGTACCCAGCATGATATACCGGAAATTGAAGAGCTTTTAAATCGAGCCAGTTCAATTGAAGGTGAACTACCATCTCAAACAACACTCGAGGATGCATTGCGAAAAGCCAAAGAATGGTTGGCCACTGTGGAAATTTTACAAGCCAATGAAAATTATCCATATTTCCATACATTGGAAAATGTGGTGAATCGTGgcaaaaatattccattccAATTGGAAGAACTGAAAAGAATGGAAGAACATTTGACCAGTGCCAGAGCATGGAAACAACGGACCAGCCGAACGTTTCTAAAACGAAATAGTTTCTTGGAATTACTTGAAGTATTATCGCCGCGTGCAAAACCAATCATGTTGGTATCAAATGTTGGCAATTCGGCCGAAAAATTGAGCAACACCACATCAAAAACGTGTGctatttatgatgaaaaacaatttactgAAGACATGGGACCAGCACAAATGGTTGTTGCCTTTAAAAATGCCGAAGAAAAAGAGTTGAATGACATGCGCGAATTGCGCGAAggtaatcaaaataaaaatcccgAAAAGGATAAATATTGTGTGTGTCATCAGCCGTTTCGCGGTGTTATGTACAAATGTCAACTGTGCCTCGATTGGTTTCATGCCGGTTGCGTGCGAAATTATCCAAATACATGTACAAGTAATTCAGCAAATAATACACCCAccaaacaaaatcgaaatgcaACCACATCAAATCAAGCACCAAATGTCATATTAGCGCCATTAACCGGTCGAGCACGAGATCGCGAACCAAAATACCTCTGTGAATCATGTCAACGATCAAAACGACCGCGCCTCGAAACGATTCTAACATTACTTGTGTCTTTGCAAAAGCTACCAATACGATTACCAGAAGGCGAAGCACTTCAATGTCTCACCGAACGTGCAATGAATTGGCAAGATCGGGCCAGACAAATACTTGAAACGGCCGAAGTCGTAAATGCACTCGCTgtaatacaaaaacaacagaatCCTAGCGAATCGAAAAATGATGTAAACGAACCAAGGGATGTCGAACACGCATATTCGTTCCCAGTTGatatatcaataaattcaacatcATCCGCTACTACAGCCGGCGCAAATGCAACGGTACAAAAACCATCATCCGCACAactttttatcaacaaatcaaCGATCAGTCCATTGATTCAACCACAAAAATCAACCATGGATAAAATTGATGAGCTGATGATGGAAGGTGATCTCCTAGAAGTGTCTTTAGATGAAACAGTATATTTATGGCGTCTATATAATGCATCTAAACCTGACATTACCGATTTGGCTTTAATACGTTCCAAGTATAATATTATGCCTCAAGTGAATGAAGCTCTAGTCAGTAACATTAGAAAACGGCATTCAGATGAACACCAAAACGATGCCTTTTTGAAAAAGTCAAGAATGCGTGGTAATGATTATCAGTCAATTGAACAAAGACTAACGAGGCAGCGAATATcagacgatgatgatgataatgaagaCGATGATGATATGGAAGATATTGCAAACTTTGAAAATGAACTATCACGTAACGACGAATTAGctgatttaaataataaagtacccgcacaaaaaccaaaacgtGGTCGTAAAATGACAATGACCACAAAAGATGCCGATGCAATGTGCACAACAATTGAAGAAAGTACAACGATTATAAATGACAATtctcaattaaatttgaacactaaaaagaaaaagcgcGGCCGCAAGAGTAtcacaaatcaaacaaaacagGAAGCAAATTCGAAAGATGATGTTAGAAATGTTGTAACCGCCTCAACATccgatgaagatgaagaatgtAGTTTTGCGAATTGCATTCGTCCAACAGGTCGTGAAGTGGATTGGGTACAATGTGATGGTGGCTGTAATGAATGGTTTCATATGTTATGCGTTGGTTTGGTAAAAAGTCAAATGAAACCAGACGatgaattcatttgtaaaaaatgcaaaagtaAAAAGACAACAAATCCAGCCACAACAAATTTGAGCAACGCATCGAAAAAACTTAAATCACACGCATTAAATGCTAATGGCAGTGGGACGGCAGCTAATGGAAATGGAACAACAACTGCTACCAAAAAGCGTTTGACACGATCAAAAGATGATGGAAATCGTGAAAAATCCACcgttacaaatacaaatgaaaatttagtGGATAATTCAAAAGAGAATGATCATAGGCCAAATATTAGCGCTactaaaagtgaaaaaagtgatAGTCAACAAATAAGCACATCACGACCAAAGgCTGTTGTTTGTGATGGACCACCATCATATGCTTGCCGAATGGTGCTAAAGGCTTTGAATATTCCATGTGAATTGGTCTCAATTAATTATAATGAAGGAGAGCACTTAActgatgaatattttatgTTGAATCCACAAAAGGAGATTCCAGTTCTTGATGACAATGGCTTTATACTAAGTGAAAGTATTGCAATTATGCAGTATTTATGTGATCAATATGCACctgaaaatccaatttatccaaaggaagcgaaaaaaaagagcattaGTTAA
Protein Sequence
MQINSIESSKSTKTEPIETIDLDDSPSKNDVISVSSQESDTKTSPANPQTSTSVSASAFASSSSRPIIAQSARQSHSSFSIIKNEEFEFEVPEEAPTFIPNEQEFKNPLTYISKIRPMAEKYGICKIRPPPTWQPPFTVDVDKLRFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYSLHRLVQEEGGLEASTNGRKWSKIASRMGYPVGKSVGTILKGHYERILFPFDVFTSGKGGELKPKLESDSDDHDYKPHGIPSRQNVTPPTETTARRSQRFIVKSEIKSDDECDDTDESVKSTKRVTPQKNGDNKLGSASDAAANTAATARAELRRLQIYGAGPKMPGIKSKSGQQSNQTTPTKSRMNGSNNSRQQRQQTNRRNHADPLAKYICHICTRGDGEEAMLLCDGCDDSYHTFCLIPPLADIPKGDWRCPKCVVEEVSKPVEAFGFEQAQREYTLQQFGEMADQFKADYFNIPVHLVPTELVEREFWRIVSSIDEDVAVEYGADLHTMDHGSGFPTKNSLYLLPGDLEYADSSWNLNNLPLLEESVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAEAFENTMRSAAPELFQSQPDLLHQLVTIMNPNTLMHAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWIKMGRECINHYSNLRRFCVFSHDELVCKMALDPDKLNLGIATACYLDMAEMVDTEKKLRKCLLEWGVTKAEREAFELIPDDERQCDVCKTTCFLSAVTCTCVKSLVCLRHYSELCKCAPEKHTLKYRYTLDELPLMLRKLKVKAESFETWITKVRDVLDPTTPTTMTLDELQELAQEAEDKKFPSSVLLERLNSAVLEAEKCVTVIQQLDINKVRTRTRNSSCEIAKYKLTIEELDMFVQEIDNLCCVIKEGSSVRELQQIGKEFAELATYLLKEPISEIKESAVEKMIEEGSALCIELQQMKPLKALLEKVKWYNNVREIREADEKIPLDVIKKLLTDGNALSVVGELDDTLVQQELQDLQSVLMDIEEWEADSKKCFESGTQHDIPEIEELLNRASSIEGELPSQTTLEDALRKAKEWLATVEILQANENYPYFHTLENVVNRGKNIPFQLEELKRMEEHLTSARAWKQRTSRTFLKRNSFLELLEVLSPRAKPIMLVSNVGNSAEKLSNTTSKTCAIYDEKQFTEDMGPAQMVVAFKNAEEKELNDMRELREGNQNKNPEKDKYCVCHQPFRGVMYKCQLCLDWFHAGCVRNYPNTCTSNSANNTPTKQNRNATTSNQAPNVILAPLTGRARDREPKYLCESCQRSKRPRLETILTLLVSLQKLPIRLPEGEALQCLTERAMNWQDRARQILETAEVVNALAVIQKQQNPSESKNDVNEPRDVEHAYSFPVDISINSTSSATTAGANATVQKPSSAQLFINKSTISPLIQPQKSTMDKIDELMMEGDLLEVSLDETVYLWRLYNASKPDITDLALIRSKYNIMPQVNEALVSNIRKRHSDEHQNDAFLKKSRMRGNDYQSIEQRLTRQRISDDDDDNEDDDDMEDIANFENELSRNDELADLNNKVPAQKPKRGRKMTMTTKDADAMCTTIEESTTIINDNSQLNLNTKKKKRGRKSITNQTKQEANSKDDVRNVVTASTSDEDEECSFANCIRPTGREVDWVQCDGGCNEWFHMLCVGLVKSQMKPDDEFICKKCKSKKTTNPATTNLSNASKKLKSHALNANGSGTAANGNGTTTATKKRLTRSKDDGNREKSTVTNTNENLVDNSKENDHRPNISATKSEKSDSQQISTSRPKAVVCDGPPSYACRMVLKALNIPCELVSINYNEGEHLTDEYFMLNPQKEIPVLDDNGFILSESIAIMQYLCDQYAPENPIYPKEAKKKSIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-