Qclu005405.1
Basic Information
- Insect
- Quadriops clusia
- Gene Symbol
- stc
- Assembly
- GCA_033557875.1
- Location
- JAWQRP010001254.1:5063-16662[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 3 3.4e+04 -4.1 1.6 15 19 374 378 373 378 0.81 2 13 3.5e-05 0.39 11.7 16.9 3 18 421 436 409 437 0.88 3 13 2.2e-08 0.00025 21.9 10.7 1 19 473 491 473 491 0.98 4 13 2.6e-10 2.9e-06 28.1 11.1 1 19 531 549 531 549 0.98 5 13 8.9e-06 0.1 13.6 12.6 4 19 596 611 589 611 0.86 6 13 3 3.4e+04 -4.4 1.6 5 10 640 645 640 645 0.90 7 13 0.89 1e+04 -2.4 12.0 1 11 651 661 651 662 0.92 8 13 1.9e-10 2.2e-06 28.5 12.3 1 19 678 696 678 696 0.98 9 13 3 3.4e+04 -4.8 1.5 6 10 725 729 724 729 0.73 10 13 0.0034 38 5.3 11.8 1 19 735 752 735 752 0.76 11 13 0.85 9.6e+03 -2.4 3.4 9 18 770 782 769 783 0.71 12 13 1.6e-07 0.0017 19.2 18.3 1 19 788 807 788 810 0.96 13 13 0.031 3.5e+02 2.2 15.6 1 19 817 836 817 836 0.93
Sequence Information
- Coding Sequence
- ATGTCCCGTTGGGACCCCAATCAAGCTCCTCCTCACGAGGGGTTTCAATACTTTGACCAAAACTACGGCAATTCTCCGATTTACTATAACGTAGCCAACAATTTTGATAACTATTCCACCTATTACACACCGCAACAATATGCTCAAAATTTCAACCAAGGTTCCCTGAGCTACTTCGGGGGCCAACAGTTCTTTAACGGTAACGATAACCCCACATCACTAAGTAACGAAATTACTCAGGGTTCTACATTCCAAAGGCTGAATCTTAACGATAGCAATGCAAGACAGGGTAATATGTCGTTGGCCCAAGCGAGCACTTCCGCTACTCAGAGGGATTCGGTTGGATCGGGAGTAACCTCTTCTAAAGCGAGCTTGTCGAACTTGACTCCAACGGCGAAGGTGTTTCAACCAAGTGTTAGAGTTAGCGAGAGTAGCTCGCAGGCACAGTTGAATCAAAACCAAGGTGCTATCAAGAGAGACCAAAACTTTAgacgaaataaatatgtaggtgATCAAAACCAGAGTGGTTCTACCTTCAGAAATGGAAGTAGCAGAGGCATTTGGCATAATAAGTCTGCTGGACCGAATGATCACAAGAGAGATGGGTACTATGAAGAGAAGGGGAAaaatagAAGAGAAGATAGATCTTATAGAAACCAGTATAGTAATGAGAGTAATGTTAGGAATTATGGTGAAGGTAGAGGTAAAAGTGATAGGGATAGATATAATTCTAAGGATACtaataagtacaataatgaAAAGCAGGATAGCGAGAGAAAACACAACTTCAAAGAAGAGAAAGTGCAAGAAGATAGGAAGGAAAGGATCTATAAGGACAATTGGAGGAGTAATAGCTTAAAATCTGTGAGCGCTAAGAATGAGAAGAAAGAGAACGATTATTTTGAGAAGAAAACTGAGTTAAGAAAGAAatTGGATGCCGCTTCCCAAAGAGAACGCTTAGAAGAAATGGTAAACCGAAGGCTATTAGAATGCTTAGTCTGCTGCGAAGGTATCCGTCATGCAGATGAAATATGGTCATGCAAGCAATGTTACCATATCCTTCATCTAACATGCGTTATTCGCTGGGCTAAGACTTCCAAACTAGATACTGGATGGCGATGTCCTGCTTgtcaaaacattaataatagcaTTCCCACTGAATATCGATGCTTTTGCGGAAAGACTTTACGACCAGTTTTAGAACCGGGAACGACCCCTCACAGCTGTGGAGAAATGTGTGGTCGGAAGGGTAGATCATGTGATCACACTTGCACCCTTCTGTGCCATCCAGGGCCTTGCCCGGATTGTGCCGTTATGGTTAAAAGGAGTTGCAATTGTGGTGCGACGACAATGCTCGCCTTGTGCAGCGCAATATTTGATTTGGTCTGCAAGAATACATGCAATAAGGAGCTCGACTGTGGAATGCATAAATGTGAAAAAGTCTGCCATGCGAAGGATTGTGAACCTTGCTCGAAATTTATCAGACAAGAATGCTATTGCGGGAAAGTGGGACGGAAAGTTAGGTGCACACGGGAAGTTGCTGGAATGAAAGCATACGAATGCGGAGACCTATGCGGAAAGAAGTTGGATTGTGGAAACCATTACTGCCAAATGCTCTGCCATGCAGGGCCATGTGATCCTTGCAAGGTAGCCCCAAGTCGAATTAGTTTTTGCCCTTGTGGGCAAACGAAGCTTGTTGAAAGACGAACCTCGTGCCTTGATCCTATACCTTGTTGTGATAAGACTTGTAATAAACCTTTAAAATGTGGCCAACCCAGTATGCCGCATCTGTGCAAAAGCAAATGTCATGAAGGACCATGTCTTCCTTGTTCTCTGACTACTTTAGTACGGTGTCGTTGTGGTCATATGGATCGTGAAATCAAATGTACTGAATTAAAGACTAAAGCTGATGATGCTAGATGTGAGAAGAGATGTACAAAGAAAAGACAATGCTGCAAACACAAATGCAACCAATTGTGCTGTATCGACATAGACCACGTCTGCCCCCTCATTTGCAATCACATGCTTTCCTGCGGCCTCCATCGTTGTGAAGAGACTTGCCATCGGGGAAGATGTCCCCCTTGCTGGCGCACCAGTTTCCAAGAATTATTTTGTGAATGCGGATCAAGTGTGCTCTACCCGCCAGTAGCGTGTGGAACAAGACCTCCGCCATGCACAAAACCTTGCTCAAGGCGTCGGGAATGTGGGCATGATGTAAATCACAACTGCCACACGGGGTCTTGTCCTCCTTGCACAATTTTAACGGCCCGTTGGTGTTACGGAAATCATGAGCAGCGACGCACTATCCCCTGCCATCAAGGAAACTTTAGCTGTGGATTGCCTTGTGGCAAAGAAATGGCTTGCGGAAGGCATAAATGCATACAACCTTGCCATACCGGAGCCTGTCCTTCTCCCTGTACTCAACCTTGCACAACGCAACGAGAAGCTTGTTCTCATCCTTGCAATGCTCCATGCCATAATCCTCCTTGTCCCGATACTCCTTGTAAGCAGATTGTAAAGGTAACTTGCCAATGCGGACTTCGGTCGAGCTCAAGGACTTGCATGGATCTGGCGGGCGAATATCAGAAGATTGCGATGAGTCAATTAGCATCAAAGATAGCTGACATCCAGAGGGGGCAGACAGTAGATATCTCGGATATCGTCAGCAATCAGAAGAAACCAAGCACTTTGAAAACgTTGGAATGTAACGAAGAATGTAGGATAGTGGAGCGAAACCGTCGCCTCACCATAGGTCTCCAAATCCGCAATCCGGACCTTAGCTCAAAGCTGATGCCCAAGTACTCAGAGTACATGAAACAATGGGCGAAAAAGGATGGTCGTTTCTGTCAAATGGTGCACGACAAGTTGACTGAGTTGGTTCAATTGGCTAAGACTAGCAAGCACAAGAGTCGATCGCATTCCTTCGAAACCATGAACCGTGATAAAAGACAATTCGTTCATGAATACTGCACATATTTTGGTTGCTCCAGCGCTGCGTACGATGCCGAGCCTAACCGAAATGTCGTAGCAACTGCCATGAAAGAAACTTCTTGGTTGCCCAGTTTAAGCTTGTTGGAAGTAATTCAGAGAGAAAATGGACAGCGTAAAGTACCAGGGCCGGTTCTAGCGAAAAGCGTAGCCGGAAAGTCGGAGAGTGTTTCTCTCAACAAACTTCCTGGACGAGTGCAAAGGCCACCTACGCCTCCAGGGGAGTATGTCGACTATTTCGATAATCCTCCTACATAA
- Protein Sequence
- MSRWDPNQAPPHEGFQYFDQNYGNSPIYYNVANNFDNYSTYYTPQQYAQNFNQGSLSYFGGQQFFNGNDNPTSLSNEITQGSTFQRLNLNDSNARQGNMSLAQASTSATQRDSVGSGVTSSKASLSNLTPTAKVFQPSVRVSESSSQAQLNQNQGAIKRDQNFRRNKYVGDQNQSGSTFRNGSSRGIWHNKSAGPNDHKRDGYYEEKGKNRREDRSYRNQYSNESNVRNYGEGRGKSDRDRYNSKDTNKYNNEKQDSERKHNFKEEKVQEDRKERIYKDNWRSNSLKSVSAKNEKKENDYFEKKTELRKKLDAASQRERLEEMVNRRLLECLVCCEGIRHADEIWSCKQCYHILHLTCVIRWAKTSKLDTGWRCPACQNINNSIPTEYRCFCGKTLRPVLEPGTTPHSCGEMCGRKGRSCDHTCTLLCHPGPCPDCAVMVKRSCNCGATTMLALCSAIFDLVCKNTCNKELDCGMHKCEKVCHAKDCEPCSKFIRQECYCGKVGRKVRCTREVAGMKAYECGDLCGKKLDCGNHYCQMLCHAGPCDPCKVAPSRISFCPCGQTKLVERRTSCLDPIPCCDKTCNKPLKCGQPSMPHLCKSKCHEGPCLPCSLTTLVRCRCGHMDREIKCTELKTKADDARCEKRCTKKRQCCKHKCNQLCCIDIDHVCPLICNHMLSCGLHRCEETCHRGRCPPCWRTSFQELFCECGSSVLYPPVACGTRPPPCTKPCSRRRECGHDVNHNCHTGSCPPCTILTARWCYGNHEQRRTIPCHQGNFSCGLPCGKEMACGRHKCIQPCHTGACPSPCTQPCTTQREACSHPCNAPCHNPPCPDTPCKQIVKVTCQCGLRSSSRTCMDLAGEYQKIAMSQLASKIADIQRGQTVDISDIVSNQKKPSTLKTLECNEECRIVERNRRLTIGLQIRNPDLSSKLMPKYSEYMKQWAKKDGRFCQMVHDKLTELVQLAKTSKHKSRSHSFETMNRDKRQFVHEYCTYFGCSSAAYDAEPNRNVVATAMKETSWLPSLSLLEVIQRENGQRKVPGPVLAKSVAGKSESVSLNKLPGRVQRPPTPPGEYVDYFDNPPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -