Basic Information

Insect: Quadriops clusia
Gene Symbol: RREB1
Assembly: GCA_033557875.1
Location: JAWQRP010000801.1:17544-22554[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0016 0.13 13.6 1.2 1 23 66 88 66 88 0.96

2 15 0.00031 0.026 15.9 0.4 1 23 100 122 100 122 0.98

3 15 4.2e-05 0.0035 18.6 4.4 1 23 128 150 128 150 0.99

4 15 0.049 4.1 8.9 3.9 2 21 249 268 249 271 0.85

5 15 2.1 1.7e+02 3.8 1.5 1 19 318 336 318 339 0.81

6 15 0.84 69 5.1 0.1 1 23 482 504 482 504 0.96

7 15 2.4e-05 0.002 19.4 0.8 1 23 513 535 513 535 0.99

8 15 0.0012 0.1 14.0 3.1 1 23 541 564 541 564 0.97

9 15 0.001 0.086 14.2 2.8 1 23 977 1000 977 1000 0.96

10 15 0.00072 0.06 14.7 0.4 2 23 1237 1258 1236 1258 0.97

11 15 0.18 15 7.1 6.3 1 23 1264 1287 1264 1287 0.97

12 15 0.13 11 7.6 5.0 1 20 1316 1336 1316 1340 0.95

13 15 0.16 13 7.4 0.6 1 23 1400 1423 1400 1423 0.96

14 15 0.024 2 9.9 0.4 3 23 1470 1490 1468 1490 0.93

15 15 0.011 0.91 11.0 5.9 1 23 1496 1518 1496 1518 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0016	0.13	13.6	1.2	1	23	66	88	66	88	0.96
2	15	0.00031	0.026	15.9	0.4	1	23	100	122	100	122	0.98
3	15	4.2e-05	0.0035	18.6	4.4	1	23	128	150	128	150	0.99
4	15	0.049	4.1	8.9	3.9	2	21	249	268	249	271	0.85
5	15	2.1	1.7e+02	3.8	1.5	1	19	318	336	318	339	0.81
6	15	0.84	69	5.1	0.1	1	23	482	504	482	504	0.96
7	15	2.4e-05	0.002	19.4	0.8	1	23	513	535	513	535	0.99
8	15	0.0012	0.1	14.0	3.1	1	23	541	564	541	564	0.97
9	15	0.001	0.086	14.2	2.8	1	23	977	1000	977	1000	0.96
10	15	0.00072	0.06	14.7	0.4	2	23	1237	1258	1236	1258	0.97
11	15	0.18	15	7.1	6.3	1	23	1264	1287	1264	1287	0.97
12	15	0.13	11	7.6	5.0	1	20	1316	1336	1316	1340	0.95
13	15	0.16	13	7.4	0.6	1	23	1400	1423	1400	1423	0.96
14	15	0.024	2	9.9	0.4	3	23	1470	1490	1468	1490	0.93
15	15	0.011	0.91	11.0	5.9	1	23	1496	1518	1496	1518	0.98

Sequence Information

Coding Sequence: ATGGACATGACAACGGAACAGCGGCTCTCAACCAAAGAAACCTCAAACCAAAGCACCAGAAGCGACTCAGGAATATTCTCAGCCACCGGCAACAGCACTTTTCCCGAAGAAGCCGTGGATATCTCGAATAGAACGAATCACTCCGAGAGTGGAGACACGGATAACAGGAGCGATTGCAGTTCGCCAGATCGCAAGTACCTTTGTCCCATTTGCGAGAAAATGATGACCTCTCAACACGAATTTACTCTGCACATTAGGTCTCACAACAACAACGGCGTAGAGGACGCAGACAAAGGATTCACTTGCCAAATTTGTTTCAAGGTCCTGAGTTCCAGCTCCAGTTTGGACAGGCACGTGCTTGTCCATTCCGGTGAACGGCCTTTCACCTGTAAGTTTTGCGGGGATACGTTTACGACGAATGGGAATATGCACCGGCACATGAGGACCCACGTTGCTAAGAATGATAACTACGAGTCGGATGGAAGCAGTGATAGCAATGGAAGCTCCAGCTCGAAAATCGTCgaatacaacaacaacaagatTGTGAGCAAAACCGATTTGTACGAGAGTGGAAAGAAGAGAAAGCTAGAAACCATCGAAGAATCGGGGAAGAGGTTCAAGGAAGCCTTTGACGAAGAAGGCGATGGCTACGGCATCAAATGCCCGGTTTGTGATCGCGAAGACTTCTCCTCGTTAAACATCTTAGAAATACACCTTCAAGACAACCATCCTGATTACCCCGCGAAATGCAACCAATGCGGCCAAATGTTCAAGAACAACAAACACCTGAACTTCCACAAGGTCTCTTTCCACAGCGACGACAACGGCAAGAAGAACTGCATCGTCGGCTTCAAAGATTTGACCTTCATGGACTTTTCCAGCGAAAAGTTCGCCCAGATCGCTCGCGTAGAGTGCGAGAGGAATTTTCACAAAACAACGGGAACCCCTAAATTTGTATGTCACAAGTGCTCGCGTGCTTTTCCTTGCGCCAACTCCTTGGACATTCACAAGAAGGATTGCTGCGTCGGCCTCGACTTAACCCTACCCAACGAAAACTCCTTAGATCTAAGCAAAAATACCAACGACGGCGACTTGCGTAGAGCCGATTTTTTCGCACGCTTAGATCTTCAGAACAGCTCCCCCGAAAGGAACCAAACTGTGCCACAAATTCCCGAATCGGAACCCTCGCCCACTAGACTGCAACAAAGATTCCTGGAAAGAGCCATGAAAACCATCGATAACAGCAAAGACTTAGCTGACATCCAATCAATAATCTCCATGACAACCAACGGAAGCCTCCTCCAACAACTTCAGGCAAAGACCAATGAATTACCCGTGCTGCCGAATCACGTCAACAACCACCACGATAACTCCAAAaccgaagaagaagaagcacAAGACCTCTTCACGGCAGAATTCCGAAAAATGAAGCTCCGAGGAGAATTCCCGTGTAGACTGTGCAGCTCAATATTTCCCAACTTAAGAGCACTCAAGGGACACAACAGGGCCCATTTGAACACCGGTAACACCAGCACATACAGGTGCAACATGTGCCCGCATACTTCCATCGACAAAGCCGCCCTTGTCCGCCACATGAGAACCCACAATGGAGATCGCCCGTACGAATGCTCCCTCTGCAACTACGCCTTCACCACAAAAGCAAATTGCGAGAGACACTTACGCAACCGCCACGCCAAAACAACCAGAGAGGAAGTCAAAAAGGCCATAATCTACCACCCATCCGAAGACCCCACTAACGACGAAATAACCAAGCTCACCGGAAAGGACGACTTGAAAAAGATGAACACCAGCATCCACAGCGACTCCAGCGACATAACACCTGAAAAACTCCGAAGTTCAACCCCGAAAGTATTCGATCTCCACCCGCCCTTGCCCAAACTACCAGAAGACACCCATCCAGACTTCAACTCCCTCCTCCCATTACAAGCTAAACTGCAAGCTCTAAAAGACCAATCCAAAACTTACCCGAACGTGAACGAAATCATTTACAAAGAAAACTTGAAATCGCTCAAAGAGCACAGATTAGCCAAAGCCGGCCATCACTCTCCATATTTACAAACAGCTCAATTTACCCCAAATTACATAAACACTTCCACCCCCCAATCGAAAATCCACGTAAAGAGCTTGGAACTCTTGAAGCAACCGCCAGTTGAATACGACGACCACTCAGAAGAAGAAGATTACCACAACGACTCAAGTTATCAACAGCAAGAGGACGACCAACCACTCGATCTCGTCCTAGACTTAAGCAAGAAAAAGTCGGATAAAGACGAAGAAATAAAGGCCCCCAACATTCCCGAAGATTTAAGTAGAAAGTATCCGCCTGAACTTCCACCTCAAAACGTAAACGAAATCCTCCAGCAGCAATTAATGAAAAACTCTCCGAAATTCGACACGGCTTCTTTGTACGCCTCCCATTTAGCCATGGCTTACCGCAATAGCTTCCCAGCACTGGGCGCCTTACCAAATTGGCCCGGCTTCCCAATCAACCCTTTACTGTTCCAAACAATGCAAAACCCTCTCATACCGCAAGATGCCCAAGAAATGAAAGAGAGGCTGCAAAGGTTTCAAATGTGCGGTGGAAGTATGATCGTCGACAACTTTGCGGAACAACTGAAGAGTTTCCATCAGCAAAATTCCAATTTCAACAAACTAAATGACTTAAAGCCAGAACTTAAATTTTCTGACACAAAGTATTCCTTGGGCACACCCATCAAACCCGATGATATAAAACCTTTGTCTTTAAACATAGATCAAAGCTACCccgacaatttaaataaactacaaaGCCCAATCCCCCAGTCAAAGCCAGATTTAATCCAATCGCCCAATTCCGTGAAGATGGTCATTAAAAATGGCGTCTTGATGCCCAAGCAAAAACAGAGAAGATACCGCACTGAGCGACCATTCTCATGTGAACATTGCTCAGCAAGATTCACTCTAAGATCTAACATGGAGAGACACATCAAGCAACAACACCCTCAATATTGGTCGCAAAGACAAAGATCGAACATTGGAACGCCAGGTCGCAAGAGCCAAACACTTCCCCCGAACGTCAAGAGCCTTTGCGAGCTGACCATACCAAATTacgacgtaccaaagattcaCGATTATGAAGATACCAAAGATCAAATTTCCGACAACCTGAAATACGCAATCCTCGCGCAACATCTTCGCCATGCAACCCAAGAAGTGACCAAGAAGGAAGACGATGACGATTGCGCCCTAGTCATAGATGAGAAAGATGAAAACAGAAACGAAACTAAGACTGAAGACCACAACGAAGGCACCAAAGACGACAACGCCTTTGAAAATATGTGCAAAACTCGAATTTTGGAAGACAAACTAAAGGAACTCCACGCCAAGCAAATGTACGAGACGTTGCAAAATGAATTCGTTGCCCCGAAAATTCAATCGAAGAACGAAGAAGCCGCCCAAGATCTCGTCCCAGTTTCTAGGTTGCTGGACAATGCCTCCCAACAGCAATTTAAGGAGTATTTTCGCAGGGATGCTGAAGAACACGATGCTGGGGTGAGTGAGGAAGATGAAGAAGGCTTGGTGGCCAGCGGAAGTACCAGTGAAGGAAACAATTCTGGAACTGACGAAAACAAATCTGAATCAGAAGTAACTACTGCTCAAGGACTCGTCAAGAAAAAGTCAGCCTATTCATTAGCACCAAACCGTGTCAGCTGCCCATACTGCAGCCGCAAATTCCCATGGACATCCTCTTTGAGGAGGCACATTCTAACACACACCGGTCAAAAACCCTTCAAATGTAGCCACTGCCCCTTGCTTTTCACCACAAAATCCAACTGCGACCGCCACCTGTTGAGGAAGCATGGGAACAGTGCCACGACCATCAGCAACGACTCGCAGGCGAACAACAACTCGAATTACTTGATGAGGAACGTCCCGGAGCGGCCCTTCAAATGCTCAACCTGCCCGAGCAGCACCTTCAGCACTTATTCAAATCTCAAGAAACACATGAGCTGCAAGCATAGCGGCCAAGGTGATGAACTTCAAGCCAAAGGGTACGAGGCTGGCAGTTCCGAAGACGAGAAGATCCCCCAGAACGACCACAAGAGCGACTGGGACAATCAAATATCCCAAGGAAAAGCAGCACAAAACAGCGAAAGCCAAAGCACTCAAATTCAACAACAAAACTCCGACCTGCCATTCAAGTGCCACCTTTGCGAAGGCTCCTTCGGAGATCGCCAGGATGCTCTAGACCACATCAGGGACAAACATTCCTCAGAATACGATCTCCTCATGGCCAAAAATGCATTAGACAATAGCTCTTCCACTCCAGATGAGAGCAATCACCATGACGACGAAGAAACTGACATACGAGGAAAATTTCCAGACTATTCAAACCGAAAAGTGATTTGCGCATTTTGTATGAGACGTTTCTGGTCAGCGGAGGATCTAAGAAGGCACATGAGAACCCATACGGGTGAACGCCCTTTCAGTTGTGACATCTGCAGACGTCGCTTCACTCTAAAGCACAGCATGCTGCGACACCGAAAGAAACACACCATTGGGATGGAAAACGATAATGCCAACAACAGTGACGAAGACATGAACAACTTGAATCCAGCTTACGACAAGATTATGAACAACGAAAACAACAACACAACGAAAACCAgcgaaaaagaagaaagtgaTGGAAACGAAGGAGGCGGAGACCTAATCAGCAACCTCTTGGGCATCCGAGACCGGTCAATCATCGACCAAGTCTTAACTGCAAGTGCAGATGACGCAGCCAAACTGCTGGGAGTCAAAAACGGACAGGAATAA
Protein Sequence: MDMTTEQRLSTKETSNQSTRSDSGIFSATGNSTFPEEAVDISNRTNHSESGDTDNRSDCSSPDRKYLCPICEKMMTSQHEFTLHIRSHNNNGVEDADKGFTCQICFKVLSSSSSLDRHVLVHSGERPFTCKFCGDTFTTNGNMHRHMRTHVAKNDNYESDGSSDSNGSSSSKIVEYNNNKIVSKTDLYESGKKRKLETIEESGKRFKEAFDEEGDGYGIKCPVCDREDFSSLNILEIHLQDNHPDYPAKCNQCGQMFKNNKHLNFHKVSFHSDDNGKKNCIVGFKDLTFMDFSSEKFAQIARVECERNFHKTTGTPKFVCHKCSRAFPCANSLDIHKKDCCVGLDLTLPNENSLDLSKNTNDGDLRRADFFARLDLQNSSPERNQTVPQIPESEPSPTRLQQRFLERAMKTIDNSKDLADIQSIISMTTNGSLLQQLQAKTNELPVLPNHVNNHHDNSKTEEEEAQDLFTAEFRKMKLRGEFPCRLCSSIFPNLRALKGHNRAHLNTGNTSTYRCNMCPHTSIDKAALVRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAKTTREEVKKAIIYHPSEDPTNDEITKLTGKDDLKKMNTSIHSDSSDITPEKLRSSTPKVFDLHPPLPKLPEDTHPDFNSLLPLQAKLQALKDQSKTYPNVNEIIYKENLKSLKEHRLAKAGHHSPYLQTAQFTPNYINTSTPQSKIHVKSLELLKQPPVEYDDHSEEEDYHNDSSYQQQEDDQPLDLVLDLSKKKSDKDEEIKAPNIPEDLSRKYPPELPPQNVNEILQQQLMKNSPKFDTASLYASHLAMAYRNSFPALGALPNWPGFPINPLLFQTMQNPLIPQDAQEMKERLQRFQMCGGSMIVDNFAEQLKSFHQQNSNFNKLNDLKPELKFSDTKYSLGTPIKPDDIKPLSLNIDQSYPDNLNKLQSPIPQSKPDLIQSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQYWSQRQRSNIGTPGRKSQTLPPNVKSLCELTIPNYDVPKIHDYEDTKDQISDNLKYAILAQHLRHATQEVTKKEDDDDCALVIDEKDENRNETKTEDHNEGTKDDNAFENMCKTRILEDKLKELHAKQMYETLQNEFVAPKIQSKNEEAAQDLVPVSRLLDNASQQQFKEYFRRDAEEHDAGVSEEDEEGLVASGSTSEGNNSGTDENKSESEVTTAQGLVKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNSATTISNDSQANNNSNYLMRNVPERPFKCSTCPSSTFSTYSNLKKHMSCKHSGQGDELQAKGYEAGSSEDEKIPQNDHKSDWDNQISQGKAAQNSESQSTQIQQQNSDLPFKCHLCEGSFGDRQDALDHIRDKHSSEYDLLMAKNALDNSSSTPDESNHHDDEETDIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHTIGMENDNANNSDEDMNNLNPAYDKIMNNENNNTTKTSEKEESDGNEGGGDLISNLLGIRDRSIIDQVLTASADDAAKLLGVKNGQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -