Qclu005108.1
Basic Information
- Insect
- Quadriops clusia
- Gene Symbol
- Tulp4
- Assembly
- GCA_033557875.1
- Location
- JAWQRP010001154.1:275-14943[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00029 0.024 16.0 1.2 1 23 1284 1306 1284 1306 0.98 2 11 0.032 2.7 9.5 2.3 1 23 1326 1348 1326 1348 0.96 3 11 0.96 79 4.9 2.8 2 23 1353 1374 1352 1374 0.79 4 11 1.3 1e+02 4.5 0.3 1 23 1379 1402 1379 1402 0.95 5 11 0.3 25 6.5 4.1 1 12 1408 1419 1408 1422 0.92 6 11 0.00024 0.02 16.2 3.8 1 23 1437 1460 1437 1460 0.97 7 11 0.00056 0.046 15.1 1.1 1 23 1471 1493 1471 1493 0.98 8 11 3.6e-06 0.0003 22.0 0.2 1 23 1504 1526 1504 1526 0.96 9 11 0.00012 0.01 17.1 3.6 1 23 1532 1554 1532 1554 0.98 10 11 2.6e-08 2.1e-06 28.7 0.8 1 23 1560 1582 1560 1582 0.99 11 11 0.015 1.3 10.5 0.0 1 21 1588 1608 1588 1609 0.96
Sequence Information
- Coding Sequence
- ATGCACCTGCACTTCGAAAGGACTGTCAACGCGAAAAGCGATTGCTCTATTCTGTCCCTCACGTGGATGGGAAAAGTCCCAGATGAACTCCCCGaggatGAAGGATGGAAACTAAACAGAACAAATTATTACCAAGAAGGCTGGCTTGCTACCGGTAATATTCGAGGGATCGTTGGCGTGACTTTTACGACTAGTCACTGTAAGAAAAATGTTGACTTTCCATTACGTACAAACTACAATTTAAGGGGGCATCGTTCtgagGTGATATTAGTTAAATGGAATGAACCTTATCAAAAGTTGGCATCCTGTGATAGTTCCGGCATTATATTTGTTTGGATCAAGTACGAAGGACGATGGTCAATAGAGTTAATTAACGATAGAAACACTCCAGTCACCCATTTTTCATGGTCGCATGATGGAAGAATGGCCCTTATATGTTACCAAGACGGTTTCGTTCTTGTCGGTTCAGTAGCCGGCCAACGCTATTGGTCCTCGATGTTAAACCTAGAAGCAACAATAACATGTGGCATATGGACTCCCGATGACCAACAAGTTTATTTTGGCACGACGTCGGGACAAATTATCGTTATGGATGTCCATGGAGCGATGGTATCACAAGTGCAGTTAAGCTCGGAAGTCGGAATATCGTCGATGGCTTGGTCCTGCGAGAAATTCAAAATGGAAGAGGGGGATGATAACGATCCAGGTGTAACGAATGCAGctGAAAGAAAATTCGTGCTTGCTGTAAGCCTTCAAAATGGATACATCTACTTGTTGAAAACTTTCGATGATGTCTCTCCTATTCAAATCGATACAGGTCTTCAAGGGCCTTTATGCGTAGAATGGAGTAATTCCAGAGAACTGTTAGCCGTCGCTGGAATAACTTTAGAAAGCAAAAACAATGGGCCACAAATAGAATTCACTAATATgctgaaattttataatgaaaaggGCAAACTGATCTATTCGGTGATAATCCCGTTTACTCAGgCACCAGTTTCCGCAATCACTTGGGGCCATAACGATAAAAGGCTCTTCTTAGCGACAGGAACGCAGATTCATATTGCGTGGGTCTCGAGAAGAATAGCTACTCTGCAATTGTTGTGTCGTTTAAAAATTCACAATTCTCTTCAAAGCGACTCACAAATAGTGTCGTTGCCATTGCCTCCGAGAATAAGAGGACTTATTGGCAACTTATTTGCTCAAACTATAAGGTGTTGTGTTCCTGAACCAAGTGCATTAAGAGAATTCGTGTCGAGACCGCCTGTCGGATCGGTGAGACTGCATTGTACAATGATAAGGCACGACGAAGACAACAATTTATCATCGGGGACTTGCTACACGCTTTACTTGGAATACTTGGGCGGATTAGTGCCGTTGCTTAAAGGAAAACGTACTAGCAAAATTAGACCTGAATTTGTGATTTTCGATCCACAAGTCGAAGtTTTTAACATCCCAATTCAATTATCACCAGAATCTAAGAGTTCAGGATCGTCGAGCCACTCGACGAGTGGTGGAAACTTAGCGAGCGATTCGTCAGATAGCGACAGGGAAGAGGGATGCACAGGTTCACCCCGAATGCAAAGGAGAAGGAAGAAAAGGAACAAATCCCACACGAGGACACCTTACTCGGACAGACAATCAAGTTCAGGGGAAGCCGATCCCGAAGATTTGGCTTACGTCGATACGCTTCCGGAGCACGTTCGTTTGGTCGAGGTGACGTCGAATATCTGGGGCACGAAGTTTAAAATTCATGGTTTGGTGAATTCGGTGCCGGCGAACTTAGGGCAAGTTACTTATAAGACGTCTTTGCTACATCTGCAGCCGCGGCAGATGACCCTCGTTATGACGGAATTGAGGGACGACTTTCCCGTCGGTCCCGATCCTACTTTTAACCCGAATCTTTTCTCTGAAGATGAGGAAGATATTTCTGAGGAAAAATGTCGGCTCCGCAAGGTTTCCATAGAGAATAGTCCCCCGATAGCGCCGATGTCCCCGAGGGGAAACCGCTTGAGTCGACCGAAGCCGCAATTAGCTAGCAATTATCTTAATACCCACGGCGAGAGCAATTTAAGCAGGTTAGTGCCGGCTTTGGCGAAAGCGGAGTCGTACGACGACGAATTTCCGTACGTCGAGTTAACCGATGTGGTAAATTTCTGTGAAACAATCCGTCCTCATGCTTTGAGCAATGTCCCGATGAGCGCCCAGTCGAGGTCCAGCAATTCGCAAAACACCAGCTTCGTGGGTCACCGCGCCACCACAACGAACAGCAGCAGCCAAAGGCACGCCATTTCGCCGTTATGCTGCGAAGGATCCGTTCCAGCTTTGCAATCGCCGAAGAACGCCGTCGCGCCCAGCGATATCATATTCGATCGGCCGCCCGCGCAAACCATCATATCGTACACTTCGAGCGACTACGCCACGATAACCAACAACATCCAGCAGGTCAAATCGAACATGGTCGGCGAGCACAACCGAAACGGCATTTCGTTATCCTTGAACTTAAATTCCGATCAGCACAAGCAAATCGTCGTGAAGAAGGAAAAGACTATCAAGTCGAGTCCGAACAGCAACCAGATAGCGACGACCGCGAACAAGGAATTGTTGTACATCGACGAGGAACATCCGTCTGAAGCAACCCCGGGGCCTTCCACGAGCATTCGTCCGTCTCACTCGATATACCTTCCCGACTCGATGGTGCGCAGCTGCAGCGTCGGTTATTTAGATTTAGTTGACGCCCAGATGGTTCCCAGCGATGTCGCCCTGCTAATGCTCCGAAAGGACGCCCCCAAACGATTGGTGCTAGTGAACAGAAAAAACAAGCACAAAAGGATTCACAGGAAACAGGACAGGGACAAAGCGATCGTGCAGTCCCCCAAACTGAAAAACTGCGGCAAATCCAAAAGCCTCGACTCCAGCGACATATTCCCGTCTTGCGAGTCGAACACCATCAAAGTGAACGTCAAGAAGGAAATCATCCCCGAGGTCGTTgttcaaaacaaaaacgtaAGTGCTCCTTCGAACAACAACCCTCGCCAAACGTCTAGCTTGGAAGACAATATAgttatcaataacaataataacaataacacgAACAATAAGAAGGAAAAGCTCGGGTTTTTCATCTCGAAGTCGCCGCTGCTAAGAAGGAAGAAGTCAGAAGCGGAAAGCAACGTCATCAATGATAAATCGAGTAAGTCTAGGAGTAGAAGTAAGCAGAAAGGTTCATCTTCAAAGTCAAACACCGACGCAAGCCAGAATGCCGGGGTAAATAACTCTCGACCCGGATTATCCTTGCATACGCATGCATTGGCAACGTTGGAAAATTTGCTTACGAGGCTGAGGGAAGACGATGATAGGAAAACGCCTCCTCAAACACCTCGCCTTCCTAGGAGTTCACCGGCTTCGCCCGCTCCAAGTAAAAAAGgCAAAAGACCTCAATCAGCATCACCGATAAGAAAGAACATACTTTCATCTCCGCTTTTGGGGCGAAGGAACAGAAAAAGCAGAGCTCAGGAAAGCTCCGATGATGAAGTCGTAGCTTCTGGAGACGAGGTGTTTAACGGAACCAATTACAAAGACTTGGAGACATTCCAAAAGGCCCAGCTGCGCCAGAAGctaaaaagggGAAAAATTGAACCCAACGGAAGTAGTTGCAACAATCACCAGCATGTCCCTCAAAGAAGAGAGTTCGTAATGCATAATAAAGCTCCGATGTGGAATGAGAATAGCCAAGTTTATCAACTCGATTTTGGAGGACGGGTGACCCAAGAATCAGCgaagaattttcaaattgaatttcGAGGCAAACAGTTCCTATTATTGTACCCTCCTTGTAAGCCCAATACATACCCCTGCGAAGTATGTGGGACCATTTTCACCAATAAGAAACGTTGGAGATCGCACAAGAAGACGCACAAACCGTTTTTTGTCGAGACACCTCTCGAGTACAGTTTTAACAAAGATAAGAAAGTCTACGAATGCAAAACTTGCAAGATCGAGTGCAAGAACAAAGTGGACATGAAGAACCATTTGGACGAGCACCGCGAGGAAATTAGCTGTCCTTACTGCTCGAAGACCTTCAAAGGTCTTCATAAATGTGCCATCCACACTCTTGAGCACAACAAAGACTTCTACAGGTGTCCCCTTTGTGAGTTCAAGAACAGCGGTCGAGACAACATCATTAGACATATCGACAAAACTCATCTGAAGAAGTACAATTTCGTTTGCAAACACTGCGGCAAATGTTTCGCCAATGGTAAATTTCACGCAGAGCACGAAGAAAACCATTTGACCGACAATGTTAAGTTTCAATGTGTTGTCTGCAAGAAAATCTTCAAACACTCCAGTTATCTGCTTAACCACCAAACACGAAATCACAGGATAATCATCGAGGGGGTATTATCAAAGTTCCAATGCGATATCTGCCTTAAAGTACTCACGACATCAAAGCTTTTGGAAAATCATAAGAAACGGCACTCTTCCGATCGCAATcggaaagaaaagaaatatttgtgtGACATGTGCGGGAAAGGGTTCCCTCAATCTGATCAATTGAAGATCCATTACCGCGTCCATACCGGAGAAAAACCGTTTAGTTGTTTTCACTGTAGCAAGACTTTCGCCAAGAAGTCGTCTTTAGAGATGCATGAAAGAATTCACACGGGAGAAAAACCTTACAGTTGCGAATATTGCGGGAAGAGCTTCAACCAACCAACTTCGTTGAAAATTCACATCAGAACACACACAGGAGAAAAACCTTACGTTTGTCGCTTGTGCGGCAAAGGATCTGCGACAAATGGGGCCATGAAGTTGCACATGAAGTCCTGTCGTGTAATTGATTAG
- Protein Sequence
- MHLHFERTVNAKSDCSILSLTWMGKVPDELPEDEGWKLNRTNYYQEGWLATGNIRGIVGVTFTTSHCKKNVDFPLRTNYNLRGHRSEVILVKWNEPYQKLASCDSSGIIFVWIKYEGRWSIELINDRNTPVTHFSWSHDGRMALICYQDGFVLVGSVAGQRYWSSMLNLEATITCGIWTPDDQQVYFGTTSGQIIVMDVHGAMVSQVQLSSEVGISSMAWSCEKFKMEEGDDNDPGVTNAAERKFVLAVSLQNGYIYLLKTFDDVSPIQIDTGLQGPLCVEWSNSRELLAVAGITLESKNNGPQIEFTNMLKFYNEKGKLIYSVIIPFTQAPVSAITWGHNDKRLFLATGTQIHIAWVSRRIATLQLLCRLKIHNSLQSDSQIVSLPLPPRIRGLIGNLFAQTIRCCVPEPSALREFVSRPPVGSVRLHCTMIRHDEDNNLSSGTCYTLYLEYLGGLVPLLKGKRTSKIRPEFVIFDPQVEVFNIPIQLSPESKSSGSSSHSTSGGNLASDSSDSDREEGCTGSPRMQRRRKKRNKSHTRTPYSDRQSSSGEADPEDLAYVDTLPEHVRLVEVTSNIWGTKFKIHGLVNSVPANLGQVTYKTSLLHLQPRQMTLVMTELRDDFPVGPDPTFNPNLFSEDEEDISEEKCRLRKVSIENSPPIAPMSPRGNRLSRPKPQLASNYLNTHGESNLSRLVPALAKAESYDDEFPYVELTDVVNFCETIRPHALSNVPMSAQSRSSNSQNTSFVGHRATTTNSSSQRHAISPLCCEGSVPALQSPKNAVAPSDIIFDRPPAQTIISYTSSDYATITNNIQQVKSNMVGEHNRNGISLSLNLNSDQHKQIVVKKEKTIKSSPNSNQIATTANKELLYIDEEHPSEATPGPSTSIRPSHSIYLPDSMVRSCSVGYLDLVDAQMVPSDVALLMLRKDAPKRLVLVNRKNKHKRIHRKQDRDKAIVQSPKLKNCGKSKSLDSSDIFPSCESNTIKVNVKKEIIPEVVVQNKNVSAPSNNNPRQTSSLEDNIVINNNNNNNTNNKKEKLGFFISKSPLLRRKKSEAESNVINDKSSKSRSRSKQKGSSSKSNTDASQNAGVNNSRPGLSLHTHALATLENLLTRLREDDDRKTPPQTPRLPRSSPASPAPSKKGKRPQSASPIRKNILSSPLLGRRNRKSRAQESSDDEVVASGDEVFNGTNYKDLETFQKAQLRQKLKRGKIEPNGSSCNNHQHVPQRREFVMHNKAPMWNENSQVYQLDFGGRVTQESAKNFQIEFRGKQFLLLYPPCKPNTYPCEVCGTIFTNKKRWRSHKKTHKPFFVETPLEYSFNKDKKVYECKTCKIECKNKVDMKNHLDEHREEISCPYCSKTFKGLHKCAIHTLEHNKDFYRCPLCEFKNSGRDNIIRHIDKTHLKKYNFVCKHCGKCFANGKFHAEHEENHLTDNVKFQCVVCKKIFKHSSYLLNHQTRNHRIIIEGVLSKFQCDICLKVLTTSKLLENHKKRHSSDRNRKEKKYLCDMCGKGFPQSDQLKIHYRVHTGEKPFSCFHCSKTFAKKSSLEMHERIHTGEKPYSCEYCGKSFNQPTSLKIHIRTHTGEKPYVCRLCGKGSATNGAMKLHMKSCRVID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01287230;
- 90% Identity
- iTF_01287230;
- 80% Identity
- iTF_01287230;