Basic Information

Insect: Quadriops clusia
Gene Symbol: -
Assembly: GCA_033557875.1
Location: JAWQRP010000553.1:10509-16052[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.24 20 6.8 0.5 3 21 8 27 6 28 0.85

2 14 2.4 2e+02 3.6 0.0 2 20 34 52 33 54 0.89

3 14 0.02 1.7 10.1 2.6 1 21 285 305 285 306 0.94

4 14 3.8e-05 0.0032 18.7 1.6 1 23 312 334 312 334 0.98

5 14 0.0008 0.066 14.6 2.5 1 23 355 377 355 377 0.97

6 14 1.4 1.2e+02 4.4 0.6 1 23 408 429 408 429 0.85

7 14 2.4e-05 0.002 19.3 1.3 1 23 435 457 435 457 0.98

8 14 0.29 24 6.5 2.6 1 20 463 482 463 484 0.94

9 14 5e-05 0.0041 18.4 1.7 1 23 493 515 493 515 0.98

10 14 1.8e-06 0.00015 22.9 2.6 1 23 521 543 521 543 0.98

11 14 0.0018 0.15 13.5 4.4 1 23 549 571 549 571 0.98

12 14 1.5e-05 0.0013 20.0 0.4 1 23 577 599 577 599 0.98

13 14 7.1e-05 0.0059 17.9 0.2 1 23 603 625 603 625 0.98

14 14 0.00069 0.057 14.8 0.1 1 23 633 655 633 656 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.24	20	6.8	0.5	3	21	8	27	6	28	0.85
2	14	2.4	2e+02	3.6	0.0	2	20	34	52	33	54	0.89
3	14	0.02	1.7	10.1	2.6	1	21	285	305	285	306	0.94
4	14	3.8e-05	0.0032	18.7	1.6	1	23	312	334	312	334	0.98
5	14	0.0008	0.066	14.6	2.5	1	23	355	377	355	377	0.97
6	14	1.4	1.2e+02	4.4	0.6	1	23	408	429	408	429	0.85
7	14	2.4e-05	0.002	19.3	1.3	1	23	435	457	435	457	0.98
8	14	0.29	24	6.5	2.6	1	20	463	482	463	484	0.94
9	14	5e-05	0.0041	18.4	1.7	1	23	493	515	493	515	0.98
10	14	1.8e-06	0.00015	22.9	2.6	1	23	521	543	521	543	0.98
11	14	0.0018	0.15	13.5	4.4	1	23	549	571	549	571	0.98
12	14	1.5e-05	0.0013	20.0	0.4	1	23	577	599	577	599	0.98
13	14	7.1e-05	0.0059	17.9	0.2	1	23	603	625	603	625	0.98
14	14	0.00069	0.057	14.8	0.1	1	23	633	655	633	656	0.95

Sequence Information

Coding Sequence: ATGAGTGGTTTCCAGCTGGAGTGCCCCTTGTGCTGCAGCGAGACGTTCACATCCACAGATTCACTAAAGTACCACTTGCTGAGCATCATCGATAATCTCGTGTGCCCTGCTTGCGACCAGAGGTTCGAGAAGATCTTGGATCTTGCTGAGCATTTAGGATCGAAATGCCCAAAAAACAACATTCCCCCCGAACGACCGTTAATAAAACTGGAAAAAATGGAGTTGGAAGACGTCGAAGATTCGATAAACACAACAGTTTTAGAAAAGAGCATCCTAGCGAAAGCGTTAATGCAGAAACCAGTCGACAACGACAAGGCTTCAATCTCCATCATCGAGACTGAAGAAGAAACTGGCGGGGAAACTGTCGAGTTAGTCTTTGCGAACGAGGACGAAGATGGAGAAGGCGAGAAGAAACCCGACGGAGAAGAAGTGTTTTACTGCTCCAGCTGCATGATGAGCTTCAATTCTGTCGATGCTCATCTTGAGGAATATCACGAAGGACAAACTGTATTTATTGAGGATGGCCCGGCCGGCGAAGAGCAAACCGAAGGCCAAGAAGAAACCAGCTTCTACGTAGTGCAAGGCAACGAGAACGAAGACAACTCGAACGAAAGCGCCGACATTCCCCAAACCGCCGAATACAACACCGTCCAAGAGGAAGATTGTGTGGACAAAGATGGTCGGCTCTACACCCGCAAAGTAGTGCAAATCGAGAAATTCTGGGACGAGACCAAAGAATCCTCCAAAGCGCCACCGATCACGCTGCAGTACGTTCTGGAGAACGGGAAAGCCAAACGGGCGGACGAATCCGATCTCGGCAATCTAGCCGAGAACCAGAAGCTCCTGGTGATCTACCAATGCCCGGGATGCGCCATTCATTTCTCCAAGCTGGAGCAGTACAACAAGCACAAGTGCTCGAAGGCAGCCAGCATGTACAAATGCACCAAGTGCAACTCGACGTTCAGCACGGCGAAATCGGTGAACGCCCACATGAAGCTGCACAAGCCGGACAAAACCCAGAGCAATCCTTCGACTCCGCAAGCTCACGACAACCACGGGCCCCACATTTGCGACACCTGCAACACGGAATTCCCTTCGTACAAATCGTTGCGATTGCACAGACGAATGCACGACCCCATCAAAGAGAAGGAAATTGAACCGCCCGTCACATATGGGATAATGGGCGAAGACATCTTGCCGAAGGAGGACAACCGCGAGATGTTCGTTTGTGAGGTCTGCAACAACACCTACGACAAGCAGTACGAAGAGGTGCACATGAAGTCGCACGTCGACGAGGAGAAATATGATTGTCGCATTTGCAATCGCAAGTTCTTCACGCAAACTAATTTGGAAATGCACGTTCGGGTGCACTCCAACGGGAAGAAATTCTGCTGCTCGCAGTGCAAGAAGAACTTTTTGACTTACGAGACTCTGCAGGAGCACATCACTAACCAATGCAACACGAACACTAAGCTATACGAGTGCCAGTATTGCGGACGGAGGTTCGTGAGGCCACACGAGAAGGTGAAGCACGAACGGATTCATACAGGAGAAAAGCCCCACGTGTGCGGTATTTGCGGGAAGGCCTTCCGAGTAAGCTACTGCCTCACGCTCCACATGAGGACGCATTCCGGAACGAGACCCTACCAATGCGCTACCTGCGGGAAGCGTTTTAAGGCACACAGCGTCTACAACCACCACCTGCTGACGCACTCTAGCGAGCGCAACTACAAGTGCCCTTATTGCCCCAAGTCATTCAAGACAGGAGTGCAACTGGCGGGGCACAAGAACAGCCACATCAAGCCGTTCACCTGCAAGGTTTGCAACCGGCCCTTCGCCTCGCTCTACGCTGTTAGGGCCCATATGGACTCGCATTATCGGGAGAACAATCTCAAGTACAATTGCGCGGAATGCGGGGCTTCTTATGCACGGGCTTTCGCTTTGAGAGACCACGTCAAGGCCCACCATCCCGGGATGGTCGACAAAGTCGACCCGCTGCTGCAAGAATACGAGATGGTTTCCGAGGGGATCGACGCTAGCGCTACGATTATTCCCGTCGATGAAAGTGTGTTGGTGCAGTACGAACAGACGACTGTCGAGGATGTCGAGTTGGTCGAAGAGGTCACCACCGATGTTTGCTGA
Protein Sequence: MSGFQLECPLCCSETFTSTDSLKYHLLSIIDNLVCPACDQRFEKILDLAEHLGSKCPKNNIPPERPLIKLEKMELEDVEDSINTTVLEKSILAKALMQKPVDNDKASISIIETEEETGGETVELVFANEDEDGEGEKKPDGEEVFYCSSCMMSFNSVDAHLEEYHEGQTVFIEDGPAGEEQTEGQEETSFYVVQGNENEDNSNESADIPQTAEYNTVQEEDCVDKDGRLYTRKVVQIEKFWDETKESSKAPPITLQYVLENGKAKRADESDLGNLAENQKLLVIYQCPGCAIHFSKLEQYNKHKCSKAASMYKCTKCNSTFSTAKSVNAHMKLHKPDKTQSNPSTPQAHDNHGPHICDTCNTEFPSYKSLRLHRRMHDPIKEKEIEPPVTYGIMGEDILPKEDNREMFVCEVCNNTYDKQYEEVHMKSHVDEEKYDCRICNRKFFTQTNLEMHVRVHSNGKKFCCSQCKKNFLTYETLQEHITNQCNTNTKLYECQYCGRRFVRPHEKVKHERIHTGEKPHVCGICGKAFRVSYCLTLHMRTHSGTRPYQCATCGKRFKAHSVYNHHLLTHSSERNYKCPYCPKSFKTGVQLAGHKNSHIKPFTCKVCNRPFASLYAVRAHMDSHYRENNLKYNCAECGASYARAFALRDHVKAHHPGMVDKVDPLLQEYEMVSEGIDASATIIPVDESVLVQYEQTTVEDVELVEEVTTDVC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -