Basic Information

Insect: Quadriops clusia
Gene Symbol: -
Assembly: GCA_033557875.1
Location: JAWQRP010015739.1:2744-4476[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 6.6 5.4e+02 2.2 0.2 1 18 63 80 63 80 0.92

2 13 0.07 5.8 8.4 1.9 2 23 143 164 142 164 0.96

3 13 0.013 1.1 10.8 5.0 1 23 174 196 174 196 0.98

4 13 3.7e-07 3e-05 25.1 4.3 1 23 203 225 203 225 0.97

5 13 5.3e-05 0.0044 18.3 1.5 1 23 236 258 236 258 0.97

6 13 1.9e-07 1.5e-05 26.0 0.3 2 23 265 286 264 286 0.97

7 13 1e-06 8.3e-05 23.7 2.2 1 23 292 314 292 314 0.99

8 13 5e-05 0.0041 18.4 1.1 1 23 320 342 320 342 0.98

9 13 0.021 1.7 10.1 0.4 8 23 370 385 369 385 0.97

10 13 0.00052 0.043 15.2 0.7 1 23 391 413 391 413 0.98

11 13 1.5e-05 0.0013 20.0 2.8 1 23 419 443 419 443 0.99

12 13 7.4e-06 0.00061 21.0 1.5 1 23 449 471 449 471 0.98

13 13 9.6e-07 7.9e-05 23.8 0.6 1 23 477 499 477 499 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	6.6	5.4e+02	2.2	0.2	1	18	63	80	63	80	0.92
2	13	0.07	5.8	8.4	1.9	2	23	143	164	142	164	0.96
3	13	0.013	1.1	10.8	5.0	1	23	174	196	174	196	0.98
4	13	3.7e-07	3e-05	25.1	4.3	1	23	203	225	203	225	0.97
5	13	5.3e-05	0.0044	18.3	1.5	1	23	236	258	236	258	0.97
6	13	1.9e-07	1.5e-05	26.0	0.3	2	23	265	286	264	286	0.97
7	13	1e-06	8.3e-05	23.7	2.2	1	23	292	314	292	314	0.99
8	13	5e-05	0.0041	18.4	1.1	1	23	320	342	320	342	0.98
9	13	0.021	1.7	10.1	0.4	8	23	370	385	369	385	0.97
10	13	0.00052	0.043	15.2	0.7	1	23	391	413	391	413	0.98
11	13	1.5e-05	0.0013	20.0	2.8	1	23	419	443	419	443	0.99
12	13	7.4e-06	0.00061	21.0	1.5	1	23	449	471	449	471	0.98
13	13	9.6e-07	7.9e-05	23.8	0.6	1	23	477	499	477	499	0.98

Sequence Information

Coding Sequence: ATGGATTCCACGCTGACTGCTAGTTGTGTGTTGTTGAGCTGTGTAAATCCAAATACCTTTGAACGGCTGTGCAGAACCTGTTTGTCTGTTAAGGAGGAGCTGAAACCGTTGTACAGCAATCGTTTGGTAGAAATGCTCGTTTCAGTCGCATCAATACAGGTGGACGTGAACGACGGGTTACCGTCGTACATATGCTCACAGTGTGTCGTTAACGTGACCCAGGCTTACAATTTCAAACGGCAAGCCGAGTCTTCGGATGCCGCCCTGAAACAGTATTTAGGTAATTTTACCGCTCAAGGTATGCTCGCGTCTCCGACGGAGACGGACATCGTCACACCCAAGTATGAATCCGCTTGTACAGAAAGTTTCGTGTCGAGCAACGATTCGTTCTCACAAACTTCTTCTGTCGAGGAATCAAAGATTCTGAACTGTGATATCTGCTCGTTCTTTTGCAAAGAACGGACCGCTCTAGATGAACACATGAAGAGTCACTTGGACTCTGTCATCGAACCCTCACCTTATAGCTGTGATACATGTTCATTTAGCTGTGACAGTTTGTCTGATTTCCAAAAGCACAAGAAAAGCCACGAAAAGACCGTCACTGAACACATTTGCAACGACTGTGGAAAAAGATTTGTCCACAAAGCAACGTTGAGGACCCACATGAGAAGCCATCTGAAGAATAACCACCTTAGAGAAAAGAAGCACGTTTGTCAAGAATGcggaaaaaagttttttgaatCCAAGGAATTATTGATACACACTCGGGTCCACACCGGGGAACGTCCGTTGACATGCGAGACCTGTGGGAAATCTTTCGCCGATCCCAGAAGTCTGAcgaaacatattaaaatacatactgGAGAAAAGAATTACGAATGCGACATTTGTCAGAAACGCTTCATTCATTCTTACACTCTGACGGCGCACAGGAGGGTCCACACGGGGGAAAAACCGTTCATCTGTTCGACTTGCGGCTACGCCTGCGCCACGTCGACCCAGCTAACGATTCACACCCGCATCCACACCCAGGAACGGCCCTACGGCTGCAAATTGTGCACAAAGGTACACGTCGCGCTCGAATCGCGTATCACGAGTGTTTTTGTCAAGACCTTTACTAGCCGCAGCGGACTCTCGACTCACCAAATGACGCACACGGGAGAACGCAGGTACATCTGCGCCGTCTGCGGCAAGGGGGCCAGGACCTCCACCGATCTGAACTGCCACATGAGGACCCACACCGGCGAGAAACCCTACGAGTGCAAGGTCGTCGACTGCACCAAGAGGTACAGGACGCACAGTCAACTCAGTGCTCACACGAGGACGCACACAGGAGAAAAGAGGCACAAGTGCACCGTCTGCGAGAAAGCATTCGCCGACTCGACCCAACTCAAGAGCCACACGAACATTCACACGGGCGTGAAGCCTTACGTGTGCTTCGTTTGCGGTCAACGATTTACTCAATCGGGTTCTTTATCGACCCACATGAAAATACATAGGTAA
Protein Sequence: MDSTLTASCVLLSCVNPNTFERLCRTCLSVKEELKPLYSNRLVEMLVSVASIQVDVNDGLPSYICSQCVVNVTQAYNFKRQAESSDAALKQYLGNFTAQGMLASPTETDIVTPKYESACTESFVSSNDSFSQTSSVEESKILNCDICSFFCKERTALDEHMKSHLDSVIEPSPYSCDTCSFSCDSLSDFQKHKKSHEKTVTEHICNDCGKRFVHKATLRTHMRSHLKNNHLREKKHVCQECGKKFFESKELLIHTRVHTGERPLTCETCGKSFADPRSLTKHIKIHTGEKNYECDICQKRFIHSYTLTAHRRVHTGEKPFICSTCGYACATSTQLTIHTRIHTQERPYGCKLCTKVHVALESRITSVFVKTFTSRSGLSTHQMTHTGERRYICAVCGKGARTSTDLNCHMRTHTGEKPYECKVVDCTKRYRTHSQLSAHTRTHTGEKRHKCTVCEKAFADSTQLKSHTNIHTGVKPYVCFVCGQRFTQSGSLSTHMKIHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -