Basic Information

Insect: Quadriops clusia
Gene Symbol: Rreb1
Assembly: GCA_033557875.1
Location: JAWQRP010000187.1:14491-20499[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.37 31 6.2 0.1 1 21 30 50 30 51 0.92

2 24 0.2 17 7.0 1.3 3 23 59 79 58 79 0.95

3 24 0.05 4.2 8.9 1.0 2 20 534 552 533 556 0.94

4 24 0.0099 0.82 11.1 1.2 1 23 559 581 559 581 0.95

5 24 0.00037 0.031 15.6 0.5 2 21 588 607 588 608 0.92

6 24 1.3e-06 0.00011 23.3 1.0 1 23 612 635 612 635 0.96

7 24 9.2e-05 0.0076 17.5 5.6 1 23 640 662 640 662 0.99

8 24 0.1 8.4 7.9 2.9 1 23 671 692 671 692 0.97

9 24 0.0071 0.58 11.6 0.3 1 23 699 721 699 721 0.96

10 24 1.7e-07 1.4e-05 26.1 0.5 1 23 727 749 727 749 0.99

11 24 2.9e-06 0.00024 22.2 1.7 1 23 755 777 755 777 0.99

12 24 0.0013 0.1 13.9 0.0 1 21 809 829 809 830 0.95

13 24 0.036 3 9.4 0.7 3 23 840 860 839 860 0.95

14 24 0.019 1.5 10.3 1.0 2 23 1197 1218 1196 1218 0.96

15 24 0.0016 0.13 13.6 0.6 1 23 1533 1555 1533 1555 0.97

16 24 2.9 2.4e+02 3.3 1.1 2 23 1559 1579 1558 1579 0.90

17 24 0.14 11 7.5 1.9 2 21 1586 1605 1585 1606 0.93

18 24 0.0049 0.4 12.1 2.9 1 23 1612 1635 1612 1635 0.97

19 24 8.4e-06 0.0007 20.8 6.0 1 23 1640 1662 1640 1662 0.98

20 24 0.24 20 6.8 1.0 1 23 1670 1691 1670 1691 0.94

21 24 0.00056 0.046 15.0 1.5 2 23 1699 1720 1698 1720 0.97

22 24 3.6e-06 0.0003 21.9 0.3 1 23 1726 1749 1726 1749 0.95

23 24 4.1e-05 0.0034 18.6 1.8 1 23 1755 1777 1755 1777 0.97

24 24 6.4e-05 0.0053 18.0 0.3 1 23 1783 1806 1783 1806 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.37	31	6.2	0.1	1	21	30	50	30	51	0.92
2	24	0.2	17	7.0	1.3	3	23	59	79	58	79	0.95
3	24	0.05	4.2	8.9	1.0	2	20	534	552	533	556	0.94
4	24	0.0099	0.82	11.1	1.2	1	23	559	581	559	581	0.95
5	24	0.00037	0.031	15.6	0.5	2	21	588	607	588	608	0.92
6	24	1.3e-06	0.00011	23.3	1.0	1	23	612	635	612	635	0.96
7	24	9.2e-05	0.0076	17.5	5.6	1	23	640	662	640	662	0.99
8	24	0.1	8.4	7.9	2.9	1	23	671	692	671	692	0.97
9	24	0.0071	0.58	11.6	0.3	1	23	699	721	699	721	0.96
10	24	1.7e-07	1.4e-05	26.1	0.5	1	23	727	749	727	749	0.99
11	24	2.9e-06	0.00024	22.2	1.7	1	23	755	777	755	777	0.99
12	24	0.0013	0.1	13.9	0.0	1	21	809	829	809	830	0.95
13	24	0.036	3	9.4	0.7	3	23	840	860	839	860	0.95
14	24	0.019	1.5	10.3	1.0	2	23	1197	1218	1196	1218	0.96
15	24	0.0016	0.13	13.6	0.6	1	23	1533	1555	1533	1555	0.97
16	24	2.9	2.4e+02	3.3	1.1	2	23	1559	1579	1558	1579	0.90
17	24	0.14	11	7.5	1.9	2	21	1586	1605	1585	1606	0.93
18	24	0.0049	0.4	12.1	2.9	1	23	1612	1635	1612	1635	0.97
19	24	8.4e-06	0.0007	20.8	6.0	1	23	1640	1662	1640	1662	0.98
20	24	0.24	20	6.8	1.0	1	23	1670	1691	1670	1691	0.94
21	24	0.00056	0.046	15.0	1.5	2	23	1699	1720	1698	1720	0.97
22	24	3.6e-06	0.0003	21.9	0.3	1	23	1726	1749	1726	1749	0.95
23	24	4.1e-05	0.0034	18.6	1.8	1	23	1755	1777	1755	1777	0.97
24	24	6.4e-05	0.0053	18.0	0.3	1	23	1783	1806	1783	1806	0.97

Sequence Information

Coding Sequence: ATGAAGACACCGTTGTTCAGACTTCTGTGTTTCCGTTGCAGATCCGAAGTCGTGCAGTTGGAATCAACTCTAGACATAGTAGGCGAGTACGAATGCGACATCTGCCACGCATCGTTTCTAGACATTCAAGAATACGAAATCCACATGAACAAGAATACGCAAGAGCCGCCGATCTGTTGCGAATGCGACGTTGAATGTGTCGATAGAGTTGATTTAACGAGACATTTCGAAGTGCACCGACTTCTGGATTCTTTGGATCTTGACGAAGAGGACTATTCGGTTAACTTGGAATACGAAGCAAATGCAGCAGAGGAAGGAGAAGGAAATGTTACTGGCATAATCCTGCCGAAGAATCAGGCCGTGGTTGTGCAACAAACTTCTTTGGAAACTCTTCAGGGAGATGGATCTTCTTTGAAGGAAACAACGCCCATTTTGACTACAGCCCCCATAACTTATTTAGTGATGGATGGCAAATTGGTGCCAGGAATTATAGCTTCGACGAAGGTCCCTAATCTCGTCGCTGGTCATCAACAAGTTCCTGTTTCTGAAGACATGGCGATTTCTCAAAGAGTTCCTATTTCTCAGCAACTACTGAATGCTCAGCAGTTGGCAAAATCCGAAGGACTCCCAATGTGTCAAAAGCTTTCAATTTTGCAAGAAAATCCaattttgcaagaaaatacaattttgCAAGAGAATCCAATTTCTCAAGAAGTTCTAAATTCTCAAGAAGTTCCAATTTCTCAAGAAGTTCTCATTTCTCAAGAGGTTCTAATTTCTCAAAAAGTTGCCATTTCTCAAGAAGTTCCAATTTCTCAAGAAGTTCCAATTTCTCAAGAAGTTCCAATTTCTCAAAAAGTTGCTATTTCTCAAGAAGTTCCAATTTCTCAAGAAGTTCCAATTTCTGAAAAAGTTGCAATTTCTCAAGAGGTTCTAATTTCTCAAGAATTTCCTATTTCTcaagaacttttattttctgaagAACTTCCAATTTCTCAGGAACTCCCGATTTCCCAACAACTCCCGATTTCCCAACAACTTGCAATTTTGCAGCAACTTCCAACTACTCAACCATTACACCAAGTAGAAACTCAACAACTGAAAAACTGCTCAGAAATTGAGTTTCTTGGGGAAAACGGGATTCCTCAGCAAATGGAAGAAATTCAATTCCTTCAGGATTTACCACTATTTCATATAGTTTCAGCAAGTCAATCAATCATTCCTTCAAGTAACTCGATGAATCTATTAAGTAAATCAATAAATCCAATCAGTAAATCAAATGAACTATCAAGTAAATCGAAGAAATCAACGAGTAAACCAATAAATCAATCAAGCAAATCACCatcaaataaatcaatgaagCCATCTAGTAACTTAATAAAAGCAAGAAATAAACCAATGAATCCATCAAGTATACCAATGAATCCATCAAGTAAACCAAAGGATTCATCAAGTAAACCAAAGGATCCATCAAGTAAACCAAAGGATCCATCAAGTAAACCAAAGGATCCATCAAGTAAACCAAAGGATCCATCAAGTAAACCAAAGGATCCATCAAGTAAACCAATGAATCAACCTACCAAAAGGCAGCAAGACTGGATTTGCGAGTTCTGCCAATGTTCCTTCGAAACCAAACCAAACCTGGTAAACCACCAATGGCAACTTCACGGACCATTCAACTGTCCCCATTGCAACAAGCAAATCAACAACGAGCCAGCATTCAAGAAGCACATGGACGACCACAAAATGGCCTCTTACGCAGTCTGTGACTTGTGCAGCAAGTCCTTTCGCCATGAGGCTAACTTAGAAAGGCACAAAATTACTTGTCGTGGCTTCACTTGCAAAGAATGCGGGAAGATCTTCACCACGAGGCAGTACCTCAACAAGCACATAAATGCCGAACACATTGGGTTGCGGTATTCCTGCAAATGGTGCGATAAGATTTTCAAGCATAAGCAGTACTACAAGAGTCACATCAAGACGCATTCTCCAGGATACGTCTGCGATTTGTTCACATGTCCAATGTGCAACAAGCGAGTGAACTCTAAGTTTAAGAATCAACACATGAAGACGCACGATGAGCAGAGGAAAACATACGTTTGTCAGGAATGTGGCAAAGTTTTGACTAGCAAAGTGGGCTTGAATTGCCATCTGGAGATCCATCGAGGAACCAAATCGTTCCAGTGCGACATCTGTGGGAAAGCATTCAGACAGAACAAAAACTTGGTCGTGCACAGGATGACGCATACGAACGAACGAAAGTACCAGTGTGATATATGCTCGAAGAAATTTACTCAGAGGACCTCTTTGGTTGTGCATTTGAGGAAACATTCGGGGGACAGGCCTTATGAATGCGACGTTTGCAGTAAATCATCCAAATTTGAGAAGCCGGATCCTCCCGAACAAACGTTGGGCGGCCTTCTATACATTTGCGATATCTGCAGCAAAACCTTTGCAGATGAACAAGAATATGCTGCGCACATGAGTAAAAACTCTGCTGACCAGTTGTTCAAAATCTGTTGCGTATGCAAGGGCCCCTTTAACACCAGGGCCAACTTGATAAGGCATTTTGAGGTGCACGAGAAACGGAAGCTCGCTAGGTTAAACCGGACTTCGAGAAAAGGCGAAACTTCGAGAAAAGGCAAAACTTCGAGAAAAGGCAAAACTTCGAGAAAAGGCAAAACTTCGAATCAATCAAAGAGAGGTGCCGAGGATCATAGtgaaattgaaagtaaaaacGATACTAGCAGTAAAATCCACGTAGTAAATGATAATGGTGCTGAATTATTAGCATCTACTAAGGAAGAACCTGTGGATTATCTGATGACTTCTGATGGAACTTTGATACCGTATATCTTTGTGGGGAACAGTGGAGTTTGTTTGCAGAAAACTGAGTCGGAGTTGGAGAAAGCCGATAGTTTTGTTGCTTCAATGGATACGGctaattctttaaaaagttctgaagatttaaaattttctgagCTTTTGAGTTCTAATCAACTTTTAAGTTCTAAGGTTTTGAAGTCGGATGCTCTTTTGAATTCAACTGGAGAGTTTGACTCGATTGAAGATTTTAATTCGAGTCAAATGTTTAGTTCAACTCAAGCATTTAATTCAACGCAAGTATTTAATTCAACTCAAGTATTTAATTCAACTCAAGTATTTAATTCTGCTCAGAAACTAAATTCAAATCAGTCTCCAAATTTAGCTCAATCGTCAAGTTCTATTGAATTTCTGAGTTCTAGTGaacttttaaatgaaaatgagcTGTTAAATTCAAAGGaacttttaaattcaaatgaacTGTTGAACTCAAACGaacttttaaattcaaatgaaattttacctTCAACAGAGCTTTTAAATTCTAATGACTTAAATGCTACGGAACTATTGAATTCATCTGACATTTTAGACTCTACTTTAAATTCCACAGACTTTCTGAATTCTACTGATGTAAATTCTGTCGATTCAAGTTCTGTTCATGTACAGTTTATCGATGTTAATTCCGCTgatgttaattctattaatgtaaattccaTAAAACCAGTTACCCCGTTAATCTCTGAAAAATCTACCAAATGCTGGCCATGTGAATTGTGTCCTAAAACGTTATTCAGGAAATCAAGGTATTTAACACACCGAAGAAGccatatatataaaacttgtCCTTATTGCCACGAAAAGTTATTGTTAAGTCGCTTCAACAGACACTTGACTGCCCATACTGAATTCCTAAGGTCTTCAGGACTTCTAAAAGCTGACGATCTTCTAACTTCGACTGAAGGTTTAGATTCTGCTGATGTAGATCCTGCTGAAGCTTCTATAATTCCCTTTGAAGATCCGTCCCCAGATGAGTTAAATTCTACCCAAGATTTAAATCAGTCTCAAGTTTTAAGTTCTACTAAAGATTTAAGTTCTAATAAAGTTTCAAGTTCTACTAAAGTTTTTAGTTCGAAAGATGCCTCAAGTACAAAAAACATCTTCAGTGCTACAGACTTGTTAATTTCAACATATCCTCCAACTTCTACGCAAGTTTTAAACTCTAacttacaaattatttcattacaaacaataaaatccccaataatattaaaatctacAACAGTATTAAatcctaatttaatttcaaacccGAACTTAGTTTCAAAACCAAACTTAGTTTCAAAACCAAACTTAGTTTCAAAACCAAACTTAGTTTCAAAACCAAACTTAGTTTCAAAACCAAACTTAGTTTCAAAACCAAACTTAGTTTTAAAACCAAACTTAGTTTTAAAACCAAACTTAGttttaaaaccaaatttagttttaaaaccaATCTTAGTTTCAAAACCAAACTTAGATTCAAAACCAAACTTAGTTTCAAAACCAAACTTAGTTTTAAAACCAACCTTAGTTTTAAAACCAAACTTAGTTTCAAAACCAAACTTAGTTTCAAACCCAAACTTAGTTTCAACACCAAACTTAGTTTTAAAACCAAACTTAGTTTTAAAACCAAACTTACTTTCAAAACCAAACTTACTTCCAAACCCAGAATTTGTTTCAAACCCAAACCTGTCAAATGCCAACCCCCAATCTTCAAACTCTAAAAAAGGCTTCGCTTGTGAGATTTGCTCAAAGACTTTCTCCGAAAATGCACGATATCTAGTGCACAGAAACACTCACATCTTAAAACCCTGTCCTCATTGCGACAAATTGATATTCAAAAGCCGGTTTGAACGCCACTTAGCGGTTCACACGAAATCAAATTACTTGAAATGCGAACTCTGCGAGAAATCTTTCTTCAAGAAGAAAGTGTTtgagaaacataaaaaacttTGTAGTAATGGTGGATACGCTTGTCAGACTTGCAACAAGCAATTTAAAACTTCGAGCAGTTGCACTGCCCATGTCCAAACGATTCATAAGCGAGAAACACACCGTTGCGACCATTGCGGCAAATCGTTTGCCTCTCGCCAGTACCTGAAAAACCATCTTAAGACTCATCAACCGGGGTACGTAAAAGAATTCTCGTGTCCCGTTTGCAAGAAAGTTATAAGCtcgaattttaaaagagtgCATATGAGAAGACATGAACTGGGAAAACGTTCGGTCGTTTGCCACGTATGTGGCAAACAGTTATGCAGTTTGCAAAGCTTAAATGCGCACATGTTAATGCACGAGGGTGTGAAACCATTTGAATGCAACGAATGTGGAAAATCGTTCAGGTTGAAGAAGAACTTGAGCATCCACATCAACGGTGTGCACAAGAAAGAAAGGTTACACAGTTGTGAAGTCTGTGGGAAGAAATTCAGTCAGGGGACTTCCTTAAAGCTGCATATTCGCCAACATGCCAACGAAAGACCTTTTAGTTGCAATGTTTGCTCTAAGAAGTTTGTTGCGAACGGTAGCTTGACCGTTCATATGAGGAATGTCCATCAAATAATACACAATTAG
Protein Sequence: MKTPLFRLLCFRCRSEVVQLESTLDIVGEYECDICHASFLDIQEYEIHMNKNTQEPPICCECDVECVDRVDLTRHFEVHRLLDSLDLDEEDYSVNLEYEANAAEEGEGNVTGIILPKNQAVVVQQTSLETLQGDGSSLKETTPILTTAPITYLVMDGKLVPGIIASTKVPNLVAGHQQVPVSEDMAISQRVPISQQLLNAQQLAKSEGLPMCQKLSILQENPILQENTILQENPISQEVLNSQEVPISQEVLISQEVLISQKVAISQEVPISQEVPISQEVPISQKVAISQEVPISQEVPISEKVAISQEVLISQEFPISQELLFSEELPISQELPISQQLPISQQLAILQQLPTTQPLHQVETQQLKNCSEIEFLGENGIPQQMEEIQFLQDLPLFHIVSASQSIIPSSNSMNLLSKSINPISKSNELSSKSKKSTSKPINQSSKSPSNKSMKPSSNLIKARNKPMNPSSIPMNPSSKPKDSSSKPKDPSSKPKDPSSKPKDPSSKPKDPSSKPKDPSSKPMNQPTKRQQDWICEFCQCSFETKPNLVNHQWQLHGPFNCPHCNKQINNEPAFKKHMDDHKMASYAVCDLCSKSFRHEANLERHKITCRGFTCKECGKIFTTRQYLNKHINAEHIGLRYSCKWCDKIFKHKQYYKSHIKTHSPGYVCDLFTCPMCNKRVNSKFKNQHMKTHDEQRKTYVCQECGKVLTSKVGLNCHLEIHRGTKSFQCDICGKAFRQNKNLVVHRMTHTNERKYQCDICSKKFTQRTSLVVHLRKHSGDRPYECDVCSKSSKFEKPDPPEQTLGGLLYICDICSKTFADEQEYAAHMSKNSADQLFKICCVCKGPFNTRANLIRHFEVHEKRKLARLNRTSRKGETSRKGKTSRKGKTSRKGKTSNQSKRGAEDHSEIESKNDTSSKIHVVNDNGAELLASTKEEPVDYLMTSDGTLIPYIFVGNSGVCLQKTESELEKADSFVASMDTANSLKSSEDLKFSELLSSNQLLSSKVLKSDALLNSTGEFDSIEDFNSSQMFSSTQAFNSTQVFNSTQVFNSTQVFNSAQKLNSNQSPNLAQSSSSIEFLSSSELLNENELLNSKELLNSNELLNSNELLNSNEILPSTELLNSNDLNATELLNSSDILDSTLNSTDFLNSTDVNSVDSSSVHVQFIDVNSADVNSINVNSIKPVTPLISEKSTKCWPCELCPKTLFRKSRYLTHRRSHIYKTCPYCHEKLLLSRFNRHLTAHTEFLRSSGLLKADDLLTSTEGLDSADVDPAEASIIPFEDPSPDELNSTQDLNQSQVLSSTKDLSSNKVSSSTKVFSSKDASSTKNIFSATDLLISTYPPTSTQVLNSNLQIISLQTIKSPIILKSTTVLNPNLISNPNLVSKPNLVSKPNLVSKPNLVSKPNLVSKPNLVSKPNLVLKPNLVLKPNLVLKPNLVLKPILVSKPNLDSKPNLVSKPNLVLKPTLVLKPNLVSKPNLVSNPNLVSTPNLVLKPNLVLKPNLLSKPNLLPNPEFVSNPNLSNANPQSSNSKKGFACEICSKTFSENARYLVHRNTHILKPCPHCDKLIFKSRFERHLAVHTKSNYLKCELCEKSFFKKKVFEKHKKLCSNGGYACQTCNKQFKTSSSCTAHVQTIHKRETHRCDHCGKSFASRQYLKNHLKTHQPGYVKEFSCPVCKKVISSNFKRVHMRRHELGKRSVVCHVCGKQLCSLQSLNAHMLMHEGVKPFECNECGKSFRLKKNLSIHINGVHKKERLHSCEVCGKKFSQGTSLKLHIRQHANERPFSCNVCSKKFVANGSLTVHMRNVHQIIHN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -