Qclu004902.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Quadriops clusia
Gene Symbol
-
Assembly
GCA_033557875.1
Location
JAWQRP010001085.1:1-9803[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 2 1.6e+02 3.9 3.4 1 23 390 412 390 412 0.97
2 21 0.0006 0.05 14.9 1.3 1 23 417 439 417 439 0.96
3 21 6.2e-06 0.00051 21.2 0.6 1 23 444 466 444 466 0.98
4 21 0.0071 0.59 11.6 0.4 1 23 472 495 472 495 0.95
5 21 0.02 1.7 10.1 0.6 1 23 500 522 500 522 0.98
6 21 0.0012 0.097 14.0 6.5 1 23 530 552 530 552 0.98
7 21 0.014 1.2 10.6 0.4 2 23 558 579 557 579 0.96
8 21 2.6e-05 0.0022 19.2 1.3 1 23 585 607 585 608 0.96
9 21 8e-05 0.0066 17.7 2.0 1 23 613 635 613 635 0.97
10 21 0.0018 0.15 13.4 1.2 1 23 642 665 642 665 0.97
11 21 0.00075 0.062 14.7 0.0 2 23 697 719 696 719 0.95
12 21 0.0007 0.058 14.7 4.0 1 23 1553 1575 1553 1575 0.99
13 21 4.4e-05 0.0037 18.5 5.3 1 23 1581 1603 1581 1603 0.97
14 21 2.7e-05 0.0022 19.2 6.8 1 23 1608 1630 1608 1630 0.99
15 21 0.00018 0.015 16.6 0.6 3 23 1638 1659 1637 1659 0.96
16 21 0.021 1.7 10.1 0.2 1 23 1664 1686 1664 1686 0.96
17 21 0.00046 0.038 15.3 0.4 1 23 1695 1717 1695 1717 0.97
18 21 0.00069 0.057 14.8 0.4 1 23 1723 1745 1723 1745 0.98
19 21 4.9e-06 0.0004 21.5 0.4 1 23 1751 1773 1751 1773 0.98
20 21 2.9e-07 2.4e-05 25.4 0.9 1 23 1779 1801 1779 1801 0.99
21 21 0.0016 0.13 13.6 3.8 5 23 1810 1828 1807 1828 0.95

Sequence Information

Coding Sequence
TGTTCACCAATCACCTCTCCTCCTATCTTCAGCCTACCAGACCTCGAGGACGCCATATTGCCGAGAAAATGCACTAAGTACGTGCTGCTTTCTCAAGAAAACGAGGAATTTACGTCGAAACTGTTGACTAGAAGTTCAAAGTCGCCATCTTCGGATAAAACCATAACGTCTCTAGCTAAAACGACTCCAGCTAAAGCCATAACATCTTCAGCTAAAGCCATAGCATCTTCAGCTAAAGCGGTAACATCTTCACCTAAAGTCGTAACACCTTCAGCTAAAGCCATAACACCTTCAGCTAAAGCCATAACATCTCCATCTCCAGCTAAAGCCCAAAAGTTACCAATTCCCGTCATTACAAAGTTACGAGTTACGAAAGTCATCCCTTCTTCATCATTATCAGAGGACAAGTCTCCGAGGATTGTCAGAATGAACCAGAACAAGTTGAGGTTGGTCAATAATGAAGGCAATACTGCCAACTCTAGCTCGAAGTCGAATCAGATCTTTTTTGTTAAATCTTCTTTGAAGAATCAGCAGCTTAACCAGCAGTTCTCACAGAACCAGCAGTTCTCGAAAAATCAGTATAAATTATCGAATAGTCAGTACGAAACGAACCAAAGTTTCATCGTAAGAAAAGAAATCGTGGTAAAACGAGGGAACGATCTTGAAACAAAACTGGGGAAGGAAAACGAAGGGTTTAGGAAAGTGATCCACCTGAACGATAGAAACAGGGCTATTATGGAGAAGAACAAAGCGATTATTGAGAAATATAAGGCAGACATTAGGAACATTGAGGAGAAAATTGCAAAGCAATCGAGGTTAGACGCTGCAAACATTGGAGAAACTCAAAGCCAGAGGAATATTCAAAATGCAGTTGGTACCACAAGTGTTTCCAGCGCAAATGTTGGTACAACAAGTTTTGGTACCGCAAGTGTTAGTACCACAAATTTTGGAACAACAAGTGTTTGCACACTTCCTAACACTGAAACCACCCACGAAGGACAAATAGATTTTGAAAAAGAGATCGACTTAGGCCAACAAATGAGAAATAAGCAAGAAGATGTAAAAGCAAAGTTTGTACCACTACTACACAGACATAAATGTATAGACCTAACAGAAGATGGGGTAGAAAATAAGGTACACGTCGTGGTACCAAAGCCTAAAAGAGAATACAAATGCTCGAGATGCAAGAAGATACTGATGACCTTCAGAGGATACAAGAACCACAAATTGTCCCACGAGGTCCAGAAGTACCCATGCTGCTTCTGCGGGAAAATCTTCAAAACTCTGGCGAACGTACAAAAGCACGAAAACGCTCACAGGGGAATTCGGTTTCCTTGCACAGAGTGTGGAAAAGAACTGGCGACGAAACATCAATTGGCGGTCCATATGCGAAGACATGTCGGGAATTTTGCTTTTACTTGTGAAGAATGTGGGAAGGGTTACTATAATATTAAGGCGTTTAGGTACCACGTTGAATCTGAACATAAGGGAATTAGATACCAGTGCCTATATTGCCCATCAGTGTTAAGAAGCAAGAGGTATTGGAGAGACCATATGGCCAAGCACGAGAACAAGGATTTGAAGCAGCACCAGTGCAAAATTTGCCATAAATTGTATAGTAGCCATGGATCCCTGAATTCTCATATGAAGATCCATACGGGGGAACGTCTTGAATGTGAAATTTGTGGTAAAAAGTCCACTCAAAGAGCGGCGCACATTGTGCACATGCGGCTGCATACAGGGGATAAAAAGTTCGTTTGCGACTTTTGCGGGAAGGGATTCATCCGGAAAGACATGATGCTGATTCACATAAGGAAACACCACAGGTCTACCCAATTTCCTTGTGAGGTTTGCTCTGAAAGCTTTACCACCAAATACAAGCTTCAGATTCATCTGCATTCGCACGAAGAAGTGGACAAACCCTTCCAGTGTCCACATTGTCCGGAAAAGTTTATCGATGACAACTTTCTCCGGATTCATGTGAATAAGTTTCACATTGAAAACCGGGAGGATCCGGTGAGCGCCGGTAGGAAGAAACCTGCTCAAAAGGTGAAACGAGTTAGAGTGACTCGACCTGCGAAGAAAGTTTCTTGTGACGTTTGTGACGAAACTTTTGCTGGAGCTGCTGCTTTAACGGCGCACATGAAGGCTGAGCATGAAGGGGATGATGAGAATGATGAGAATTATAAGAACGATGAGAATTATAAgaatgatgaagatgatgaagaTAATGAGGATGATGAGGATAATCAGGATGATGAGGATAATCAGGATGAAGAGCAAATGAGTAGCGATGGTTCTGAGGAAAAGGAGGAGAGTGATTACGAAGATAATTCTGAGGATTCAGATATCCAAACCATTAAGAGTGCGCTTTTTCTTTTCAGCGATTTGTACGAAGAGAACATTTACAACACAAATTACAACATGCTAACAAACACCCCCAACTCTGACTTACAGTCGAAATACCTGCTAATGCTAATCGACTCTAATAACAAAACCGACTTAACCGACTCCGGCTTGCTGGGCAATTCTGTAGAGCAGCTCAACGATCCGGACGCAGAGCTGTTGAAGCTGTTGGCGGCAGAAGAGGAATGTTCTGCTTATTTCCAGAATATCGCCACCAATGAGCAATTTGAGGATCTCATGAGGAACGAAAGGGATTTGATCGGAAACCATGGGAGTCATCCGATGGCGAGCCATTCAGTTTCCCAACGGAATTTGATTGCTATCCAGAGGGATGTAATCGGTGGTCAAAGGTATCTGATGTGTAATCAGAGGTACTTGATGTCTGGGCAGATGGGGAACCAACGGAATTTAGTGGGTGGCCAAGGGGATTTGATTTCTGGTCGAGGAGATTTAATGCCTGGGCAAGAAGATTTAATATCTAATCCACAGGATTTAATATCTAATCCACAGAATATAATATCTAATCCACAGGATTTAATATCTAATCCACagaatttaatatctaatcCACAGGATTTAATATCTAATCCACAGGATTTAATATCTAATCCACAGGATTTAATATCTAATGCACAGGATTTAATATCTAATCCACAGGATTTAATATCTAATCCACAGAATATAATATCTAATCCacagaatataatatcaaatcCACAGAATTTAATAACCAGTCAGCAGAATTTAATGACGAATGAACAGAATTTGATGACAAATGAACAGGATTTGATAACAAATCAACAGGATTTGATAACAAATCAACAGGATTTGATAACAAATCAACAGGatttaatatcaaatcaaCGGAATTTGTTGGTTAACCAACCAGATTTGATAACCAATCAGCAAGGTTTAATCACTGATCATAGAGATTTAATTGCTAATCACAGaagtttaattcaaaatagCGACAACAGTGAGTTGATCCCAGGTAATAGTGATTTTATAAATGGCACTGAAGACTTTCTGGCGGATAGTCAAGATTCTACCAATCTGATTATTGATGAAAGTAATGTGATTATGAATGAAAGCGATGTTAGCTGCCTTGCCAATTCAGGAAATCAAAATTTACTCATTACAGGCGAtcggaattttatttcaaatcagGAACATGTTATCGTCGATTCTATTAGGGACTTCAATCACCAGAGTGTCATTGACGAACTTATTCAAAGCGAGAGCTTGAGGAACGAAAACTTGAGAAACGAAAGTTTGCAGAATGATGGTGGTAGTTTACGAAACGAAAACGAAAGGTTCCAACAAGACGAAAGTTTCCAACAAAATGAAAGCTTccaaccaaataaaaatttccaacCAGACGAAAATTACCAACAAAGTGAAATTTTCCCAGGAAGTGATGGTTTCCAACAGAATAAACGTTTCCAACAGAATAAACGTTTCCAACAGAATAAACGTTTCCAACAGAATAAACGATTTCAACGAAATGAAAGTTTCCAACAAACTGAAAGTTTCCAACAAAATGAAAGTTTCCAACAAAATGAAAGTTtccaacaaaatgaaaatttccaaCAAAATGAAAGTTTCCAGCAAGATGATAGTTTTAAACAAGATGATAGTTTTCAACAAGATGAAAGTTTTcaacaaaaggaaaatttcCAGCAAAATGAGAATTTCAGACAAAACGATCACTTCCTTCAAAATGAGAgttttcaagaaaacaaaacattgcatcacaaaaatgaacattttaaacACATAACACCACTAGGACCTTTAGTGCACGAACCTAATATCAACCCTGATATTGATCCTGATTCCAACCCTAATCTTGAGCCTGATTCTCATCGTGATCCTGATTCAGACCCTAATCGTAATCATCATGATCCTGATTCAGACCCTAATCGTAATCATCATCTTGATAACGACCTTGATCATGATCCTAACCTTGATCTTAATCTTGATCCCGATCCTGATCCTGATCTTAATTCTGCTCATAATCCAAATCATAATCCAGATCATAATCCAGATCATGATTCAGATCATGTTCAAAATTGTGATCCAAATCATGATCCAAATCGTGATCCAAATCGTGATCCAAATCATGATCCAGATCACGATCCAGGTTATGATCCTGATCAAGATCCTGATCTTGATCATGCAAATGATCCAGATGACCCAAAACCCCAAAAGCGCCAAAAACAACTCCAAACGAGCAAACCAAAAGAAGGATTCAAGTGCGACCAATGCGAAAAAACCTGCCCAACAAAGAAACTCCTCAAATACCACGTAATGACCCATTTGGGCATTCGTCCTCATTCCTGCGAGATCTGCAAGAAGTCCTTCAAACATCGTTACGAAGTAACAGTCCACATGAGGAGCCATAGCAAGCCAACCTTCCAATGCGACATTTGCTCGAAAATGTTCGTCCACAAGTCCCATTTGACTAGTCACAGGAAGAAGCATTTGAACGACTTCGTCGCCTTCTGCAACGAATGCAACAAAGGCTTCGTTTCCCAGTCTTCGTATACAAATCATGTGAATGTCCAACATGAGAATATGACCCACATTTGTGACGTCTGCGGGATACAAGTCAAGTCAATTTCCGCTTTGAACGAACACAAATTAACTCACGATTCTTCTTATGGAAGCCGCTCGCATATTTGCGATGTTTGCGGAAATGGTTACTTCAGCGCGAGAAACTTGAGGGCCCATATGAAAATCCATACTCAAATGAACAAATACATGTGCAGCATTTGCGGCAAACGCTTGAGCGGCAAAAAGGTCCTGGAGACCCATCTGAAGATGCATTCCGGagaaaagaatttcatttgcGAGTATTGCAACAAGGGTTTCGCCTCCAGCGAGTATTTGAACACTCACCTGAGGATACATAGCGGGGAAAAGCCATTTAGGTGCGGGATTTGCAACAAAGGATTCACGCAAAAGACTTCACTCACGGTGCACATGCGAGTGCACACTGGCGAAAGACCATACAAGTGCCAATGCGGGAAAGGGTTCACCACGAAGACGCACCTTCTGAACCACTATAAGACGCACGAGATGGCCAACTTGGACTTTGGTTACATTCCGCAGGATCTGTGA
Protein Sequence
CSPITSPPIFSLPDLEDAILPRKCTKYVLLSQENEEFTSKLLTRSSKSPSSDKTITSLAKTTPAKAITSSAKAIASSAKAVTSSPKVVTPSAKAITPSAKAITSPSPAKAQKLPIPVITKLRVTKVIPSSSLSEDKSPRIVRMNQNKLRLVNNEGNTANSSSKSNQIFFVKSSLKNQQLNQQFSQNQQFSKNQYKLSNSQYETNQSFIVRKEIVVKRGNDLETKLGKENEGFRKVIHLNDRNRAIMEKNKAIIEKYKADIRNIEEKIAKQSRLDAANIGETQSQRNIQNAVGTTSVSSANVGTTSFGTASVSTTNFGTTSVCTLPNTETTHEGQIDFEKEIDLGQQMRNKQEDVKAKFVPLLHRHKCIDLTEDGVENKVHVVVPKPKREYKCSRCKKILMTFRGYKNHKLSHEVQKYPCCFCGKIFKTLANVQKHENAHRGIRFPCTECGKELATKHQLAVHMRRHVGNFAFTCEECGKGYYNIKAFRYHVESEHKGIRYQCLYCPSVLRSKRYWRDHMAKHENKDLKQHQCKICHKLYSSHGSLNSHMKIHTGERLECEICGKKSTQRAAHIVHMRLHTGDKKFVCDFCGKGFIRKDMMLIHIRKHHRSTQFPCEVCSESFTTKYKLQIHLHSHEEVDKPFQCPHCPEKFIDDNFLRIHVNKFHIENREDPVSAGRKKPAQKVKRVRVTRPAKKVSCDVCDETFAGAAALTAHMKAEHEGDDENDENYKNDENYKNDEDDEDNEDDEDNQDDEDNQDEEQMSSDGSEEKEESDYEDNSEDSDIQTIKSALFLFSDLYEENIYNTNYNMLTNTPNSDLQSKYLLMLIDSNNKTDLTDSGLLGNSVEQLNDPDAELLKLLAAEEECSAYFQNIATNEQFEDLMRNERDLIGNHGSHPMASHSVSQRNLIAIQRDVIGGQRYLMCNQRYLMSGQMGNQRNLVGGQGDLISGRGDLMPGQEDLISNPQDLISNPQNIISNPQDLISNPQNLISNPQDLISNPQDLISNPQDLISNAQDLISNPQDLISNPQNIISNPQNIISNPQNLITSQQNLMTNEQNLMTNEQDLITNQQDLITNQQDLITNQQDLISNQRNLLVNQPDLITNQQGLITDHRDLIANHRSLIQNSDNSELIPGNSDFINGTEDFLADSQDSTNLIIDESNVIMNESDVSCLANSGNQNLLITGDRNFISNQEHVIVDSIRDFNHQSVIDELIQSESLRNENLRNESLQNDGGSLRNENERFQQDESFQQNESFQPNKNFQPDENYQQSEIFPGSDGFQQNKRFQQNKRFQQNKRFQQNKRFQRNESFQQTESFQQNESFQQNESFQQNENFQQNESFQQDDSFKQDDSFQQDESFQQKENFQQNENFRQNDHFLQNESFQENKTLHHKNEHFKHITPLGPLVHEPNINPDIDPDSNPNLEPDSHRDPDSDPNRNHHDPDSDPNRNHHLDNDLDHDPNLDLNLDPDPDPDLNSAHNPNHNPDHNPDHDSDHVQNCDPNHDPNRDPNRDPNHDPDHDPGYDPDQDPDLDHANDPDDPKPQKRQKQLQTSKPKEGFKCDQCEKTCPTKKLLKYHVMTHLGIRPHSCEICKKSFKHRYEVTVHMRSHSKPTFQCDICSKMFVHKSHLTSHRKKHLNDFVAFCNECNKGFVSQSSYTNHVNVQHENMTHICDVCGIQVKSISALNEHKLTHDSSYGSRSHICDVCGNGYFSARNLRAHMKIHTQMNKYMCSICGKRLSGKKVLETHLKMHSGEKNFICEYCNKGFASSEYLNTHLRIHSGEKPFRCGICNKGFTQKTSLTVHMRVHTGERPYKCQCGKGFTTKTHLLNHYKTHEMANLDFGYIPQDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-