Basic Information

Insect: Quadriops clusia
Gene Symbol: ZNF236
Assembly: GCA_033557875.1
Location: JAWQRP010017437.1:846-3776[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.0027 0.22 12.9 6.5 1 23 125 147 125 147 0.98

2 19 0.0042 0.34 12.3 0.3 1 23 153 175 153 175 0.99

3 19 1.8e-05 0.0015 19.7 1.2 2 23 181 202 181 202 0.97

4 19 0.021 1.7 10.1 0.1 1 23 208 230 208 230 0.95

5 19 0.0029 0.24 12.8 3.3 2 23 244 265 244 265 0.94

6 19 3.4e-05 0.0028 18.9 3.2 1 23 288 310 288 310 0.98

7 19 4e-06 0.00033 21.8 1.1 1 23 316 338 316 338 0.98

8 19 0.002 0.17 13.3 0.5 1 23 344 367 344 367 0.93

9 19 0.0082 0.68 11.4 1.7 1 23 377 400 377 400 0.97

10 19 3.7e-06 0.00031 21.9 1.8 1 23 479 501 479 501 0.98

11 19 4.1e-07 3.4e-05 24.9 1.0 1 23 507 529 507 529 0.99

12 19 0.00025 0.021 16.1 2.5 1 23 540 562 540 562 0.97

13 19 6.4e-08 5.3e-06 27.5 0.8 3 23 671 691 670 691 0.98

14 19 7.1e-06 0.00058 21.0 0.6 1 23 697 719 697 719 0.99

15 19 0.00012 0.0098 17.2 0.3 1 23 727 749 727 749 0.97

16 19 0.00019 0.016 16.5 0.8 1 23 755 777 755 777 0.97

17 19 4.1e-06 0.00034 21.8 3.2 2 23 881 902 881 902 0.98

18 19 6.4e-05 0.0053 18.0 1.5 1 23 908 930 908 930 0.98

19 19 1.7e-05 0.0014 19.8 1.1 1 23 936 959 936 959 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.0027	0.22	12.9	6.5	1	23	125	147	125	147	0.98
2	19	0.0042	0.34	12.3	0.3	1	23	153	175	153	175	0.99
3	19	1.8e-05	0.0015	19.7	1.2	2	23	181	202	181	202	0.97
4	19	0.021	1.7	10.1	0.1	1	23	208	230	208	230	0.95
5	19	0.0029	0.24	12.8	3.3	2	23	244	265	244	265	0.94
6	19	3.4e-05	0.0028	18.9	3.2	1	23	288	310	288	310	0.98
7	19	4e-06	0.00033	21.8	1.1	1	23	316	338	316	338	0.98
8	19	0.002	0.17	13.3	0.5	1	23	344	367	344	367	0.93
9	19	0.0082	0.68	11.4	1.7	1	23	377	400	377	400	0.97
10	19	3.7e-06	0.00031	21.9	1.8	1	23	479	501	479	501	0.98
11	19	4.1e-07	3.4e-05	24.9	1.0	1	23	507	529	507	529	0.99
12	19	0.00025	0.021	16.1	2.5	1	23	540	562	540	562	0.97
13	19	6.4e-08	5.3e-06	27.5	0.8	3	23	671	691	670	691	0.98
14	19	7.1e-06	0.00058	21.0	0.6	1	23	697	719	697	719	0.99
15	19	0.00012	0.0098	17.2	0.3	1	23	727	749	727	749	0.97
16	19	0.00019	0.016	16.5	0.8	1	23	755	777	755	777	0.97
17	19	4.1e-06	0.00034	21.8	3.2	2	23	881	902	881	902	0.98
18	19	6.4e-05	0.0053	18.0	1.5	1	23	908	930	908	930	0.98
19	19	1.7e-05	0.0014	19.8	1.1	1	23	936	959	936	959	0.97

Sequence Information

Coding Sequence: ATGAACTCGACTGGAACTGCAATAATAGAGACAGTAGAAAACAACACGGTTACGCTCATAGCCGTTCctttgcaaatatttcaacCAACAGTCCAGTCTCAATCCATCATCGTCGATCAAAACGTTCTCCTGAACACCCTAGCCGATGGGACGATCGTTTTGGATACTAGCCAACTCTCGGACAAAGAAATCGGGAGTTTAGACGTGGGTAACCATGATACTGTGATTCTGTCGACTGAAAACTACATTAAACCGGAGCCACCACCGGAAATCACATACTTTAACTGTAGAAACGACCCGCTGCAGGTGGAAATAGTTGAGACTGTTGCTTCTGAACCGTCTGCAGCTCCAGTTCAAGAATTACTGAAGAGTTATAAGTGTAAACGCTGTGATAAAGAGTTCTGTAAACTAAGCTTCCTGAAGCAACATGAGAAGAATCATGTTAATGAAAAGAAGTACAAATGCCTCACTTGTTCGgctagttttaatatattatctaaTTATGAGCTGCATATAGCCACGCATAGCACTGGTGATCCTACATGTCCAGAATGTGGGAAGAAATTTCAGAGGTTGGCGAGTTTAAAAGCGCATTTGATGCATCATGAAAAGGAGGAGACGTTTTACTGTCCAGAGTGTGACTTGTCGTTTTGGAATGCTGTTGAGTTGAGTGAACATTCCAAGGAGCATGGGAAGGTGCAGAAGGAAAACGAAGAAAAAGGAGGTGgagtttgtaaatattgtaaacatACGTTCAAGTCATCGTTAGAGTATAAGAAACACATGGGGGAGCATAAAAGGATGAAGAAGATGTTGCATGTGCAGTTTCGGTCGAAGAGGAAACCATTGAAAGAGCGAAGGCATCAATGCAATATTTGCAGCAAGTCGTTTCAGAAGCAGAGTCAGATAGATCGTCATATGCGGGTTCATAGTGGAGAGAAGCCGTATGTGTGTCACGTGTGTCAAAGGGGATTTAGTCAGAAGGGGTCGTTGCAGATTCATATGGTGCGGCATAGTGGAGTAAAACcacataaatgtatattatgtcCCGCAGAGTTTAGTCAAAGAGGTAACTTAAGGGCGCATATATTGAAAACGCATTCCGTTCCGAGGCCTGGAGAGAATGTGTTTTCTTGCTCTGAATGTGCGTGTGTGTTCAAAAAACTTGGGAGTTTAAATGGGCATATGACCCGTAACCACCCTGAGCAGAAAGAAGCCGATTTAAAAACGGTTATGTCACAGATTAAAGCTATGGAGGAATCACTGAATGCGGTGGATAAAGATATATTAGAGCAAGCAATGCTGCAATCTGAATTACCAGGAGTACAGAAAAACGATGCGGCTTCTACATATGTAACGTTAGCAGATTTGGGGCAAGATGGGAGTATTAGGAGGAGGCTAGTGCGGCAGAGAAAAACCGGGGATGGACGGTGGCATCAGTGTAGCTACTGTGTTAAAGAGTTCAAGAAACCGTCCGATTTAGTGCGACATTTACGCGTTCACACGCGAGAGAAACCATATCGTTGCGATTACTGTCCGAGGTCTTTTGCAGTGAAATCGACGCTGACTTCTCATATTAAGACTCATACAGAGCATAGCAGCGATCCGAAACGTCCGTTCTCGTGTTTTCATTGCGGGAAGGATTTCAAGACCGCGACTGCTGTACAAAGGCACTCTAAAATTCATAAAGACATGGTGGTGACTGATACAGTTATCACTGGAGATGTAGTTGGAGTGACTGATGGTTTAGACGCGAGGATGTTGGATATAGTCGGAGGTGAGGGCTACGTTCAAGTAGCTCCTGAAGTACCTGCTACCACTACAACAGATGAGTTAATGAGTACATTAGCTGGAGCTGAGACTGATACGTTTCTGTTGCCAGACCTTGATTTAGGAGAGTTGATTCCAGTAGCTAGTAATGAAGCTCCTCCTCCAACTCCGCCCCCTCCGTTACCAACACAAGTCGCGAACAACCCAATAATACAGTTCAGCATAACCCGCCGTAACGCATGCTCGTATTGCCCTAAATCATTCAGAAAACCATCGGACCTCCAGCGCCACCTCCGCACCCACACCGGAGAACGGCCGTTTAAATGCGACGAGTGCGCGAAGAGCTTCTCTCTGAAATCGACGTTGGAAAGCCACGTCCGAATCCACCGAGCCACCGGTGCGAAGGACTTCGCTTGTCAAGTCTGCGACTCGCTCTTCTCCAGCAAGGGCAGCCTGCAAGTCCACATGCGCCTTCACACCGGCGCCCGCCCCTTCCCGTGCCCGCTCTGCAAAATGACCTTCCGCACTTCCGGACACCGCAAGGCTCATCTGGCGGTGCATTACCGCATGGCGGATCGCACCGGGAAATCGCCGTTGGACGTGGTAACTCGTCCCGCGAAGGCCCCCGCGAAACTCCTCGAAGCCACCGTGCAGACCTTGCTGGAGGAGGAGACCCCGCAGCCCGACCCGACCCCGGAACAGGTGTTCCGGTTCGAGATCCGCACCGATGAACAGGGGCAGATCGTGGAGATCCTCCCGACTCCGGATTCCAACGCGGAGGCCGGGATCGTTCTGTTGAACGCGGCGGATCTCAATCAGGTGGGGAGTTTGCTACGGGGACCCGGCGCCAGTGCGAAGAAAATGGGGCCGACGTGCCAGTTCTGCGGGAAGAAGTTCAGGTCGAAGTATTTGCTGGATAGGCATATGAAGACGCATACGGGGGAGAAGACGTTTTCGTGCTCGCACTGCTCGCAGATGTTTAATCAGAAGAACGCACTGGAGGCGCACGAAAGGGTGCATGTGGGAAGTCGGCCGTACGCCTGCTCGTACTGTTCGAATACTTTCAACCAGAGCGGAAATCTGAAAACGCATATAAAGAGGATACACGGGAACATGCTGACGAACCTACAGATTCCACAGTCCACCCCTGCTACTACGTAA
Protein Sequence: MNSTGTAIIETVENNTVTLIAVPLQIFQPTVQSQSIIVDQNVLLNTLADGTIVLDTSQLSDKEIGSLDVGNHDTVILSTENYIKPEPPPEITYFNCRNDPLQVEIVETVASEPSAAPVQELLKSYKCKRCDKEFCKLSFLKQHEKNHVNEKKYKCLTCSASFNILSNYELHIATHSTGDPTCPECGKKFQRLASLKAHLMHHEKEETFYCPECDLSFWNAVELSEHSKEHGKVQKENEEKGGGVCKYCKHTFKSSLEYKKHMGEHKRMKKMLHVQFRSKRKPLKERRHQCNICSKSFQKQSQIDRHMRVHSGEKPYVCHVCQRGFSQKGSLQIHMVRHSGVKPHKCILCPAEFSQRGNLRAHILKTHSVPRPGENVFSCSECACVFKKLGSLNGHMTRNHPEQKEADLKTVMSQIKAMEESLNAVDKDILEQAMLQSELPGVQKNDAASTYVTLADLGQDGSIRRRLVRQRKTGDGRWHQCSYCVKEFKKPSDLVRHLRVHTREKPYRCDYCPRSFAVKSTLTSHIKTHTEHSSDPKRPFSCFHCGKDFKTATAVQRHSKIHKDMVVTDTVITGDVVGVTDGLDARMLDIVGGEGYVQVAPEVPATTTTDELMSTLAGAETDTFLLPDLDLGELIPVASNEAPPPTPPPPLPTQVANNPIIQFSITRRNACSYCPKSFRKPSDLQRHLRTHTGERPFKCDECAKSFSLKSTLESHVRIHRATGAKDFACQVCDSLFSSKGSLQVHMRLHTGARPFPCPLCKMTFRTSGHRKAHLAVHYRMADRTGKSPLDVVTRPAKAPAKLLEATVQTLLEEETPQPDPTPEQVFRFEIRTDEQGQIVEILPTPDSNAEAGIVLLNAADLNQVGSLLRGPGASAKKMGPTCQFCGKKFRSKYLLDRHMKTHTGEKTFSCSHCSQMFNQKNALEAHERVHVGSRPYACSYCSNTFNQSGNLKTHIKRIHGNMLTNLQIPQSTPATT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -