Qclu000232.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Quadriops clusia
Gene Symbol
-
Assembly
GCA_033557875.1
Location
JAWQRP010000029.1:1653-9937[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 40 0.0078 0.65 11.4 0.1 2 19 28 45 27 47 0.94
2 40 0.029 2.4 9.6 0.9 2 23 85 106 84 106 0.96
3 40 0.046 3.8 9.0 4.5 1 23 109 131 109 131 0.97
4 40 1.1 93 4.7 0.2 2 21 138 157 137 158 0.93
5 40 0.00046 0.038 15.3 1.1 1 23 164 187 164 187 0.97
6 40 0.00016 0.014 16.7 2.1 1 23 192 214 192 214 0.98
7 40 5.1 4.2e+02 2.6 0.4 3 23 224 243 223 244 0.81
8 40 1.8e-05 0.0015 19.7 2.8 1 23 250 272 250 272 0.98
9 40 2.9e-05 0.0024 19.1 1.1 1 23 278 300 278 300 0.97
10 40 7.4e-06 0.00061 21.0 2.9 1 23 306 328 306 328 0.98
11 40 0.36 30 6.2 1.3 2 20 368 386 367 388 0.91
12 40 8.5e-05 0.007 17.6 2.2 2 23 427 448 426 448 0.97
13 40 0.023 1.9 9.9 3.9 1 23 451 473 451 473 0.95
14 40 0.23 19 6.8 0.4 2 21 480 499 479 500 0.94
15 40 0.00058 0.048 15.0 4.3 1 23 506 529 506 529 0.97
16 40 5.2e-05 0.0043 18.3 3.8 1 23 534 556 534 556 0.98
17 40 4 3.3e+02 2.9 0.3 3 23 566 585 564 586 0.81
18 40 3e-06 0.00025 22.2 1.6 1 23 592 614 592 614 0.97
19 40 6.2e-06 0.00051 21.2 0.2 1 23 620 642 620 642 0.98
20 40 0.00017 0.014 16.7 2.1 1 23 648 670 648 670 0.99
21 40 0.013 1 10.8 0.8 1 23 696 718 696 718 0.98
22 40 3 2.5e+02 3.3 1.4 1 20 811 830 811 832 0.91
23 40 0.17 14 7.2 0.3 1 23 849 871 849 871 0.98
24 40 0.0032 0.26 12.7 0.9 1 23 874 896 874 896 0.97
25 40 1.6e-05 0.0013 19.9 0.6 2 20 903 921 902 923 0.95
26 40 0.00011 0.0093 17.2 0.1 1 23 930 953 930 953 0.96
27 40 0.0015 0.13 13.7 1.7 1 23 958 980 958 980 0.98
28 40 0.095 7.9 8.0 0.2 3 23 1016 1035 1014 1035 0.96
29 40 9.9e-06 0.00082 20.6 3.7 1 23 1041 1063 1041 1063 0.98
30 40 2.3e-06 0.00019 22.6 1.0 2 23 1070 1091 1069 1091 0.97
31 40 3 2.4e+02 3.3 0.4 2 22 1238 1258 1237 1258 0.94
32 40 0.007 0.58 11.6 2.3 1 23 1275 1297 1275 1297 0.99
33 40 0.045 3.7 9.0 3.0 2 23 1301 1322 1300 1322 0.97
34 40 0.00011 0.009 17.3 1.1 2 20 1329 1347 1328 1348 0.95
35 40 4.9e-05 0.0041 18.4 0.7 1 23 1356 1379 1356 1379 0.94
36 40 0.00022 0.018 16.4 0.3 1 23 1384 1407 1384 1407 0.97
37 40 3.4 2.8e+02 3.1 0.1 2 21 1442 1460 1441 1462 0.70
38 40 5.4e-06 0.00044 21.4 0.9 1 23 1468 1490 1468 1490 0.98
39 40 4e-05 0.0033 18.7 0.4 1 23 1496 1518 1496 1518 0.99
40 40 0.00023 0.019 16.3 0.9 1 23 1524 1547 1524 1547 0.97

Sequence Information

Coding Sequence
ATGAAACCatcattagaaataaaaatcgaatCGAGCTGTTCCAAACTGCCCGAGAAGAAACGGAAGCATATTAGAAAATGGGAATGTGAAACTTGCCTACAAACATTTTCTAGAAAAAGCGCATTAATATCTCATGAATCTGGGAATCAAGAAGACAGAAATGAAAGTCACCAAAATGATAAAACACCAAAACATGCAAAACAACATGGAGAAACTATACAAAACCAGGAAAAAGAATCCCATGAAGAATTAATATGCGATGTCTGTTCAGAAAAGTtttcaaacaagaaaatattccTCAAGCATTGGAAAACTCACGGCGACCACAGTTGTCCACAttgcgaaaaaaaaatttatagttatagtttGTTTACCAAACATGTTCTATCGCACACGAAAGCCAATTATTTAAAGTGCGAAAGttgctttaaattaattgatacgGAAGTCAATTTGAAGAAGCACCAAAACATATGTCTCGTGGGAGGGTTTAGATGCGAACTCTGCGATAAGATTTATAAAACGAAAGAACAAGTGAAAGGTCACGTTAGGTCAAAGCATTTAGGGTTGACCTATGATTGCGAGCGTTGTGAGAAGAAATTCAAGACTCGAGTTTCATATAAAGCCCATGTGAAGACACACGATCCAAATTACGTTAAGTTCGAAATTTGCCCAATCTGCAGCAAGACTGTGAGCGCGTTAAGCATTAAGTCGCATTTTAAGAGGCACAAAGAGAGGGAAACAATGTTCGTGTGTCAGGAATGCGGCAAAACGTTTAAGAACTACGACCGCTTTAAGACGCACTTGCGCAACCATGTTGGTGAAAAACCATTCGCTTGCAACTTTTGTGGGAAAGCGTTCTCATCGAGAACTTATTTAAGCGACCATCGAAAAATTCACACTAACCAAAGAGATCACGAATGTGAATTTTGCAACAAGAAGTTCATTCAACGGGGGAGCTTAAAAGTTCATATGCGATCGCACACAAATGAGAGGCCATACTCATTCGAACATTGGAAACTGAAACCAccattagaaataaaaaccgAATCGACTTGTTCCAAACCTCCGGAGAAGAGACGGAAGCGTATTAGAAAATGGGAATGTGACACTTGCCTACGAACATTTTCTAGGAAAAACGTGTTTACCTCTCATGAATGTGGCAATGAAAAAGATACAAAAGAATGTCGTCAAAATGAGAAAAGACTAATGAAACCACCTGTAAAACAACATGGTGGATCTATACAGAACaagggaaaatattttcacgaAGAATTAAAATGCGATGTCTGCTCAAGAACGTTTAAAAACAGGGCAAAGTTCCTCAAGCATTGGAGGACTCATGGCGACCACAGTTGTCCACATTGCGAGAAAAAAATGTCCAATTATAGTTCGTTTACCAGACATGTTCTAGCGCACACGAAAGCCAATTATTTAAAGTGCGAAACTTGctcgaaattaattgataCGGAAACCAATTTGATGAAGCACCAAAATAAGTGCCGCCCAGGTGGTTTCAGTTGCGAACACTGCGATCGGACTTATAAAATGGAAGCCCATTTGAACAGTCACGTTAGGTCGAAGCATTTGGGGTTGACCTATGATTGCAAACATTGTGAGAAGAAATTCAAGGACCAAGTTTCATATAAAGCCCATGTGAAGACACACGATCCAAATTACGTAAAATACGTAATTTGCCCCATTTGCAGCAAGACAGTTAGCGCTTTGAGCATTAAGTCCCATTTCAAGAGGCACAAGGACAGGGAAATGATGTTCGTGTGCCAGGAATGTGGGAAAACGTTTAAGAAGCGCGAGAGTCTTAAGACGCACTTGCTCAACCACCTGGGGGTAAAACCGTACGCTTGCGACGTTTGTGGGAAAGCTTTCACATCTAGGGTATATTTGAATGATCACCGAAAAATTCATACTAATCAGAGGGATTACCAATGCGAAGTTTGTTTGAAGAAGTTCATACAGCGGTGCAGTTTAATTGTTCATTTGCGATCGCACACGGATGAGAGGCCATTCAGCGGTCTTGACGTGAAATTTGAGCCTCTGGTAGAAATAAAGAGCGACGCGGAATCGTACCAATGCGACATTTGCTTTGAGGTCTTTGAAGATGACGCAGAATTCTACATGCATATGCACCAACATTCCGGGACCAAAAAATCTAGGAGAAAAGCTGTTGAGATTGCCGACATATCACCTGAAGGAGACCCAGAGCTTAAAAGGTCTAGCAGAAAATCGGAAAATGCTGATGAGACTTTAAAGAGTTTATTGTTATCCACCGTGAATCCTGGATATGCAGTTTCGAAAACGACCAAAAGGCATAGAAGAAGGTTGGACAAATCTGGGTCTTCAAATTGTGACTCTACCGCCACCCTAAAGAGAAAACGGAACAGGACTTACGAATATAGGGTTCCGAAAAAGTACTTTTGTCGAACATGTTCTGTGCCGTTCACAAACCGGCTTTTATTCGAAACCCACGAATGTATTGAGAAGGACAAAACGAAAACCAGTATTATTAATGCAAGTGAATTCACTTACAAATGTAACCTATGTCCGGAAAAAATTGTGGGCAAGACTAAATTCATGGAGCATTGGAAGATCCACGGCGGCTTCACATGTCCACATTGCGGAAGAAAGCTGTTGTCGCCCGAGACGTTCCAAAGACACATCCAAGCGCACACGAAGGACAATTACGTAAAGTGCCCCAAATGCGGCCAATCCTTTAATCACGCCACAAACTTACAAAAACATCTAGATTACAAACTGTGCAGGGGCGGCTTCATGTGCGAAATCTGCAACAAGTTGTTTTCCCAAAAAGGTGCCCTGACTATTCACGCGAATTCCGCACATTTAGGCGTCACCTACGAGTGCACGCCGTGCAACAAAGTTTTCAAATTGGAACAAAGTTACAAGTCGCACATGAAAACCCACGAGCCAGGTTTTCAAAGAACCGCCCCTTGCCATCTTTGCCATAAAGAAATCAGCACCTTGGGGATGAGGGCCCACTTGAACCAACACAAGAGAGAAAAAAGCATCTGCCAGGAATGCGGGAAGAGGATGTCCGCGGATTCCTTGAAGACGCATTTATTGGTGCACCAGGGGCTGAAGCCCCACCAGTGTGAGCACTGCGGGAAAGCATTCGCGTCCAAGACTTACCTTACCGAACACAAGAGGATCCACACGAATGAGCGGCGATGGGAGTGTAAAATATGCAAGAAGAGGTTCACTCAGGCGACTAGTCTGAAGATTCACGTTAGAACTCACACGGGCGAGAAGCCCTACGAGTGCAACTTATGTGCCGATACAGAAGTGAAATATACTCCAGTCATAGATATAAACCTGAAAACTGAGGCGGAGGACTATCAATCCACTTCTAGCTATGACGATATGGATGTGAGATATAGTCCAGTCATAGACATAATCCTGAAAAGCGAGGCAGATGGGTCTCAGTCCATCACGAGCTGTGACGATATGGAAGTGAAATATCTCCCACCTGTAGACATAAACCAGAAAAGTGAGCTGGGAGACTATCGGTGCGGCATCTTTGAGGGCGAGGCAGAACATTCTCAAACTAAGCAGATTGTAGAGGAAATTAGTCCACCATTGGCCCCccaagcaaaaaataaaactaagcCAAATAAAACTAAGGGCAAAAATAGaaggaaaactaaaagttCCTCCCTATCTAGCTATCACAAACTCACATGCGAGGGTTGTTTAATAAACTTCGGcaatacaattttgtttaaaactcaCATCTGCACCCCGACAACCGGTGGCAAAGGTTCCAAACCCAAAAACAAGACAGTTTCCTTCAAATGCGACTTTTGCTCGGAAATCTACACTGAAAAACGTGAGTTCATCCAACACCGTAAAACTCACGGTGGTCAAAGTTGTCCCCATTGCGATAGAAAACTTCAAAGTCCACATTTGTACCTCCGCCACGTCCAATCGCACACTAAAGACAACTACATCAAGTGCGACAAATGCGACCAAACCTTTATCCATAAAAATAACTTGCAGAAGCACCTAGACTTCAAGCTTTGCAGAGGCGGCTTCCTCTGCGAACTGTGCAACAAAATGTTTGTCCAAAAGGCATCTTACACCAACCACATGAATTCCGTCCACTTAGGAATCAGATACGAGTGCAAAATATGCAACAAAGTTTACACCTTGGAACAGAGCTACAAGGCGCACATGGACATGGTCCATGATCCCAATTCCGTAAAAACCGAACAATGTCCTTTTTGCAAGAAGGACATAAGCAAACGCACTATAAAAAGCCACATTGCGTTCCACAAAAGAGGCAAAAGCGTTTGTCCGGAATGTGGAAAACGAATGATGCCGGCGTCTCTAAAACCTCATATGTTAGCCCATCAGGGCCTTAAACCGTTCAAATGCAATTTCTGCGAGAAATCGTTTGCTTCTCAACCTTATTTGAAGAATCACATCATGATACACACGAAGGAAAAGCGCTATGAGTGTCCCATATGCAAGAAGAAGTTCGTCCAGTTTGGTGCTAGGAATGTTCACATCAGGACTCACACGGGCGAGAAACCGTATGAGTGTAATCTCTGCGATAAGAAGTTTATTACGGGGTATTTGTTGAAAGTACATAAACAGAAGGAGCACAAATTACTTGGATaa
Protein Sequence
MKPSLEIKIESSCSKLPEKKRKHIRKWECETCLQTFSRKSALISHESGNQEDRNESHQNDKTPKHAKQHGETIQNQEKESHEELICDVCSEKFSNKKIFLKHWKTHGDHSCPHCEKKIYSYSLFTKHVLSHTKANYLKCESCFKLIDTEVNLKKHQNICLVGGFRCELCDKIYKTKEQVKGHVRSKHLGLTYDCERCEKKFKTRVSYKAHVKTHDPNYVKFEICPICSKTVSALSIKSHFKRHKERETMFVCQECGKTFKNYDRFKTHLRNHVGEKPFACNFCGKAFSSRTYLSDHRKIHTNQRDHECEFCNKKFIQRGSLKVHMRSHTNERPYSFEHWKLKPPLEIKTESTCSKPPEKRRKRIRKWECDTCLRTFSRKNVFTSHECGNEKDTKECRQNEKRLMKPPVKQHGGSIQNKGKYFHEELKCDVCSRTFKNRAKFLKHWRTHGDHSCPHCEKKMSNYSSFTRHVLAHTKANYLKCETCSKLIDTETNLMKHQNKCRPGGFSCEHCDRTYKMEAHLNSHVRSKHLGLTYDCKHCEKKFKDQVSYKAHVKTHDPNYVKYVICPICSKTVSALSIKSHFKRHKDREMMFVCQECGKTFKKRESLKTHLLNHLGVKPYACDVCGKAFTSRVYLNDHRKIHTNQRDYQCEVCLKKFIQRCSLIVHLRSHTDERPFSGLDVKFEPLVEIKSDAESYQCDICFEVFEDDAEFYMHMHQHSGTKKSRRKAVEIADISPEGDPELKRSSRKSENADETLKSLLLSTVNPGYAVSKTTKRHRRRLDKSGSSNCDSTATLKRKRNRTYEYRVPKKYFCRTCSVPFTNRLLFETHECIEKDKTKTSIINASEFTYKCNLCPEKIVGKTKFMEHWKIHGGFTCPHCGRKLLSPETFQRHIQAHTKDNYVKCPKCGQSFNHATNLQKHLDYKLCRGGFMCEICNKLFSQKGALTIHANSAHLGVTYECTPCNKVFKLEQSYKSHMKTHEPGFQRTAPCHLCHKEISTLGMRAHLNQHKREKSICQECGKRMSADSLKTHLLVHQGLKPHQCEHCGKAFASKTYLTEHKRIHTNERRWECKICKKRFTQATSLKIHVRTHTGEKPYECNLCADTEVKYTPVIDINLKTEAEDYQSTSSYDDMDVRYSPVIDIILKSEADGSQSITSCDDMEVKYLPPVDINQKSELGDYRCGIFEGEAEHSQTKQIVEEISPPLAPQAKNKTKPNKTKGKNRRKTKSSSLSSYHKLTCEGCLINFGNTILFKTHICTPTTGGKGSKPKNKTVSFKCDFCSEIYTEKREFIQHRKTHGGQSCPHCDRKLQSPHLYLRHVQSHTKDNYIKCDKCDQTFIHKNNLQKHLDFKLCRGGFLCELCNKMFVQKASYTNHMNSVHLGIRYECKICNKVYTLEQSYKAHMDMVHDPNSVKTEQCPFCKKDISKRTIKSHIAFHKRGKSVCPECGKRMMPASLKPHMLAHQGLKPFKCNFCEKSFASQPYLKNHIMIHTKEKRYECPICKKKFVQFGARNVHIRTHTGEKPYECNLCDKKFITGYLLKVHKQKEHKLLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-