Qclu000235.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Quadriops clusia
Gene Symbol
-
Assembly
GCA_033557875.1
Location
JAWQRP010000029.1:19236-28975[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 49 1.1 93 4.6 0.5 1 23 36 58 36 58 0.96
2 49 1.2 97 4.6 1.0 3 21 102 120 100 121 0.91
3 49 0.0024 0.2 13.1 1.3 1 23 133 155 133 155 0.99
4 49 0.001 0.086 14.2 2.4 1 23 158 180 158 180 0.98
5 49 3.2e-06 0.00027 22.1 2.3 2 20 187 205 186 207 0.94
6 49 1.5e-05 0.0012 20.0 0.2 1 23 214 237 214 237 0.97
7 49 0.00039 0.032 15.6 0.5 1 23 242 265 242 265 0.96
8 49 0.96 79 4.9 0.0 3 23 301 320 300 320 0.94
9 49 9.4e-07 7.8e-05 23.8 0.7 1 23 326 348 326 348 0.99
10 49 6.5e-05 0.0054 18.0 1.1 1 23 354 376 354 376 0.99
11 49 3.6 2.9e+02 3.1 0.3 1 12 382 393 382 396 0.87
12 49 1.1 88 4.7 0.6 1 20 594 613 594 615 0.90
13 49 0.0011 0.09 14.1 1.4 1 23 657 679 657 679 0.98
14 49 0.00033 0.027 15.8 1.0 2 20 686 704 685 706 0.94
15 49 1.4e-05 0.0011 20.1 0.1 1 23 713 736 713 736 0.95
16 49 0.00023 0.019 16.3 1.9 1 23 741 763 741 763 0.98
17 49 0.007 0.58 11.6 0.4 3 23 801 820 799 820 0.97
18 49 0.00011 0.0087 17.3 0.4 1 23 826 848 826 848 0.97
19 49 0.001 0.085 14.2 0.6 1 23 854 876 854 876 0.98
20 49 8.3 6.9e+02 1.9 0.3 3 12 884 893 884 895 0.91
21 49 0.041 3.4 9.2 0.4 1 20 1044 1063 1044 1065 0.94
22 49 0.43 36 6.0 0.1 1 23 1078 1100 1078 1100 0.97
23 49 4.4e-05 0.0036 18.5 1.5 2 21 1104 1123 1103 1124 0.94
24 49 1.7e-06 0.00014 23.0 0.6 1 23 1131 1154 1131 1154 0.97
25 49 0.00016 0.014 16.7 4.5 1 23 1159 1181 1159 1181 0.98
26 49 4.6 3.8e+02 2.7 0.4 3 23 1219 1238 1218 1238 0.88
27 49 8.4e-07 7e-05 23.9 0.5 1 23 1244 1266 1244 1266 0.98
28 49 3.1e-05 0.0026 19.0 0.3 1 23 1272 1294 1272 1294 0.99
29 49 4.1 3.4e+02 2.9 1.5 1 11 1300 1310 1300 1312 0.91
30 49 4 3.3e+02 2.9 0.3 2 20 1390 1408 1389 1410 0.89
31 49 0.16 13 7.3 6.7 1 23 1450 1472 1450 1472 0.97
32 49 3e-05 0.0024 19.1 0.8 2 20 1479 1497 1478 1499 0.95
33 49 3e-05 0.0025 19.0 0.8 1 23 1506 1529 1506 1529 0.97
34 49 0.00013 0.011 17.0 2.1 1 23 1534 1557 1534 1557 0.97
35 49 4.4 3.6e+02 2.8 0.4 2 23 1566 1586 1566 1586 0.89
36 49 0.025 2.1 9.9 0.2 2 23 1592 1612 1591 1612 0.97
37 49 2.8e-05 0.0023 19.1 2.2 1 23 1618 1640 1618 1640 0.98
38 49 6.6e-05 0.0055 18.0 3.1 1 23 1646 1668 1646 1668 0.99
39 49 0.016 1.4 10.4 2.6 1 23 1674 1697 1674 1697 0.96
40 49 0.0015 0.12 13.7 1.0 2 23 1795 1816 1794 1816 0.97
41 49 0.00015 0.013 16.8 5.5 1 23 1819 1841 1819 1841 0.97
42 49 4.6 3.8e+02 2.7 0.7 2 21 1848 1867 1847 1868 0.92
43 49 0.00059 0.049 15.0 1.8 1 23 1874 1897 1874 1897 0.97
44 49 0.0016 0.13 13.6 3.4 1 23 1902 1924 1902 1924 0.98
45 49 1.1 93 4.7 0.2 3 23 1934 1953 1933 1953 0.83
46 49 7e-05 0.0058 17.9 3.5 1 23 1960 1982 1960 1982 0.95
47 49 9.8e-05 0.0081 17.4 0.2 1 23 1988 2010 1988 2010 0.97
48 49 2.8e-06 0.00024 22.3 1.1 1 23 2016 2038 2016 2038 0.98
49 49 0.00023 0.019 16.2 1.7 1 23 2044 2067 2044 2067 0.95

Sequence Information

Coding Sequence
ATGGGAAAAAAAGGCTTAGTGCTAGTTCACAATTACAGATGTGACGCAATAGACGTGAAATATAACCCAATCACAGACGGCATCCTGAAAAGTGACGTGAAGGACTATCAATGTGACATTTGCTACGATTTGTTTGAGGATGAGGCAGAATTCTTCGTGCACATGCACGATCATTCTCTGCGAAAGGAATCTAAGCAGGAGGTAAACTCCCTGTCGGCCGTCGAATCGGAAGATGTAACTTcctcaaaaaagaaaacaagaaaaaagcAAGTTCGAAAAGGCcgcacaaataaaaaatggatatGTGAAAGTTGTTCGACAAGTTTCACTAATAAGCTTCTATTTGATACACACATATGCAATACAGAGggttattctagaaaaaatgTGCTAACCTTCAAATGCGACTTTTGTCCTGAAATTTACACTGAAAAAGACGAATTCTTCGAACACCGAAAGACGCACGAGGGTTACAGCTGTTCTCACTGCGATAAAAAATTTCTAAGGCCCGATTTGTACGAACGTCACGTCCAATCGCACACTAAGGATAATTACATAAAGTGCCATGATTGCGGGAAATCTTTTAACCATCAAACTAACTTGCAAAAGCACTTAGATTACAAACTTTGCAGAGGCGGCTTTATGTGCGAAATATGCAACAAAATGTTCTCTCAAAAGGGAGGTTGGACTATTCACATGAATTCTGTGCACTTAGGAGTGAGATTCGAGTGCAAAATATGCGATAAAGTTTACACATTGGAACAGAGTTACAAGACGCACATGGACATGGTGCATAATCCTAATTCCGTGAAAACGGAAAAATGCCCTGTTTGCCAGAAGGACATAAGTAAACGTGGTATAAAAAGGCACATTGCCTGTCATAAAATGGGTAAAAGCCTTTGTCCCGAATGCGGAAAACGACTTTGGCCGGCTGCCCTACAAACACATTTGTTAACGCACCAGGGGATTAAACCCTTCAAATGCGAGGACTGCGGGAAATCATTCGCTTCTAAACTTTACTTGAGGGGGCACATGATGACACATACGAACGAGAAGCCTTATGAGTGTCCCATATGTCATAAGAAGTTTGTTCAATTGGGTTCTAGGAATATTCACGTCAGGACGCATACTGGCGACAGACCCCATGAATGCAACATGTGCGATATGAAGTTTTATACGGGATCCGACAGCATTGATGTGAAATATGAGCTTATACAACCAAAAGAAAGCGACTCTGAAACGTACCAATGCGACTTCTGCTATGATGTGTTTCACGATGATATCGAGTTTTTCATACACATGCACCAACATTCCATGCCCAAAAAATCTAGGAAAAAAGGCGAAAGCGCCAAAGACATAAAGATATCTCCTGACGCTCTTACCAGGTCGAAAAATATACAGAACAAGGTTAAGAAGACCTTACAGACATCTGCTGAAAGGCAACCTAATCTTGCAAAGTCGAAGCAGAAACGGGGAAAGGTGAACCGGGTTTTAAAGATGCCCCCTGAATGGCACCCAAGCCTTGAAAGATGGAAGAAGAAACAGGAAAGTGAGGATCAGACTTTAATGTCATCTTCTGAAGGACATCCTAGTCTTGAAAAGGCGAAGGAAATACCGGGAAGCATggatcaaaaagaaaaacctgTGTCTTCCGCGAACACTGATAGCGATGATTCAAAACCACgtagaaaatatagaaaacggGAAACACAAGGTGACTTGACCACAACGCAAAAGAGAAAAcggaagaaaatttataagaattatCCTGTAAAAAAACACGTATGTGAAACTTGTTCCATGACATTCACTCCCAGAATTTTATTGGATACACACGAATGTGTTGGAAAGGACAATGCGGGAACCAGTATTAAAACCATGAATTCATTCACTTACAAATGCAATTTCTGCCCGGAAAAAATTTTGGGCAATACCGAATTCATGGATCATTGGACGGCTCACGGTGGCTTCACTTGCCCACATTGCGGTAGAAAGCTGTTGTCCCCCAGTACTTTCGAAAGACACATCCAATCTCACACGAAAGACAATTACATACAATGCGAGAATTGCTTTAAATCCTTTAATCACGCCACAAACTTACAGAAACACCTTGATAACAAATTGTGCAGGGGCGGCTTCATGTGCGAAATTTGCAACAAAGTTTTTTCCCAGAAGGGCGGCCTGGCCCAACACATAGATTCTATCCATTTGGGGGTTACTTACGATTGTAAGACGTGCAATAAAGATTTCAAATCGGAGTATTGGTTGAAGATGCACTTGACAACCCACGAGCCGAATTTCCGAAAAACCACCCCTTGTCATCTttgcaaaaaagaaattaaaactctTCACCTGCAGAAACACTTGAAGGAACACACatcaaaaaaggaaaaaagcaTATGTCAGGAATGCGGAAAGACAATGACCGCAGAAAgcttaaaaacacatttacgAACCCATCAGGGGCTTAAGCCGTATGCGTGTGAGTTCTGTGAGAAAGCATTTGCTTCGAAAGTTTACCTGAAGAATCACAGGATGATCCACACGAACGAGAAACGCTATGAATGTCCCATATGCCATAAGAAATTCGTTCAAGTTGGTACTAGGAATATTCACGTCCTGACCCACACTGGCGAGAAACCCCACGGATGCAACGTTTGCGATAAGAAATACAGCAGCATTGACGTGAAATATGACCCGTTCcgagaaataaaaatcgaacCGGAAGCGTACCAATGCGATATCTACTATGATGTGTTTAAGGATGTTGCTGAGTCCTACACGCACGTGACTGAACATTATCTGCCCGAACAATCTATGGAAACCATTGTGGACGCTCAGGACATAAAACTATCTCCTGAAAAGCTTATTATACAGTCGAATGCGAAACCGGAGACAATGGACCAGGCTATAAAAACATTTCCTGAAAATCACCTTCCGTTTCAAAGGTCGGAATGTGTTGATCAGAGTGTATCTTTTTGGAAGTCAAATATCGGCGCTTCTAAGCCACGTAGAAGATACGGAAAATGGCGGGAAGAGCTGGACGAATCTGTTTTTGCAGAAGACGACTGTTCCACCATGCAAAAGAAAGAACGAATGATAATTTATAAGGATAAACGTGCTAAAAAATACGTATGCGAAACTTGTTCTATGAAGTTTATTTCCCGATTTTTATTGGAAGCACACGAATGCGTTGAAAAGGAAATTCCAGAAACCACGAGCACACTCACTTACAAATGCAATTTGTGTCCGGAAAAAATTGTGGGGAATACCGCATTCATGGAGCACTGGACGACTCACGGCGACTCCACTTGCCCTCATTGCTTTAAATCCTTTAATAATGCCACAAATTTACAGAAACACCTGAATTACAAACTGTGCAGTGGCGGATTCATGTGCGAAATTTGCAACAAAGTGTTTTCCTACAACACCGGCCTGACCAAACACATGAATTCTATCCATTTGGGGGCCACTTTTGAATGTCAGACGTGCCATAGAGTTTTCAAAACCGAGTCTAATTACAAGATGCATCTGACAACCCACGAGCCGGGCTCGCAAAAAACAACACCTTGcgatatttgcaaaaaagaaatcaGTACTTCTCTGATTCGTCAACACTTGATTCTGCACACATCCAAAGGGAATAAAGGCATGTGCAATGTTTGCGGGAAGATAATGAACTTAAATAGCTTAAAATCGCATTTATTTGCCCATCAGGGGCTTAAGCCGTATGCGTGTGGCTACTGCGGTAAAGCATTTTCTTCGAATGATTACCTGAGGAATCACAAGAGGATACATACGAACGATAAGCGCTATGAATGTCCTATATGCCAAACGAAGTTCAGTCAACGTGGTGCTAGGAACATTCACATCAGGACGCACACTGGAGAGAAACCCCACGAATGTAATTTTTGCGACAAGAGTTACAGATTTGACAAAATAGAGCTGAAAGATGAACCGCTCATAGAAAATATCCAGAAAGCTGATGTGGACGACTATCAAAGTGATGAGAAAGAATTGTTCGTTCACATGGACGAGCTTTCTCTTCCTACTTCGAGTAAGGAAGAAACTTCTTCAAGTAAGGAAATACATCCAAGTAAGGAAGGAAGTTTAAGTAAGGAAGGAATGGAAAAGCAAGTTACAAAAAGTTTGGCAAATAAACAATGGATGTGTGAAAGCTGTTCCATAAGTTTTACCAACGAGCTTCTGTTGGACACACACGTATGTAATACAGAGGAACAGGTTGCCTCTTCCGGAAATCAGGCACTGTCTTTCAGATGTGacttttgctgcaatatttacaatcaAACTAATGAGTTCCTCAAACACCGACAAGCGCACATGCGTTTCTCTTGCCCCCATTGCGACAAAAAATGTTCAACTCTCCACATTTACGAGCGGCACGTCCAATCGCACACTAAAGACAACTACGTGAAGTGCAACGAATGCGGGAGATCTTTTAATCATCTAACCAATTTGCAGAAACACTTGGACAACAAAGTTTGCAGCGGCGGCTTCGTTTGTGAAATATGTAACAAATCGTTTACTTTGAAAGTAAGTTACACTATTCATATGAATTCTACCCATTTAGGGGTGAGATACAATTGCAACATATGCAACAAAACTTACACAATGGAACAGACTTACAAGAAGCACATGAAGATGGCGCATGACCCAAATTTcgtaaaaactgaaaaatgtCCTGTTTGTCAGAAGGACTTAAGCAAACTTTCCATAAGACGCCACATTGCCCAACACAAGAGAGGTAAAAGCGTGTGCCCCGAATGCGGAAAACGGTTACTGCCACAATCTCTAAAAACACATTTGTTAACCCACCAGGGGCTTAAACCCTACAAATGCGACCACTGCGAGAAAGCATTTGCCTCGAAAGTTTACCTGAGGAATCACAAGATGATCCATACGAACGAGAAGCGCTATGAATGTCACATATGCAACAAGAAATTTGTTCAATTCGGCTCTAGAAATATTCATATGAGGACGCACACTGGGGAACGACCACATGAATGCAATATTTGCGATATGAAGTTTTATACGGGGAATTTACTAAAAGTACATAAGCAGAAGAAGCACCTCCGCTGTATTTGCATTTCCAGATTCGACCGTTGGAAACTGAAACCACCATTAGAAAGAAAAACCAAGTCGTCTTGTCGCAAATCACCCGCGGAGAGACGGAACCGTATTAGAAAATGGGAATGTGAAACTTGCCTAGAAAAGTTTTCTACGCAAAACGCATTTGTCTGTCACGAATGTGGCAAtccaaaagataaaaatggaaGTCACCAAAAAGAGAAAATTCCAAAACTTGCAGAACAACACGGGGCATCTATACAAAATGAGGGAAAAAAATCTCAGAAAGAATTAACATGCGATGTCTGTTCAGAAAAGTTTTCAAAGAAGGGACTGTACCTCAAGCACTGGAAAACTCACGCCGACCACAGTTGTCCACATTGTGAGAAAAAATTTTCCACCTATAGGTCGTTTACCAGACATATTCTAGTGCACAAGAAAGCCAAATCTTTAAAGTGCGAAATTTGctgtgaattatttaaaagtgaaATCAAATTAAAGAACCACCAAGAAATATGTCGTGTGGGAGGGTTTAGTTGCGAACTCTGCAAGAAGatttataaaacgaaaaatcAACTGAATGGTCACGTTAGGTCAAAGCATTCAGAGTTGACATATGATTGCGAACACTGTGAGAAGAAATTCAAGTACCTAGTTACATACAGAGTCCATGTGAAGACACACGATCCAAATtacgaaaaatacaaaatttgtccAATTTGTAACAAGACGGTGAGCTCTGTGAGCATTTATTCCCATTTAAGCAAGCACAGAGACAGGGAAACGAAATTCTTGTGCCAAGAATGCGGGAAAACGTTTAAGCACCGCGAGGGCTTTAATACTCACTTACGCAACCACCTTGGCGTAAAACCGTTCGCTTGCGACATCTGTGGCAGAACTTTCTCATCGAAGCCTCCTTTAAGCGATCACCGAAAAATTCATACTAATCAAAAAGATCACGAATGCGAAATTTGCGGCAAGAAGTTTATACAGAGAGGTAGCTTTAATGTTCACATGCTAACGCACAAGGAGGAGAGGCCGTACGCATGTTGTTTATGTGATAAAAGCTTCATTACTAAGGGCTATTTGACTTCTCACAGGGCGAAAGCTCATACAGAAATTCGacagaagaaataa
Protein Sequence
MGKKGLVLVHNYRCDAIDVKYNPITDGILKSDVKDYQCDICYDLFEDEAEFFVHMHDHSLRKESKQEVNSLSAVESEDVTSSKKKTRKKQVRKGRTNKKWICESCSTSFTNKLLFDTHICNTEGYSRKNVLTFKCDFCPEIYTEKDEFFEHRKTHEGYSCSHCDKKFLRPDLYERHVQSHTKDNYIKCHDCGKSFNHQTNLQKHLDYKLCRGGFMCEICNKMFSQKGGWTIHMNSVHLGVRFECKICDKVYTLEQSYKTHMDMVHNPNSVKTEKCPVCQKDISKRGIKRHIACHKMGKSLCPECGKRLWPAALQTHLLTHQGIKPFKCEDCGKSFASKLYLRGHMMTHTNEKPYECPICHKKFVQLGSRNIHVRTHTGDRPHECNMCDMKFYTGSDSIDVKYELIQPKESDSETYQCDFCYDVFHDDIEFFIHMHQHSMPKKSRKKGESAKDIKISPDALTRSKNIQNKVKKTLQTSAERQPNLAKSKQKRGKVNRVLKMPPEWHPSLERWKKKQESEDQTLMSSSEGHPSLEKAKEIPGSMDQKEKPVSSANTDSDDSKPRRKYRKRETQGDLTTTQKRKRKKIYKNYPVKKHVCETCSMTFTPRILLDTHECVGKDNAGTSIKTMNSFTYKCNFCPEKILGNTEFMDHWTAHGGFTCPHCGRKLLSPSTFERHIQSHTKDNYIQCENCFKSFNHATNLQKHLDNKLCRGGFMCEICNKVFSQKGGLAQHIDSIHLGVTYDCKTCNKDFKSEYWLKMHLTTHEPNFRKTTPCHLCKKEIKTLHLQKHLKEHTSKKEKSICQECGKTMTAESLKTHLRTHQGLKPYACEFCEKAFASKVYLKNHRMIHTNEKRYECPICHKKFVQVGTRNIHVLTHTGEKPHGCNVCDKKYSSIDVKYDPFREIKIEPEAYQCDIYYDVFKDVAESYTHVTEHYLPEQSMETIVDAQDIKLSPEKLIIQSNAKPETMDQAIKTFPENHLPFQRSECVDQSVSFWKSNIGASKPRRRYGKWREELDESVFAEDDCSTMQKKERMIIYKDKRAKKYVCETCSMKFISRFLLEAHECVEKEIPETTSTLTYKCNLCPEKIVGNTAFMEHWTTHGDSTCPHCFKSFNNATNLQKHLNYKLCSGGFMCEICNKVFSYNTGLTKHMNSIHLGATFECQTCHRVFKTESNYKMHLTTHEPGSQKTTPCDICKKEISTSLIRQHLILHTSKGNKGMCNVCGKIMNLNSLKSHLFAHQGLKPYACGYCGKAFSSNDYLRNHKRIHTNDKRYECPICQTKFSQRGARNIHIRTHTGEKPHECNFCDKSYRFDKIELKDEPLIENIQKADVDDYQSDEKELFVHMDELSLPTSSKEETSSSKEIHPSKEGSLSKEGMEKQVTKSLANKQWMCESCSISFTNELLLDTHVCNTEEQVASSGNQALSFRCDFCCNIYNQTNEFLKHRQAHMRFSCPHCDKKCSTLHIYERHVQSHTKDNYVKCNECGRSFNHLTNLQKHLDNKVCSGGFVCEICNKSFTLKVSYTIHMNSTHLGVRYNCNICNKTYTMEQTYKKHMKMAHDPNFVKTEKCPVCQKDLSKLSIRRHIAQHKRGKSVCPECGKRLLPQSLKTHLLTHQGLKPYKCDHCEKAFASKVYLRNHKMIHTNEKRYECHICNKKFVQFGSRNIHMRTHTGERPHECNICDMKFYTGNLLKVHKQKKHLRCICISRFDRWKLKPPLERKTKSSCRKSPAERRNRIRKWECETCLEKFSTQNAFVCHECGNPKDKNGSHQKEKIPKLAEQHGASIQNEGKKSQKELTCDVCSEKFSKKGLYLKHWKTHADHSCPHCEKKFSTYRSFTRHILVHKKAKSLKCEICCELFKSEIKLKNHQEICRVGGFSCELCKKIYKTKNQLNGHVRSKHSELTYDCEHCEKKFKYLVTYRVHVKTHDPNYEKYKICPICNKTVSSVSIYSHLSKHRDRETKFLCQECGKTFKHREGFNTHLRNHLGVKPFACDICGRTFSSKPPLSDHRKIHTNQKDHECEICGKKFIQRGSFNVHMLTHKEERPYACCLCDKSFITKGYLTSHRAKAHTEIRQKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-