Basic Information

Insect: Quadriops clusia
Gene Symbol: -
Assembly: GCA_033557875.1
Location: JAWQRP010010717.1:4142-6478[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.014 35 5.4 0.4 12 34 122 143 117 153 0.72

2 10 0.0028 7.2 7.6 0.4 18 40 156 175 145 178 0.85

3 10 1 2.6e+03 -0.6 0.9 15 37 181 200 176 205 0.72

4 10 0.00021 0.53 11.2 3.1 12 40 206 231 196 235 0.84

5 10 0.021 54 4.8 0.5 13 39 235 258 231 261 0.84

6 10 0.0042 11 7.0 0.1 15 40 638 660 631 663 0.83

7 10 0.0071 18 6.3 0.9 18 31 669 682 661 693 0.72

8 10 6.3e-05 0.16 12.9 0.7 11 41 690 717 685 720 0.86

9 10 0.011 27 5.7 4.1 1 41 709 745 709 748 0.91

10 10 0.037 94 4.0 2.0 3 29 739 764 737 774 0.80

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.014	35	5.4	0.4	12	34	122	143	117	153	0.72
2	10	0.0028	7.2	7.6	0.4	18	40	156	175	145	178	0.85
3	10	1	2.6e+03	-0.6	0.9	15	37	181	200	176	205	0.72
4	10	0.00021	0.53	11.2	3.1	12	40	206	231	196	235	0.84
5	10	0.021	54	4.8	0.5	13	39	235	258	231	261	0.84
6	10	0.0042	11	7.0	0.1	15	40	638	660	631	663	0.83
7	10	0.0071	18	6.3	0.9	18	31	669	682	661	693	0.72
8	10	6.3e-05	0.16	12.9	0.7	11	41	690	717	685	720	0.86
9	10	0.011	27	5.7	4.1	1	41	709	745	709	748	0.91
10	10	0.037	94	4.0	2.0	3	29	739	764	737	774	0.80

Sequence Information

Coding Sequence: ATGGAGTTTGATCCAATTCACATTGAAACACATCAAGATCCCCCGGCTTGTAATCCAATTCCCTATGAAATGGCAACTATAAAGGAAGAAGTTTTATCTGAAGGACCTTTAGAAGCAGAATTGGAACCTTTAGAAGCAGAATCGGGACCTTTAGAGATAGCACCAAAACCTTTAAAGATAGAACAAGAATCTGAAAATTTAGTACCTTTGGAGGTAGTACCTTTGGAGGTAGTGCCTTTGGAGGTAGTGCCTTTAGAGGTAGTCCCTTTAGAGGCAGGACCAGAACCTGGAGTTTTAGCCAAGATCAAACAAGAGAATGTCGTAGACGACAATCGAATCCTCCTTGGAATCCTCGAGCGCCCGATCAAGGTAAAACGGTTCGTTTGCATGGTTTGCCAGAAGAGTTTTACCCAAAGAGGTACTTTGAATGTCCATTTGAGGATCCATATGCAGGAAATGCCGTACGCCTGCTCGTATTGTGGGAAACCTTTCGCTGATAAGTCGAACTATAGGAGGCACCTGAGGATGCATACCAATGAAAAACCATATACTTGCTCCGTTTGCCAGAAGAGCTTCACCTTGAACAGTACTCTGAAGCTGCACATTGCGACACATACCAAGGAGAAACCGTATGTTTGCAACGTTTGCCACAAGAGGTTCACGCAGAGCAGCAATTTGCGGCTTCACCTGAAGTACCACAGCAAGGAGGAGGTTTATCCTTGCCAATTGTGCGGGAAGAGGTTTGCGCATTTGTCAACTTTGCGTAGACATGTTAAGATTCACGGTGGTGGTGAGATGGTTAAGGAGGAATTTAAGGGGTTTCCCCTGTTTGATGGTGCGAACCCTCTTGGGGAAGTCCAAACCAAGagtgaagaagaagaagaagaggagaGTTTGGTTTTTGATTTCTCCGGAGAGTCAACTGGGGAGATGTCTTCCACCATTGCGCAAAGGTGTGCAGTTGTGAATTTTGCTACGAATGAAGAAGAATCTTCAGATGACGCGTTTTCTACAAACGAACAATCTTCGACAATTGAAGAAACTTcggcaattggagaaacttcGATAATTGGAGAAACTTCGACAAATGAAGAAAGTTCGACAAATGAAGAAACCTCGACAATCGAACAACCTTCGACAAGAGAGCAAGCTTCGACAATCGTTCGTTTTCCAAGAAATCAGTTTTCCGACTTGGTAGAAGCTTCGTCTTCTAACATACAAACGTTTCTAACCGACCACATGTACGCGAGTACCAGTCAAGTCGTTGGCACCAGACAAGTTGTTGGTACCAGACAAGTTGTTGGTACTAGCCAAAATGTTGGTACCAGTAAAATGGTTGGTACCAGTCAAATTGTTGATACCAGTCAAATTGTTAGTACCAGTCACGATGTTGATACCAGTCAAATTGTTAGTACCAGTCACGATGTTGATACCAGTCAAATTGTTAGTACCAGTCACGATGTTGGTACCAGTCAAATTGTTGGTACCAGTCAAATTGTTGATATCAGTCAAATTGTTAGTACCAGTCACAATGTTGGTACCAGTCAAATTGTTGGTACCAGTCAAATTGTTGATACCAGTCAAATTGTTAGTACCAGTCACGTTGTTGGTACCAGTCAAATTGTTGGCACCAGTCAAATTGTTGATACCAGTCAAATTGTTAGTACCAGTCACGTTGTTGGTACCAGTCAAATTGTTGGTACCAGTCAAATTGTTGGTACCAGTCAAATTGTTGGCACCAGTCAAATTGTTAGTACCAGCCAAGAAGAGAAGATGTACCCTCCAGTGACCTACCAACCAAACCTCCAGTACTTCCCCCTGCAGATAAAACAGGAATCTTTCCTACGAGATTCCCTAGAGGTCGTCCTCTTCGAACCTCCAAGACCGGAAATGAAACCCCAGAAGAACAATAGCGAATTCGTTTGCACGATTTGCGACAAACCGTTCTCAACCAGCAGCTCCCTGAAGTACCACCTAAAAGTCCATACGGGAGAGAAACCGTACAACTGCAACGTCTGCGGGAAAAACTTCACACAGAAAGGGAGTCTTAACGCCCATCTGAGGATCCACATGCAAGAGACACCCTACACCTGCGAATTCTGCCAGAAGACCTTCACCGACGGATCTAACTACAAAAGACACTTAAGAACCCACACCAAAGAGAGGCCGTATTCCTGCACCGTTTGCCAGAAGAGTTTCTCTTTGAATAGTACCTTGAAGTCGCATTTACGTAGCCATACCCAAGAGAAGCCGTACACTTGCACGATTTGCCAGAAGAGTTTCGCGCAAAGCGGCTACTTTGCCATTCACAACAAAACTCACCAGAAGCAATGTTAA
Protein Sequence: MEFDPIHIETHQDPPACNPIPYEMATIKEEVLSEGPLEAELEPLEAESGPLEIAPKPLKIEQESENLVPLEVVPLEVVPLEVVPLEVVPLEAGPEPGVLAKIKQENVVDDNRILLGILERPIKVKRFVCMVCQKSFTQRGTLNVHLRIHMQEMPYACSYCGKPFADKSNYRRHLRMHTNEKPYTCSVCQKSFTLNSTLKLHIATHTKEKPYVCNVCHKRFTQSSNLRLHLKYHSKEEVYPCQLCGKRFAHLSTLRRHVKIHGGGEMVKEEFKGFPLFDGANPLGEVQTKSEEEEEEESLVFDFSGESTGEMSSTIAQRCAVVNFATNEEESSDDAFSTNEQSSTIEETSAIGETSIIGETSTNEESSTNEETSTIEQPSTREQASTIVRFPRNQFSDLVEASSSNIQTFLTDHMYASTSQVVGTRQVVGTRQVVGTSQNVGTSKMVGTSQIVDTSQIVSTSHDVDTSQIVSTSHDVDTSQIVSTSHDVGTSQIVGTSQIVDISQIVSTSHNVGTSQIVGTSQIVDTSQIVSTSHVVGTSQIVGTSQIVDTSQIVSTSHVVGTSQIVGTSQIVGTSQIVGTSQIVSTSQEEKMYPPVTYQPNLQYFPLQIKQESFLRDSLEVVLFEPPRPEMKPQKNNSEFVCTICDKPFSTSSSLKYHLKVHTGEKPYNCNVCGKNFTQKGSLNAHLRIHMQETPYTCEFCQKTFTDGSNYKRHLRTHTKERPYSCTVCQKSFSLNSTLKSHLRSHTQEKPYTCTICQKSFAQSGYFAIHNKTHQKQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01287400;
90% Identity: iTF_01287400;
80% Identity: iTF_01287400;