Basic Information

Gene Symbol
-
Assembly
GCA_033557875.1
Location
JAWQRP010009992.1:4172-6607[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.0012 1.8 9.6 0.0 3 24 4 25 2 26 0.91
2 2 4.1e-07 0.00062 20.7 0.5 21 45 39 62 33 63 0.89

Sequence Information

Coding Sequence
ATGGCACGCTCTTTTTCTGATGCGGAAGATGAAATACTAGTTGAAGAGGTGGCAAATCATCCAGTATCGTGGCAACTGTCGCATCCTTTGTACAAAGATCAACGCGTAAAGGACAACTCGTGGTCAGAGATAGCCAGCAAAGTTGGCAAACCAGttgatcAGTGCAGAAAGCGTTGGAGGAATATAAAAGATACTCATGACAGAAGAAAAAAGATCAAAACGGGATCAGCAGCTAGTCCTacaaaaaaaggaaagaaatggGTTCTTGCTGATAAATTATCATTTCTTCGAACTGGTGAAGAACAGAGAGTATCCTTCACCAACATTGTTGAAGAGGTAATAGACGATGAAAATGAAACCAATATGTTTGAGCCATCTTTAATGGAAGATACATATGGTGGAGAGTCCTCAATAATGACAACCTCAACACCTACACCGGTAGCAACGCCGACTCCTTCACCTTCACTAGCGCCATCCCAACAGTTCTCCAACATGTCATATAGGGAAACaaccaatttaaaaagatCTAACAACAGAAGAACAATAATTTCCTCTTTAGAAGAGAGGGCTGCTGAAAGaaacgatatttttaaaaagttgatcTCAATCGAAGAGCAAGAAGACGAGATTGACCTCTTTTTTCAAAGTCTAGCGAAATCTGTCAAAAAACTGCGGCCTGACCTCCAGCGCCGTGTGAAGGCTGAGGTACTGGCCTCAGTTAATAGGGCAGAAGATGATTGTATGGCTTTTCCACCAATTGAAGAAATACCAACATCTGCTTCAGAACACTATACTCAATTATGA
Protein Sequence
MARSFSDAEDEILVEEVANHPVSWQLSHPLYKDQRVKDNSWSEIASKVGKPVDQCRKRWRNIKDTHDRRKKIKTGSAASPTKKGKKWVLADKLSFLRTGEEQRVSFTNIVEEVIDDENETNMFEPSLMEDTYGGESSIMTTSTPTPVATPTPSPSLAPSQQFSNMSYRETTNLKRSNNRRTIISSLEERAAERNDIFKKLISIEEQEDEIDLFFQSLAKSVKKLRPDLQRRVKAEVLASVNRAEDDCMAFPPIEEIPTSASEHYTQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-