Qclu008859.1
Basic Information
- Insect
- Quadriops clusia
- Gene Symbol
- SMARCC2
- Assembly
- GCA_033557875.1
- Location
- JAWQRP010002479.1:11215-14995[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-14 6.5e-11 43.1 0.1 3 44 596 637 594 639 0.95 2 2 5.2 8e+03 -2.1 0.6 6 16 744 754 743 757 0.86
Sequence Information
- Coding Sequence
- ATGATAGCATTTGGCCCGAAGAAGGATGGAAGTCCTAACATAAAATACTTTGAGTCCTCCGAGACCCTAACAGCCCTGGAGGGCGTAAGACAATGGCTACAAAAGTCGGCAAAGAAGCATGTCCAATCGGACCCCCCTACCAACAAAACCCTGTCTTCGCTCATTGTCCAGCTTTTACAATTCCAGGAGGACAACTTgggtaaaaatattcaaaagcCTCCGATGACGAGAATCCCCGTTAAGTACTTCATGGATTTCAAACCGGCGGGAGCACTTTGTCACATCCTGGCCACAGCTTTTCGGTTCAAGACAGAGCAGAACTGGCGCAGGTTTGAGTTCCAAGTAGGGAAAAATGCTGCTCGGTTAGATAGGCTAATCGACATGTTCCAAGCTATCGAGAAATCCTTAGTGCAAAGCAAGTTGTATACGTTACCCATCGTGCACGTTAAGCCGGAAATCGACAAGGGATTAGCGGCAAAGCTGaaagagattattaaaaaacgaggAGGACAAATTGTCGATTCGGATGAAAATGCAACTCACATTTTGTATCCAGCATGTGATCCATTAGAGGAGGAGTATGCTCGACCTGGGTATAAGCGTGAAAAAATGATCATGATGCATTGGTATTATTTCCCTGAATCTTACGACACCTGGGTCAGCATGGAAGGAGCTTTAGAATCTCTTTCAATGGATTCGCCTTCTCCCCACTCGGGACCTTGGAGGATTTCTTCTACTTGGCTGCTCGATTCCGATCAATACAATGAATGGATGTCTGAAGAGGATTACGAAGTTGATGATTCTGGACGCAAAAAGGTCCACAGAAATAGACTTTCCGTTGAAGATTTGATGAACCCCTCCGGGGACCGAGATAgtaagaagaaaaacaaacggAAGCGGTCTCCTTCCCCTCCTTTAAAGCAAGCTGGAAAGCGGAAAAGTGGCCGAAGCCCAGCTGTTGGTAAGAAGACAAAACCTGATGAACCCGAGGAAGATGACTTAACCAAGGAAATGGATGAACCCACTCCCGAACCGAACATCTCTGAAGTAAACCCTACGCCTACAGGCCAGCCTGGTAAAAAGGATCACGAATTGCAGCCTTTAAAAGGCGGCTCGGTTATAGATCTGGATGAAGCAGAAGAGCGTGGGGAAGACTCTCAAACTGGGAAAAACAGCGACACTAACACTACTCAGGATGACAATGTAAATGAACAAGAAGACAATGTAACAGAACAAACACATCACATTATCATACCGTCGTATTCGGCTTGGTTCGATTACAATTCTATTCACGAGATTGAGAAGCGAGCTCTTCCGGAATTTTTCAACGGAAGGAACAAATCGAAGACTCCTGAAATCTATTTGGCGTATAGAAACTTCATGATTGATACTTACAGGTTGAATCCGACTGAGTACATTACAAGCACGGCTTGTCGCAGAAATCTAGCTGGTGACGTTTGTGCCATTATGAGAGTCCATGCTTTCCTGGAACAGTGGGGTTTAATCAATTATCAGGTTGATACGGATTCAAGACCTACTCCCATTGGGCCTCCCCCTACTTCCCATTTCCATATCTTGTCGGATACACCTTCTGGTTTGCAGCCTGTGAATCCTCCAAAAACTGCTCAGCCAAGCGCTGCGAAAACTCTTCTCGATTTGGATCGTGCACCAGACGGCAAGAAGGTAGAAGCTGCCGAGCCGGCTGGTGGTTTCGGATTGAAACTCGATCAGTATACTAAGAAACCGGCCGTACTGCGGAATAAAAATGCAGCTAACCTCACAAGAGATTGGACCGAGCAGGAGACATTAATGTTGCTCGAAGGCTTGGAAATGTACAAGGATGACTGGAACAAAGTTTGCGAGCATGTCGGTTCACGAACACAAGATGAATGCATTTTGCACTTCTTGCGCTTGCCTATCGAAGACCCGTACTTGGAAGATCCGGAAGCTGGTGGTGCCCTTGGTCCCTTGGCATACCAGCCAATTCCTTTCAGTAAAGCGGGGAACCCCATTATGTCAACCGTTGCGTTTTTGGCTTCCATTGTCGATCCGAGagttgctgctgctgctgctaaATCTGCGATGAACGAATTTGCCAATATTAAGGACGAAGTCCCAGCTGCTATCATGGATGCTCATCTAAAGAATGTGGAGGCTTCACATACTGAAGGAAAATTCGATCCGTCCGCTGGACTTTCCTTGAGTGGTATTGCTGGAACCGTGCcggaaaaagaagaagacgataaaataaagaaagaggTTGATATTAAGGAAGAAGAGAAACTGCCGGAACAACCAGAGGAGAAAAAGAACGGCATGGAATCAGAAGAGAAGAAACCCGATGAAGCTCCTCCGCAAGAAGATAAAATCGAAAAGATGGATACATCTGAAGTTAAGTCCGAAAAGGCTATTCGAGATAGCGAGATGCAAAGTGCGGCCGCGGCTGCTTTGGCCGCTGCCGCCGTTAAAGCCAAACATTTGGCCGCAGTAGAAGAAAGGAAAATCAAATCTCTTGTAGCACTTCTCGTGGAGACGCAAATGAAGAAGTTGGAGATTAAATTGAGACATTTCGAGGAGCTCGAGACGACAATGGAAAGGGAACGTGAAGGTTTGGAATATCAAAGGCAGCAGTTGATTACTGAAAGGCAGCAATTCCACTTGGAACAACTTAAAGCTGCGGAATTCCGTGCTCGGCAGCAAGCTCATCAAAGATTGCAAGCGGAACAAGGACAGTGGGCTGCCCAACAGCCTCAGACGAATCATCCAACACCATCCAACGAAACGGGACCTAGTACAACACCAACGCCTCCTTCACCGCAAGCAGCAGCTGTAGCATCACCTGCCCCACCTCACCATCATATTTAA
- Protein Sequence
- MIAFGPKKDGSPNIKYFESSETLTALEGVRQWLQKSAKKHVQSDPPTNKTLSSLIVQLLQFQEDNLGKNIQKPPMTRIPVKYFMDFKPAGALCHILATAFRFKTEQNWRRFEFQVGKNAARLDRLIDMFQAIEKSLVQSKLYTLPIVHVKPEIDKGLAAKLKEIIKKRGGQIVDSDENATHILYPACDPLEEEYARPGYKREKMIMMHWYYFPESYDTWVSMEGALESLSMDSPSPHSGPWRISSTWLLDSDQYNEWMSEEDYEVDDSGRKKVHRNRLSVEDLMNPSGDRDSKKKNKRKRSPSPPLKQAGKRKSGRSPAVGKKTKPDEPEEDDLTKEMDEPTPEPNISEVNPTPTGQPGKKDHELQPLKGGSVIDLDEAEERGEDSQTGKNSDTNTTQDDNVNEQEDNVTEQTHHIIIPSYSAWFDYNSIHEIEKRALPEFFNGRNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDTDSRPTPIGPPPTSHFHILSDTPSGLQPVNPPKTAQPSAAKTLLDLDRAPDGKKVEAAEPAGGFGLKLDQYTKKPAVLRNKNAANLTRDWTEQETLMLLEGLEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDPEAGGALGPLAYQPIPFSKAGNPIMSTVAFLASIVDPRVAAAAAKSAMNEFANIKDEVPAAIMDAHLKNVEASHTEGKFDPSAGLSLSGIAGTVPEKEEDDKIKKEVDIKEEEKLPEQPEEKKNGMESEEKKPDEAPPQEDKIEKMDTSEVKSEKAIRDSEMQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLQAEQGQWAAQQPQTNHPTPSNETGPSTTPTPPSPQAAAVASPAPPHHHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00399040;
- 90% Identity
- -
- 80% Identity
- -