Qclu011715.1
Basic Information
- Insect
- Quadriops clusia
- Gene Symbol
- -
- Assembly
- GCA_033557875.1
- Location
- JAWQRP010003748.1:599-1852[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-08 2.3e-05 24.9 0.0 5 39 1 36 1 41 0.88 2 2 3.1 4.4e+03 -1.6 0.0 23 32 133 142 127 142 0.82
Sequence Information
- Coding Sequence
- ATGCAACGAGCTATAGACAGCGTCAAAAATGAAGGTATGCCATTGCAAACGGCCGCTAAAACTTTTAAAGTGCCAAGGAACACACTAAAACGTCGAGTTCtgaataaaaacacaaatgcAACCGATAATCAAAAGCGTCTAGGGCATTACCAGAAAGTTTTTAATACGGAACAAGAACAGGAAATTGTAAGATATCTTTTAGATATGGCAGTTTGTATTTTTGGAATTACCGCAGCTGACCTGCAAAGTCTAGCGTACCAATTAGCAGTACGAAATAATGTCCCAAACAATTTCAAcaacgaaaagaaaattgcTGGAAAGGGCTGGGTTAAAGGCTTTAGACTGCGTCATCCCGAAATTGTTTTAAGGAAACCGGAGATGACTTCAGCAGCAAGAGCGCAAGCGTTTAACATACCAAATGTtacgaaatttttaaacatatcaAAGAATGTTCAGAAAAATCACTTGTACCCACCTCATAGAGTTTACAATGTCGATGAAACTGGACTGTTGACTGTTCAGTCTAAAACGTCAAACGTCTTTGCTCTGAAAGGCAGACGGCAAGTTGGTTCTCTTACATCTGCGGATCGAGGTGTGTTATGTACTTTTGCTGTTTGTACATCAGCTGGGGGAGTTTTTATTCCACCTTTTGTCATATTTCCCAGGCAGCGGATGAAAGTGGAACTCCAAGATGGCGCTCCACCTGGGACAGCTTTCGCCTGTCACCCTTCAGGATGGATGCAAAAAGAAGACCCAGTTTTGCTGGTTCTTGATGGACACGCTACCCATACGAAGAACCTTGACTTCATTGAAAAGACCCGAGCTAATCATAGCACTGTAGTTTGTCGTCCGCCTCACTGCAGCCACAAGATGCAACCCTTAGATGTATCTTTCATGGGCCCGTTCACCACTTATTATGTCCAAGCAATTGAGAGATTTCTACGAAATAACCCTGGTAGGGTTGTAACGCAATTTCAGGTATCTCGACTTCTTGAAGAGGCTTTTTTGAGTGCTGCTACGCCAAACAACGCAGTTAAAGGGTTCAGAAAATGTGGCATTGTGCTAATTAACAGAGATGTGTTTAGCGAAGCGGATTTCATTGCAGCTTCAACAACAGAAGTTCCAAACCCCTCAGCAGAGGATCAACATGAATCAGAAGAAGTAGAAAATTCGATTAAAGATAGTAGATCTGCTTTTTAG
- Protein Sequence
- MQRAIDSVKNEGMPLQTAAKTFKVPRNTLKRRVLNKNTNATDNQKRLGHYQKVFNTEQEQEIVRYLLDMAVCIFGITAADLQSLAYQLAVRNNVPNNFNNEKKIAGKGWVKGFRLRHPEIVLRKPEMTSAARAQAFNIPNVTKFLNISKNVQKNHLYPPHRVYNVDETGLLTVQSKTSNVFALKGRRQVGSLTSADRGVLCTFAVCTSAGGVFIPPFVIFPRQRMKVELQDGAPPGTAFACHPSGWMQKEDPVLLVLDGHATHTKNLDFIEKTRANHSTVVCRPPHCSHKMQPLDVSFMGPFTTYYVQAIERFLRNNPGRVVTQFQVSRLLEEAFLSAATPNNAVKGFRKCGIVLINRDVFSEADFIAASTTEVPNPSAEDQHESEEVENSIKDSRSAF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -