Qclu023303.1
Basic Information
- Insect
- Quadriops clusia
- Gene Symbol
- -
- Assembly
- GCA_033557875.1
- Location
- JAWQRP010010924.1:2026-2463[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-09 3.7e-06 27.4 0.0 5 42 1 39 1 41 0.88 2 2 0.86 1.2e+03 0.2 0.0 23 32 133 142 126 142 0.81
Sequence Information
- Coding Sequence
- ATGCAACGAGCTATAGACAGCGTCAAAAATGAAGGTATGCCATTGCAAATGGCCGCTAAAACTTTTAAAGTGCCAAGGAACACACTAAAACGTCGAGTTCTGAATAAAAACACCCATGCAACCGACAATCAAAAGCGTCTAGGGGATTACCAGAAAGTTTTTAATACGGAACAAGAGCAGGAAATTGTAAGATATCTTTTAGATATGGAAGTTCGTTTTTTTGGAATTACCGTAGCTGACCTGCAAAGTCTAGCGTACCAATTAGCAGTACGAAATAATGTCCCAAGCAATTTCAacaatgaaaagaaaattgctgGGAAGGACTGGGTTAAAGACTTTAGACTGCGTCATCCCGAAATTGTTTTAAGGAAACCGGAGATGACTTCAGCAGCAAGAGCGCAAGCGTTTAACATACCAAATGTtacgaaatttttttaa
- Protein Sequence
- MQRAIDSVKNEGMPLQMAAKTFKVPRNTLKRRVLNKNTHATDNQKRLGDYQKVFNTEQEQEIVRYLLDMEVRFFGITVADLQSLAYQLAVRNNVPSNFNNEKKIAGKDWVKDFRLRHPEIVLRKPEMTSAARAQAFNIPNVTKFF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -