Qclu009300.1
Basic Information
- Insect
- Quadriops clusia
- Gene Symbol
- -
- Assembly
- GCA_033557875.1
- Location
- JAWQRP010002658.1:7895-11559[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.8e-11 4e-08 33.7 0.0 1 39 470 509 470 513 0.90 2 4 5.9e-13 8.2e-10 39.1 0.1 1 39 524 562 524 565 0.95 3 4 4.6e-19 6.4e-16 58.7 0.0 1 45 579 624 579 624 0.97 4 4 3.4e-17 4.8e-14 52.7 0.0 1 39 631 670 631 673 0.94
Sequence Information
- Coding Sequence
- ATGTTCCAGTCCCTCTTGAAAACTGCAGACCAGCTCAAAATCAAAGGCCTCTGCGATTCCTCGGACGAGAAGGAGAACTCTTCCTCGCCCGTCTTCCTCAACAACGGTACCAACAAGAGTTTCGCCAAGTCACGCAGGACCCTATCCTCTCCCAAGCAATACAAGGGTGGCGAGCACGTAAGGAAGCACAAGCACCGAAGGGTCGAGAGGGAGGTCGAGACGGAGAAGGAACAGCCGCCTGTCGAGAGCAACAACAACAGCGTCAACAACAATAGCAACAACGTTAGCGGCAACAACGTTAGCAGCAGCAACGTCAACAGCAGCGCCAATAGCCACATCAGCAACAACGTCAACAACAGTGCCAACGGTGGCAACAGTGCCAACAGTGGCATCAGTGGCAACAGTGGCAACGGTGGCATCAGTGGCAACGGTGGCAACAGTAGCAACAACAGTGGCAACAACACTGGCAACAGCGGCAACATCGGCAACAGCAGCAACATCAGCAATAGCGGTAACATAAGCAACAGCAGCAACTTCAATAGTAGCATCTTCGGCAGCAGCAATTTTAACAGCAGCAACTTCAGCAACAGTAGCAATAACGCTAACAACAATAGTAACGCCAGCAACAGCGGCAACAACAGCGGCAACAACAGTGGCAACAACAACGGTAACAACAACAGTCACAACAACAGTCACAACAGCAGTCACAACGGTGGCAACAACGGTAACAACGGCAACAACAATAGTCACAACAGCAGCCACAATAGTGGCAGCAACAACAGCAATAACAACGCCACCAGCAAGTCGAACAACATCGGTGTTGATATTGCTCTAGATAACTCCACCGACGAAGAGGATAATGACATGCCCGATAGCTTAGATGAGGAACTCAAGAGGAAGGAAGTGACTCCGGCCCAGACGAAACCCCTAAATATGAGTCTTTTAGCCGGacaaACACTTTTCTCTCAGTTCGGAGTAGATAACGATGACTTTCCCCCGGAACCCCCTGCCCCCTCAGCAACCCCGGTTGGACATGTCGACATGCAAGATCATTCGCCAAGTAGGACATTGCTTACTAACTCTTCGATACATAGGACAGACATTTCGGattCGCACATAAAGTCcttcaatgaaataaaaaaggaagcAGACATAAAATTCGAAACATTAAGGTCCTTTGACCAGGATTCTCTACTAGAAATGGATACCTCTCACATGTCCGGCCCGGATCATTCGATGGATAGCCATGATGACTTAGATCAAGGAATGCACACGATGATGATTACTCCGGAATTAATGGGAATGATGCCTACGGGATCCTTAAGATTAgACTGTGACTCGGGAATGAAAAGCAATGGACATACGGATCACGGTGGTCGTTCTCATGGCGGGGGCCCTAAAACGTGGACACAAGAAGACATGGAGCAAGCTTTAGATGCCTTAAGAAATCATAATATGAGCCTTACTAAGGCTTCTGCTACCTTCGGTATTCCATCCACAACCTTATGGCAAAGAGCCCACCGACTAGGAATTGACACACCAAAGAAAGAAGGCCCCACGAAGTCCTGGACGGAAGAGAACTTAAATTCGGCCCTTGAAGCCTTGAGGACGGGGACAATATCGGCAAATAAAGCTAGCAAAGCGTATGGCATTCCAAGTAGTACCTTATACAAAATCGCAAGACGAGAAGGCATCCGATTGGCAGCCCCTTTCAATGCAGCCCCCACGACTTGGTCCCCAGAAGATTTAGAAAAGGCTTTGGAATCAATTCGATCGGGACAAACTTCTGTACAAAAAGCTTCCACTGAATACGGAATTCCCACTGGGACTCTTTATGGGAGGTGTAAACGGGAAGGAATAGAATTATCGAGATCTAATCCGACTCCTTGGTCTGAAGATGCTATGACGGAGGCTTTAGAAGCAGTAAGATTGGGCCACATGTCAATAAACCAAGCCGCAATCCACTACAACTTGCCTTACTCCTCGCTCTATGGAAGGTTCAAAAGAGGCATCAAGTACGATGCCGACAACCTCGACATGAACTCGGACAGCCAATCGCAATTTGACGCATCAATCTCGATGGAGTACGCCAACATGCACCAAAACCAATTCCAACAACACCAATCGAACAGCTGA
- Protein Sequence
- MFQSLLKTADQLKIKGLCDSSDEKENSSSPVFLNNGTNKSFAKSRRTLSSPKQYKGGEHVRKHKHRRVEREVETEKEQPPVESNNNSVNNNSNNVSGNNVSSSNVNSSANSHISNNVNNSANGGNSANSGISGNSGNGGISGNGGNSSNNSGNNTGNSGNIGNSSNISNSGNISNSSNFNSSIFGSSNFNSSNFSNSSNNANNNSNASNSGNNSGNNSGNNNGNNNSHNNSHNSSHNGGNNGNNGNNNSHNSSHNSGSNNSNNNATSKSNNIGVDIALDNSTDEEDNDMPDSLDEELKRKEVTPAQTKPLNMSLLAGQTLFSQFGVDNDDFPPEPPAPSATPVGHVDMQDHSPSRTLLTNSSIHRTDISDSHIKSFNEIKKEADIKFETLRSFDQDSLLEMDTSHMSGPDHSMDSHDDLDQGMHTMMITPELMGMMPTGSLRLDCDSGMKSNGHTDHGGRSHGGGPKTWTQEDMEQALDALRNHNMSLTKASATFGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWSPEDLEKALESIRSGQTSVQKASTEYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYDADNLDMNSDSQSQFDASISMEYANMHQNQFQQHQSNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -