Qclu004774.1
Basic Information
- Insect
- Quadriops clusia
- Gene Symbol
- JARID2
- Assembly
- GCA_033557875.1
- Location
- JAWQRP010001046.1:9935-13952[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.27 1.5e+03 0.5 0.0 30 82 287 332 267 334 0.60 2 2 2.2e-22 1.2e-18 68.1 0.1 6 89 437 518 433 518 0.93
Sequence Information
- Coding Sequence
- ATGTTCTCTTCATCAGATGATGAAGATAAATTATTCCTAGGATTTGGAAAACTAGAATCAAAACCAACAAAATGTGTAAATCAACAAGAACCAAAACACACTCATGATTCTCCATCTTACGATTTATTATGTAAAGATATCGGAAGGCGTTTTGGTAAGGGCAAAGTAAATATGTCTAATGAGCAAATTGAACAGTGGTTACAAGACAGTGAGAATGCAGGACTTGGagttaaaaaggaaaatgatGCCATGTTAAAATTTGGCGAAAAATTCCCATCTGAACTTTCATTGGATACGACAAATATGCCTATTGATTTCTCTATTAAAAGAGATGTATCCAAAACTGAAGATGTGACCAAAGTGGATCTGAACAGCAGTGATGAGAAAATGTCACCTCACTTAGCTACCAAACCTCAGTTAAGTGAACGAAAAACTATATTTagaaaagagaagaaaagTACAACACCAAAAATTAATGCTTTTTCGGCAAATAATGAGAGTAGTGTTTATGCTTTTGAAGCTGATACTGAGGATTCTATTAGTACACCATTTAGAAGACCTAGTCGAAGGCCATCCAGCACAGCCACATCAAAATCTGAAGATGAACTTTGTAAAATAGATGATATTTCTAAAACCAcagtacaaTTCAGACCTCCACCTATGATAAAATCAGATGTTAAAGTATGCCggcaagaaattttaattagtgatgattcaaatagtaataatttagaCAACGAAGACGGTTCTAAATATGTtactaaaattgatttaagtCAAAAATCACCAACAAAACCTAAAGCTGCAGCTGAAAATTCAACTTCAATGTTTCCACCAGTTAATGCGAGTCAGAAACTTAAAGCTGATCACAAATTGCTATATAAAACTGTTGGAAGTAAAGGTTTTGACAAAATATCTGAAACATCTGaagaattcaaatataaagtaCCCAGTTCTCCAAGTGCTAGCTCTTCATCTAGTGCAAATATATACAAGCGACAGACAACAAAACCTAGAAGCCGTCCATTTGAATTTTGTGCTCCTATTAACGTTACTGACTTCCCAAATCAAGAATGTACAGCACAAATAGTAGAGGCACCCGTATTTCATCCTTCTGAAAAGGAATTTCAAGATCCTATtgaatatatagaaaaaattcgAAGCTGTGCTGAAAAGTTCGGTATTTGTAGAATAGTACCGCCATCGAGTTTTAAACCAGAATGCAAAGTTTCTGATGACATGAGATTCACTTCGTATAACCAATATGTTAACAAAATGTTACATCGGTGGGGGCCGAACTTTAAAGAGTTGATGGCAATCAAAAAGTATTTGCAAACACAGAGCATCACACTAAACCAGTCTCCATGGATTGGAGGAATGGAGATAGACTTGCCTAGATTATATCAAACTGTTCAAACATTAGGTGGTTTAAAAGAGgtaattgaaaagaaaaaatggcCAAAGGTTTCAGATGCAATGAAAATTCCAAAATTAGCACAAGATCGAGTTACTAAGCTGGATGATATTTACTGCAAATATCTACTTCCTTATGATACATTATCACCAGGAGAGAGGGAGAAATTATTTGATGAAGTTGAAACGGATTGGGCAAAACGTGAGTCACGAACTTTAATTAGGGCCCAGCAGAATttcgataaaaatgaatctagTCCACAAAATTCAGATGCTGAATCTGACGAAGAATCCGAGGAATGCATTGTAAAAGGCAGAAACATGGCTTTGAATGCGTTTTACAGAATTGCAAGAAATACAATGAGCATGTGGTTCAAAACATCTGAGCCTCCACCTCAAGAGgTTGAGCAAGAATTTTGGAAACATGTGACTGTGAAACAAAACCATATTTGTGTTCATTCTGGATCAATTGATTCTGGAAGTTGGGGATATGGCTTTGCTGTATCAAAGAACAGTCCATTTGCGCGTCACGCTTGGAATCTTAAAGTCTTAACAAACAATAGTGGATCTGTTCTAAGATCAATGGGACCAGTTATGGgaGTTACTGTACCCACATTACATGTCGGAATGGTATTTAGTGCATGTTGTTGGTACAGAGATCCCCATAGTCTTCCATGGATTGAATATTTACACACAGGTGGaagtaaaatttggtatgGTATACCAGATTCCAATAGCAAAACATTCCATTCGACATTATTGAAGTTGGTGCCAAATTATTGTCGAAATAAGTCTATTTGGCTACCGTCTGATACAGCGATGATTCCACCAAACCTCTTGGTAGAGAATGGGGTGTCACTTTGTAGAACTGTTCAAGAACCAGGGCAATATATTGTCATATTTCCAAAAGTGTTTACTTCTAGTGTTAGCACAGGATACGTTGTTTCTGAAAGTGTTTATATTGCTCCTCCTTGGTGGCTTCAAAATGCTCAAACTGTGTTTGATGAATTGAGAAATAATTGTGAACCTTCCATGTTTTCCTTTGATCGACTACTCATTAGTATTGCTTTGGATAATCGATCAAATGTTGAGGTTCTTAGGCAAATACAACCAGCTATTCAAAGCCTTTGTGAACGTGAGAAAAGTTCAAGGGAGAAAATACGTCAACTTGGAGTGgttgctacagaaaaattgccGTTGCCTGATGCACCAGGTGCAAGAAGACGAAAGAAATTGCAAGGAGGTGAAGGTGACTTTGAATGTGAAGTTTGCAGGACTAATTTGTTTGTGACCCTAgtaAACGAAACACAGTATGATCTAGTATATTGTGTTCGCCATGCCATTGAATATATCAAAGAGCAAAAGCTAgatgtaaaaatttgcaaattaatgtACACTTATGATGACCACGAACTCTGTGATTTGAAAGacaaactacaaaatttgatcaACACAAAAGTTCAAAAGAAAACACATAGTAAGTTTGCTGGAATGCCAACAATGTTAAAATGA
- Protein Sequence
- MFSSSDDEDKLFLGFGKLESKPTKCVNQQEPKHTHDSPSYDLLCKDIGRRFGKGKVNMSNEQIEQWLQDSENAGLGVKKENDAMLKFGEKFPSELSLDTTNMPIDFSIKRDVSKTEDVTKVDLNSSDEKMSPHLATKPQLSERKTIFRKEKKSTTPKINAFSANNESSVYAFEADTEDSISTPFRRPSRRPSSTATSKSEDELCKIDDISKTTVQFRPPPMIKSDVKVCRQEILISDDSNSNNLDNEDGSKYVTKIDLSQKSPTKPKAAAENSTSMFPPVNASQKLKADHKLLYKTVGSKGFDKISETSEEFKYKVPSSPSASSSSSANIYKRQTTKPRSRPFEFCAPINVTDFPNQECTAQIVEAPVFHPSEKEFQDPIEYIEKIRSCAEKFGICRIVPPSSFKPECKVSDDMRFTSYNQYVNKMLHRWGPNFKELMAIKKYLQTQSITLNQSPWIGGMEIDLPRLYQTVQTLGGLKEVIEKKKWPKVSDAMKIPKLAQDRVTKLDDIYCKYLLPYDTLSPGEREKLFDEVETDWAKRESRTLIRAQQNFDKNESSPQNSDAESDEESEECIVKGRNMALNAFYRIARNTMSMWFKTSEPPPQEVEQEFWKHVTVKQNHICVHSGSIDSGSWGYGFAVSKNSPFARHAWNLKVLTNNSGSVLRSMGPVMGVTVPTLHVGMVFSACCWYRDPHSLPWIEYLHTGGSKIWYGIPDSNSKTFHSTLLKLVPNYCRNKSIWLPSDTAMIPPNLLVENGVSLCRTVQEPGQYIVIFPKVFTSSVSTGYVVSESVYIAPPWWLQNAQTVFDELRNNCEPSMFSFDRLLISIALDNRSNVEVLRQIQPAIQSLCEREKSSREKIRQLGVVATEKLPLPDAPGARRRKKLQGGEGDFECEVCRTNLFVTLVNETQYDLVYCVRHAIEYIKEQKLDVKICKLMYTYDDHELCDLKDKLQNLINTKVQKKTHSKFAGMPTMLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -