Basic Information

Insect: Pyrrhosoma nymphula
Gene Symbol: Zfpm1
Assembly: GCA_963573305.1
Location: OY754335.1:81304856-81324767[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.4 2e+03 2.6 0.4 2 23 5 26 5 26 0.93

2 14 3.2e-05 0.027 17.9 0.4 1 23 1009 1032 1009 1032 0.95

3 14 0.0021 1.8 12.2 0.4 1 23 1037 1060 1037 1060 0.98

4 14 8.3e-06 0.007 19.8 3.8 2 23 1063 1084 1062 1084 0.97

5 14 2.4e-05 0.02 18.3 1.0 1 23 1090 1112 1090 1112 0.99

6 14 1.1e-05 0.0095 19.3 6.2 1 23 1118 1140 1118 1141 0.96

7 14 1.2 1e+03 3.5 2.4 5 23 1154 1172 1153 1172 0.97

8 14 0.0016 1.4 12.6 1.5 3 23 1179 1200 1178 1200 0.96

9 14 0.0088 7.4 10.2 0.2 2 23 1216 1236 1215 1236 0.97

10 14 3.7e-05 0.032 17.7 0.1 1 20 1242 1261 1242 1264 0.94

11 14 0.012 10 9.8 1.1 1 23 1272 1294 1272 1294 0.99

12 14 0.0051 4.3 11.0 4.4 1 23 1300 1322 1300 1322 0.97

13 14 1.8e-05 0.016 18.7 4.6 1 23 1328 1350 1328 1350 0.98

14 14 7.7e-06 0.0065 19.9 2.2 1 23 1356 1378 1356 1379 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.4	2e+03	2.6	0.4	2	23	5	26	5	26	0.93
2	14	3.2e-05	0.027	17.9	0.4	1	23	1009	1032	1009	1032	0.95
3	14	0.0021	1.8	12.2	0.4	1	23	1037	1060	1037	1060	0.98
4	14	8.3e-06	0.007	19.8	3.8	2	23	1063	1084	1062	1084	0.97
5	14	2.4e-05	0.02	18.3	1.0	1	23	1090	1112	1090	1112	0.99
6	14	1.1e-05	0.0095	19.3	6.2	1	23	1118	1140	1118	1141	0.96
7	14	1.2	1e+03	3.5	2.4	5	23	1154	1172	1153	1172	0.97
8	14	0.0016	1.4	12.6	1.5	3	23	1179	1200	1178	1200	0.96
9	14	0.0088	7.4	10.2	0.2	2	23	1216	1236	1215	1236	0.97
10	14	3.7e-05	0.032	17.7	0.1	1	20	1242	1261	1242	1264	0.94
11	14	0.012	10	9.8	1.1	1	23	1272	1294	1272	1294	0.99
12	14	0.0051	4.3	11.0	4.4	1	23	1300	1322	1300	1322	0.97
13	14	1.8e-05	0.016	18.7	4.6	1	23	1328	1350	1328	1350	0.98
14	14	7.7e-06	0.0065	19.9	2.2	1	23	1356	1378	1356	1379	0.96

Sequence Information

Coding Sequence: ATGGATCCTAATGTGTGTCCAGTTTGCACGCTCTATCTTCGGGAGGGCATCACGCTACACAATCACCTAAATACTCACCCGAAGGACCAAGTCATTGAAGCATTGGTGAGGTGTGCATCTCTTGGAGTTCCCGGTTCTGCCAGGAACGAGGCAAATGAAAGTGTTCAAGATCCCATTACTGCCACTCAGCCCAGTATTGAGAATTCTACGACACCTGTTCATCACTTTGCGAGCCCAGTACAGACTCTTACATCTGTGCCATCATCAGGATCTGTGTCTGTCTCTAGTCCTTATGGAATCACTAGCTCAATTTCCTTGCCCAACACCATTCCTTCTCATAATGCCATCACTGCTCCAAACAATAATTCCACTCCGATGTCACCTTTGCAGCCATTTACACTAGGTTTGGGCAGTTCTGGCAATCAATATGCCAGTACTTTTGCCTATCAACAGTTCTGTGGTGGGGGGGATGGAACGTTTGGAAGCGGCCCTCTGTTGCTGGCAATGAGCCCACAACAGCAGTATGCGGCATATAGCAGCAGCAGTAGCAGCAGTAGTAATTCAGTTCTTCAAATGGTCTTCAATCCTTATTCTTTAGACCAAGTGATTGGAAGTCAAACGTATCCCACCTCTGGGTTAATAGCAGGCATTGGCATTGGACCTACTTTGCAAACATGTCAACAGGTCCAAACAAATGTGCTTCAGCAGGTTGTAACAGCATCACCCATCGTAACTGCACCAATACATCAAGTGCCAGCTGAGGAAAAAGATAGAGGGACAAATGAGAATGGCAATCAAATTCATGTGCCACCAGAAGTAATCACTGATGAAGTGCAGGAACAGATTGAACAGACTCAAACAGACAGAACAGCTGGCCTGGACTTATCACACCACACTCGTGACATGGTAGTTCTTCAAAATACGTCCCCATCATCTAGCAGTCAGTTGGCCCTGAAGAATGGCCCTCTTCCTCCAGAAGTGGGTTCACCCCATCAACGAACCAGCCGACGGGGAAGGCATAGGACAAAGTCCACCTCCAAGAGCCCAGGTTCCAAATGCCATCATAGTCACAGCAGTACAAATAGAAATATTATTCCCTCTCTGCCCGGTACCACATTAATACCACTAGGAAATGACAAAGCAGGGCCGAAAAGGATGCTAAACAAAATGCACAGCCCGAAGCACTACAGTATCTTGGAGCAAGTTAACACAGTTTTTGAAGAGAACAATGGGGTTATCGATGGAATATTTGGGGGTAGTTCACACCATCCTGAAAAATCAATCtatgaaaaacagaaaaagcATTACTCATCAAAACTACATGAGAATATCGAAGTGGTTGAAAATTGTGCTGAAGCATCACACAATGAGCAGTCCAAAAGGCTTGTGCTTAGTCCCGTGAATGAAGTTGTCGATGCAGTGAAGGATGGAGACGATTGGGTCGAGCTCTCCCTCTTCCCTCAAAATGGAGTTCCAACAGTAACGGACCAAGGTGTTGTGAGTGCTGTGCAGGAAGCAGATCACGATGATCAAgatgatgaccacttccagtcggATGCTTGTTTTGTGACCGAAGATGTGGGGAACTCAGAGGATCCTCTGAAAAAtggtgataataaaaataatgaggataTGGAGATAATTGTCCTTAATCAGTGGAATTCTGCGGTGGAGAAGGACAACACTCAAAATGCAGCAATAGAGAGAAATGAGGTTGAAGTTATTGTGGAAAGCAGAGATGCTAATAGTGGAAAAGAGGATGGCAAGGAAGATGGAACTGGAGAGTACTGCGAAGAACAGAAGGGATACGAGAACAATGAAGTACAGAGCACAGAGTGCTGGGTTCCAACGCCAGAGGTCATTGCTACGACTGAAGAGGTCAAGGAGCCAAATTTTGAGGAACAATCGTTGGTGGCAAATGACGATGGCTTGGTGGTGCATCACAGGGAGGATGCCACAATGGTATGTGACCAGGAGTGTAGGCCTTGTGGCTCGCATGATGGCAGGCCAAATCTGCAAGAGTGCCGGCCTGTAGCACCAGTGGATGGATGTTTGGAGGGGAATATAAACGTCCATTCTGGAGGCACTAGCATTCATCCTGCCCCAGGTGACACCGAGGATGCACTTCCTGCCCCACCAAGCCCTGTGAACATCTTTCAGATCGATGGCATGAACATCATTCTCTCCTCGCGGCTGATTGAGCAGACAGACAAGATGAGGGAGAGGTTGGGCATATTTGAAGGTTTGGGGCCAATGGCTGGCAGCTATGGAGACATCTCCATTCCGGAGGGAATACTGGAGGAAGAGGGTCTTGTAGTGTCTGATATAATAGCTGATGAGGCTATGCCCCCAAGGGGTGAACTTTCTGGACAGGAGGGCATGGGTAGTGGAAGCAATTGTAGTGAGGGTGGTCCCATTGAAGACCCACTGCCCAAGACAGAGGGATCCACTGTTTGGACATCTGGAGGATTTTCACTTTTCCCTGCTTCTGCCCGTCAAGGTGGAGCACAGTGTGATCTTCTGCCTGGAGGTGAAGCTTGGTCGCCAGTCGAGGGGTTTAAGGCAAGACAAGAACCTGCCGTTCCTTCAGTGACCCCAGAAACAGTGCCAAAGAAGAAGCCTCGTGCCAAGAAGAGTACGGCCGCTGGGGGTGCTTCAAAGGCTGTAACAGACTCTGCAACAAAGACAAAGACCAAGCGACTTTATCATTGCTGGACTTGCTTGGAGGTGTTCAACTGTCCTAAGGAGAGGAGGGTGCACCAACGTGAGAAGCATGGTGGAGAGAAGGCACTGGGTGCAGCGACTCCGGCCGATGGCTCTCTTATACCCCCCTCCCAAGGCGATGAACAGCAGCCAAGCTTGGGCCCAGCCACTGAAGTGGGTGGAAAGGTGGTCAAGTCAGAAGTGAGGGAGGCCAAGGTGGAGCCAGGGGACCCTACGGAAGTTGATGTAAAGGATCCCAAGGTGTCCACTGAAATTGAGAATGCAAAGGAATTGGGCACTGCCACTGCTGCCAAGTTGTCTCACCCCTGTTCAGATTGTGACCGCTCATTTCCCTCAATACGATCTCTCACTGCTCACCGCAGAGCTGCTCACAGAGACTCACGATTCAAGTGTCCCACTTGCGCTGAGAAGTTCCTCACATCTGCAGATTTCACCAACCACGTTAGAACCATTCACCCGCTGGAGTGTTCTATGTGCGGCAAGCAGTTCTGCCGGCAGCAGAACCTTCGGCTTCACCTCAAACGGCACCTGAGTGTTCGCCCGTACAAATGCACACAGTGCGACAAGGCTTTTGTCACAAATCAGAAGATGGAGGAGCACCTTAATTCCCACACAGGCCGCACCCCCTACCAGTGCCCCCTCTGCCCCAGAGCTTTCCGCAGACACAGCAATCTTATTCAGCACCGCAAGCACCACCACTTGAAAGTCAAGCGCAAGGTTCGAGACTTCTTCTGCCACTGTGGGGCAGTGTTCCATTCTGTCAAGAAGCTGGAGTGGCACAAGGAGACGCATGAGGACAAGCCCAAAGCGTGTCCACACTGCAGCGATCGGTTTGTGCACCGGGCCGGCCTCACGAGGCACATAAGGCAGGCGCACGACCGGCGTTACGTCCCATTGGGAGCGAAGGAGGACGTCAACGTGGAGTGCCCCGTGTGTTCGGCCGTCTACCTCAAGTCCTCCCTCCACATCCACATGAGGGTCCACTCAGGTGAGCGCCCATTTTCCTGCGGCATCTGTGGGAAGGGCTTCGCCACCAAGTGGAACCTCCAGCTGCACCGCTGGGTGCACGCCAGTCCCCACTCAAAGCCCTTCAAATGCGCCACGTGCAAGGCTGCTTACCACCGGCGGGTTGACTTCGTTGCCCATGTCCGTTCCCACAGGAAGGTGCGGCCGTACGTCTGCAACACGTGCGGCCGACGTTTCATGCGAAAGTACAACTGCGTGCGACACTCTCGTGAGCACGAGGCGGGGAAGGCGTTTGAGTGCACAATCTGTCAGAAGCGTTTCCATCGGCGATATTACCTGAAGGAGCACCTTAGGATCCATACTGGCCTGAGACCATATGTGTGCCATGTGTGTGGGAAGGCATCTGGTACTAAATCCAACATGAATAAACATGTTCGCATTCACCATGCGAGGGAACCCGTCAACACTGAAGGCTAA
Protein Sequence: MDPNVCPVCTLYLREGITLHNHLNTHPKDQVIEALVRCASLGVPGSARNEANESVQDPITATQPSIENSTTPVHHFASPVQTLTSVPSSGSVSVSSPYGITSSISLPNTIPSHNAITAPNNNSTPMSPLQPFTLGLGSSGNQYASTFAYQQFCGGGDGTFGSGPLLLAMSPQQQYAAYSSSSSSSSNSVLQMVFNPYSLDQVIGSQTYPTSGLIAGIGIGPTLQTCQQVQTNVLQQVVTASPIVTAPIHQVPAEEKDRGTNENGNQIHVPPEVITDEVQEQIEQTQTDRTAGLDLSHHTRDMVVLQNTSPSSSSQLALKNGPLPPEVGSPHQRTSRRGRHRTKSTSKSPGSKCHHSHSSTNRNIIPSLPGTTLIPLGNDKAGPKRMLNKMHSPKHYSILEQVNTVFEENNGVIDGIFGGSSHHPEKSIYEKQKKHYSSKLHENIEVVENCAEASHNEQSKRLVLSPVNEVVDAVKDGDDWVELSLFPQNGVPTVTDQGVVSAVQEADHDDQDDDHFQSDACFVTEDVGNSEDPLKNGDNKNNEDMEIIVLNQWNSAVEKDNTQNAAIERNEVEVIVESRDANSGKEDGKEDGTGEYCEEQKGYENNEVQSTECWVPTPEVIATTEEVKEPNFEEQSLVANDDGLVVHHREDATMVCDQECRPCGSHDGRPNLQECRPVAPVDGCLEGNINVHSGGTSIHPAPGDTEDALPAPPSPVNIFQIDGMNIILSSRLIEQTDKMRERLGIFEGLGPMAGSYGDISIPEGILEEEGLVVSDIIADEAMPPRGELSGQEGMGSGSNCSEGGPIEDPLPKTEGSTVWTSGGFSLFPASARQGGAQCDLLPGGEAWSPVEGFKARQEPAVPSVTPETVPKKKPRAKKSTAAGGASKAVTDSATKTKTKRLYHCWTCLEVFNCPKERRVHQREKHGGEKALGAATPADGSLIPPSQGDEQQPSLGPATEVGGKVVKSEVREAKVEPGDPTEVDVKDPKVSTEIENAKELGTATAAKLSHPCSDCDRSFPSIRSLTAHRRAAHRDSRFKCPTCAEKFLTSADFTNHVRTIHPLECSMCGKQFCRQQNLRLHLKRHLSVRPYKCTQCDKAFVTNQKMEEHLNSHTGRTPYQCPLCPRAFRRHSNLIQHRKHHHLKVKRKVRDFFCHCGAVFHSVKKLEWHKETHEDKPKACPHCSDRFVHRAGLTRHIRQAHDRRYVPLGAKEDVNVECPVCSAVYLKSSLHIHMRVHSGERPFSCGICGKGFATKWNLQLHRWVHASPHSKPFKCATCKAAYHRRVDFVAHVRSHRKVRPYVCNTCGRRFMRKYNCVRHSREHEAGKAFECTICQKRFHRRYYLKEHLRIHTGLRPYVCHVCGKASGTKSNMNKHVRIHHAREPVNTEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00307104;
90% Identity: iTF_00307104;
80% Identity: -