Basic Information

Insect: Pyrrhosoma nymphula
Gene Symbol: ZNF236
Assembly: GCA_963573305.1
Location: OY754340.1:39855256-39915141[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 6.8e-06 0.0058 20.0 0.3 3 23 193 213 191 213 0.96

2 16 10 8.5e+03 0.6 0.1 2 14 220 232 220 233 0.85

3 16 0.00011 0.091 16.2 0.1 2 23 308 329 307 329 0.96

4 16 0.00082 0.69 13.5 0.5 3 23 337 357 335 357 0.96

5 16 0.00051 0.43 14.1 2.8 1 23 423 445 423 445 0.97

6 16 0.00011 0.091 16.3 2.8 1 23 468 490 468 490 0.98

7 16 1.7e-06 0.0015 21.9 0.5 1 23 496 518 496 518 0.98

8 16 3.4e-05 0.029 17.8 0.3 1 23 524 547 524 547 0.97

9 16 0.0014 1.2 12.7 2.6 1 23 557 580 557 580 0.96

10 16 1.2e-07 0.0001 25.6 1.4 1 23 780 802 780 802 0.98

11 16 2.2e-05 0.019 18.4 0.8 1 23 808 830 808 830 0.99

12 16 9.5e-08 8.1e-05 25.9 1.0 1 23 836 858 836 858 0.98

13 16 0.0035 2.9 11.5 3.0 1 23 864 886 864 886 0.97

14 16 0.00023 0.19 15.2 5.9 1 23 1011 1033 1011 1033 0.98

15 16 0.00026 0.22 15.0 0.4 3 23 1041 1061 1039 1061 0.98

16 16 7.1e-05 0.06 16.8 0.3 1 23 1072 1095 1072 1095 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	6.8e-06	0.0058	20.0	0.3	3	23	193	213	191	213	0.96
2	16	10	8.5e+03	0.6	0.1	2	14	220	232	220	233	0.85
3	16	0.00011	0.091	16.2	0.1	2	23	308	329	307	329	0.96
4	16	0.00082	0.69	13.5	0.5	3	23	337	357	335	357	0.96
5	16	0.00051	0.43	14.1	2.8	1	23	423	445	423	445	0.97
6	16	0.00011	0.091	16.3	2.8	1	23	468	490	468	490	0.98
7	16	1.7e-06	0.0015	21.9	0.5	1	23	496	518	496	518	0.98
8	16	3.4e-05	0.029	17.8	0.3	1	23	524	547	524	547	0.97
9	16	0.0014	1.2	12.7	2.6	1	23	557	580	557	580	0.96
10	16	1.2e-07	0.0001	25.6	1.4	1	23	780	802	780	802	0.98
11	16	2.2e-05	0.019	18.4	0.8	1	23	808	830	808	830	0.99
12	16	9.5e-08	8.1e-05	25.9	1.0	1	23	836	858	836	858	0.98
13	16	0.0035	2.9	11.5	3.0	1	23	864	886	864	886	0.97
14	16	0.00023	0.19	15.2	5.9	1	23	1011	1033	1011	1033	0.98
15	16	0.00026	0.22	15.0	0.4	3	23	1041	1061	1039	1061	0.98
16	16	7.1e-05	0.06	16.8	0.3	1	23	1072	1095	1072	1095	0.96

Sequence Information

Coding Sequence: ATGGGTGCGGAAGGGCAGCAGTCGTTTGTCTTTTCCTCCGAGGGAGGCACGACCACCTTGCTCTCCCTCCCCTTCGCGCTGCTCCACGACTCGGGACTCGCCACCATATCCAACAATGGCGGTGCCCCACGCCAGCCGGCAGGAGCTACCAACACGACCAACATCATCATCAAGCAGTCTACAGCATCGTCGCATACAAGCCTGCCAACCAACACGATATTCCTGGATGCCGCTCAGATGGCACTGCTGTCATCGGGAGCAGGACAGGTGGTCCTCACGGACTCGTTCCTCGAGGATGGGCAAGGTGGCCCGGAGACACAACAAATATTCCTGCAAGTGACGAGCGATTCGCTGGCCGAAGAGCAAGTTGTAACTCAGAAAGATGGGGGTGAATCGGTCATCTTGGGTCAACAGCCGGGGAACCAAGTCTCCTTGCACGGCATCCGTCAGGGCAATGCCGGCGCCGCTGCCTTGCTGGAGAGAAGGCCGGTCGTGACGAAGGCCAAACGAGGTCCTGGGAGGCCAAGGAGGGACGACTCGAAGATGATGCCGCCCTCGGTGAAGGGTGTGTGGTTTTGCCAGATCTGTGGGAAGGAGTTCAGCAAGTGGCCGCTCTTGAAGAAACACCTCAAGGCTCACACGGATGACAAGCCAAACCGGTGTTCACAGTGCTCAGCGTCTTTTAATGTCCCTTCGCTACACACGTTCCGACCAAACCACCCAAATGTCGGGACCAACTACGTTGGAGCTGACGGTTGGAGGGTGTGTAGGCCTGTCGCCCGACGAAAACAGTCGGATCCGACGGTCGGGCGGTTGGTCCTAACAGACCATCCAACAGCCGACCGCCCTACCCCGATTTCTTGGAACCTAAAGCTGCATGAGGCGACACATGTCAGTCCAGAAGCATCGGGAAATCCCCTCCGCTGTCCGGCTTGCAGCCGGACATTCTCGAGAATAGCATCGCTCAAGGCTCACATTATGCTCCACGAGGAGGATGAGTCACTGTTTTGCTCGCAGTGTAGTGAGGAGTTCAGTACGCAGAACCAGCTCGACGAGCACCTGAAGATCCACGAGGTTGAGTCGAACAACCTGGATCCCTTGTCCATGGAGCAGGGGTCCATGGCGCTGGAGGAGGGTGGCATGTGGGTGCCGGACGGTCACGGCAACAACTTTGGTGACGAGGTGCACTCGTTTGGTCCGGCCGAGCAGACGGGCGGAGGGCAGAGTGGGGCGATGATCGAGGCGATACAGAAGGCGGCTGGTGCGCATAGGTGCCGCCTCTGCAATGCCTTCTTCCGCAAGGCCTCCCTGCTGCGGGATCACATGAAGGAGCACTCCAAGGTTAAGGCCTCCCTCCTGAGACGAAACCACAAGCGAAACATTGACCGGTCGTCTTTCTTGCACAAGTGCAAGAACTGCATGAAGGGGTTCCAGAAGCCGAGTCAGCTGGTTCGGCACATGCGCATACACACCGGAGAGAGACCGTACGAGTGCCTGCAGTGTGGCCGTGCTTTCAACCAGAAGGGCTCCCTCCAGATCCACATGACGAAGCACTCTGGAGTCAAACCATTCACGTGTGAATTCTGCTCGGCTGGATTCAGGCAGAGAGGCAATCTAAGGGCGCACATCCTGAGGGTGCACACAATCCCCGTGAGTGGTGAGCAGGCATTCCGCTGCTGCGAGTGCCCCTGTGTGTTCCGCAAGCTTGGCTCGCTCAACGCCCACGTCAGCCGTGTGCACGGGCATGGGCACGACACGACATCTGTGGCCAACGGCACGCCGCGCAAACGGAAGAAGACTGACGGCAGTGGCATGGGTGACTCGCTGGATGAGGACGTCTCGGATGTGTTGAGGGACCTTGCAGAGCTGGAAGAGGCCACGAGGGGCCTCGGTGGAGGTGGGGAGGGTGGCGGGGGTCTTGGAGTCGGCAACCGGAATGTGCCGCATGCCGAAGTGGGGCAGGGTGGGACAGGGGGAGATGCCTTGGGGGGCAAGAGGATGCCGGGGGAGGCCTTGATGGACGTCGTCCACCCATCGGACATCCTGCAGCAGGCGCTGGAGAAGAGTGGACTCTctggggaggggaagaaggggagcGTGGCGGCAGGTGAAGTGGGAGTATCTTCCAGCCTGGATGACAGTGCAGTGCAGAGAAATGAGGGCAGTTCAGTTGCAAGAAGAGAAGGTGCCGGAGTGTCGCATATGGTCGCCAATGCCGTTCCCGATAATAACAATGCCAATTCGCAGTCCTGCGTTTTGACGCTGGCTGATAAGGCGCATGATGGAACTGTGAGACGGTACAGCATCAAGGTCCGGTGTTTGGCAGGGGTGAGGTGGCACCAGTGCACGTACTGTCCCAAGGAGTTCAAGAAACCCTCGGACCTTGTTCGGCACATTCGTATCCACACCCACGAGAAGCCGTACaagTGCTACATGTGCTTCCGTGCATTTGCAGTCAAGTCCACGCTAACCGTTCACTTGAGGATACACTCGGGCCTCAAGTCGTATGAATGTCCGACCTGCAACAAAAAGTTTGCGTCGCAGTCATCGCTCAAGGTGCACCAAAGGTTACACTCAGGATTGAAGCCATTTGCGTGTCCATACTGCAGCCTACGCTTCCGCACGACTGGCCACCGAAAAACCCACGTCTCAACGCACTTCCGAGTCCGCTCGCGCCTCTCCAAGAAGGTGAAGAGGGATGGAGTAGGAGGGGGTGGCGGTGTGTCGTCGGGAGGGCGGGTGGGCCAGGACGTGACGACGGCCATCCAGAGGGTGTTCCTGCGAGACCCAATCATCGTGCAGCAgcctgaggaggaagaggaggaagatgttGGCGGGGAGGATGAAAACGGGCCAAACAGTGAAGCAAGGATTAAAGATGAGAGGGAACCATCGCAGGAAGAGGATGATGTAATGGGGAAGCCGTCTGTGCCgaacgaggaagaagaagatggtgGTCATGGGGAGCCGGGTGGTGGGGAAGTGCCGAGGGTAACCGGTACGCAGATGACCGTGGTTGAGAACCGGCCCCACGTTTGCAACCAGTGTCACGCAGCGTTCAAGAAAGTCTCCCACCTGAAGCAGCACATTCGATCGCACACCGGAGAGAAACCATTTGGCTGCACGTCTTGCAACAAGGCCTTTGTGTCGAGGGGCGTTCTGAGGGCTCACTTGAAGACTCACGTCCCAATCATGGCGCCGTCCAGACGTCCTTTTGAGTGCAGCGAGTGCTCAAGGAAGTTTGTTGCTGCGGGTAGCCTCAAGAGGCACATGATCAACTCTCATGAGAATCTCCGAAAGAggggggagaggggtgtcGCACAGCCGCAGGACCAACAGCAACCGCAAGGTGCGGTGGAGGCGCAAGGGGAGGAGGATCAGATGATGGTCGTGGAGGCGGACGAACCCAGTGACGAGGAGGAAATGCAAGGCGAGGAGGAGACGCAAGGGACTTGCCTCGTGGTGGATGGCGCGCACCATGCGTCCCAGCTGGAGCTCGGGGATCATGATATTCATGAAGGGACGCAGCTGGCCGTGATATCGGAGGACCACAACGAGGTGGACGGACTCAAAGTCAGAGCCGAGGAGGTGATGGGAGGGCAAGAGACGGAGAACGTGGTGGTCACCTTCTCACTCGACTTCCCAACAACGCATGCCTTGGGCAACCAGGTCATCAACCACCAAGGTGAGACGGGTCGATTAACATTCGTCACGTTCAGCAGGCTGGTGCTTATTTTACCACGCTCATTTTAG
Protein Sequence: MGAEGQQSFVFSSEGGTTTLLSLPFALLHDSGLATISNNGGAPRQPAGATNTTNIIIKQSTASSHTSLPTNTIFLDAAQMALLSSGAGQVVLTDSFLEDGQGGPETQQIFLQVTSDSLAEEQVVTQKDGGESVILGQQPGNQVSLHGIRQGNAGAAALLERRPVVTKAKRGPGRPRRDDSKMMPPSVKGVWFCQICGKEFSKWPLLKKHLKAHTDDKPNRCSQCSASFNVPSLHTFRPNHPNVGTNYVGADGWRVCRPVARRKQSDPTVGRLVLTDHPTADRPTPISWNLKLHEATHVSPEASGNPLRCPACSRTFSRIASLKAHIMLHEEDESLFCSQCSEEFSTQNQLDEHLKIHEVESNNLDPLSMEQGSMALEEGGMWVPDGHGNNFGDEVHSFGPAEQTGGGQSGAMIEAIQKAAGAHRCRLCNAFFRKASLLRDHMKEHSKVKASLLRRNHKRNIDRSSFLHKCKNCMKGFQKPSQLVRHMRIHTGERPYECLQCGRAFNQKGSLQIHMTKHSGVKPFTCEFCSAGFRQRGNLRAHILRVHTIPVSGEQAFRCCECPCVFRKLGSLNAHVSRVHGHGHDTTSVANGTPRKRKKTDGSGMGDSLDEDVSDVLRDLAELEEATRGLGGGGEGGGGLGVGNRNVPHAEVGQGGTGGDALGGKRMPGEALMDVVHPSDILQQALEKSGLSGEGKKGSVAAGEVGVSSSLDDSAVQRNEGSSVARREGAGVSHMVANAVPDNNNANSQSCVLTLADKAHDGTVRRYSIKVRCLAGVRWHQCTYCPKEFKKPSDLVRHIRIHTHEKPYKCYMCFRAFAVKSTLTVHLRIHSGLKSYECPTCNKKFASQSSLKVHQRLHSGLKPFACPYCSLRFRTTGHRKTHVSTHFRVRSRLSKKVKRDGVGGGGGVSSGGRVGQDVTTAIQRVFLRDPIIVQQPEEEEEEDVGGEDENGPNSEARIKDEREPSQEEDDVMGKPSVPNEEEEDGGHGEPGGGEVPRVTGTQMTVVENRPHVCNQCHAAFKKVSHLKQHIRSHTGEKPFGCTSCNKAFVSRGVLRAHLKTHVPIMAPSRRPFECSECSRKFVAAGSLKRHMINSHENLRKRGERGVAQPQDQQQPQGAVEAQGEEDQMMVVEADEPSDEEEMQGEEETQGTCLVVDGAHHASQLELGDHDIHEGTQLAVISEDHNEVDGLKVRAEEVMGGQETENVVVTFSLDFPTTHALGNQVINHQGETGRLTFVTFSRLVLILPRSF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -