Pnym042795.1
Basic Information
- Insect
- Pyrrhosoma nymphula
- Gene Symbol
- DNAJC1_1
- Assembly
- GCA_963573305.1
- Location
- OY754329.1:115110872-115123876[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.3 1.3e+05 -3.8 0.3 7 18 25 36 24 37 0.85 2 4 4.4 6.3e+04 -2.8 0.0 14 24 101 112 100 113 0.86 3 4 2.1e-05 0.31 14.2 0.0 2 34 300 335 299 339 0.86 4 4 1.7e-06 0.025 17.7 0.0 3 33 430 464 428 469 0.86
Sequence Information
- Coding Sequence
- ATGGAGTATTATTCGTTGTTGTTGAAGCTAGCGTTGGCTTCTTCGATGTTTAAAATGGTGGTGTGTTGGGACAGCGAGGATTTGGAAATATTCGATCTTGTTGAAGaaattaacataaatttttatcAACTGCTGCAAGTGCCAGAGGATTCCAATGCTACAGATATTAAGAAAGCATTTAGAAAGCTCTCACTTGTTGTTCACCCTGACAAAAATGATGCTCCTGATGCCGACATTCAATTTAGACAGCTGGCAGCAGTGTATGAAGTTTTGAAAGATAATAACAAAAGAGCCAAGTACGATCTAGTCCTGAAAAATGGCCTACCTGATTGGCATGAGGCTGTGTACTATTATCGTCGTGTGCGAAAGATGGGCCTCCTGGAGATGATGGTCATCCTTTTTGTGATTGTCACCCTAGGCCAATATATAGTGTCTTGGGCTGCATACTTGGAAAAGAAATATGTTGCGGAGCAGTTCATGAACTCTAAGGCAAAGAAGATACAAAAGAAGCAGAAGAAAGCAAAACCAGAGGCGGTTGTTTCAACGGAACCAGTGATAGAAATCCCTCCTCCTAGTGTGTATGACATCTTGCCAGTGCAAATTGTTCGTTTACTGTGGTTCTGTATCCGAACCTTGCCCTCCTGCTACGGAATGGCTCGAAACTATTGGGAGGAGTGGCGGCGATGGTTTGATGATGAAGATTTGCTGGATGACGATGAAGAGGAAGATGACACTGGGGTGAAGAAGAGGGTCAGGCGAAGGAAAGTTTTTGAACTCCCAGAGATGACCGAGGATGATGGGGCAGGAATGGTGAATGAGAACGAGGAAAGTTTTGATAATTGCACTGAGGACTCTTCTGTGAAATCTGCAAACTCGAAAACAGCACCTGTTTCTGGAGGCCTTTGGACGGATGATGACTTGACTGAGCTTGTGAAGCAAATCAAGAGGTATCCTCCAGGCACGTTGGACCGGTGGGAGAAGATTGCTGATGCCATGAACCGTTCTGTCCCAGAAGTCACTTTCATGGCTAGAAAGGTGAAAGAAGAAGGTTACCGGGTGAATGCTGTGTCGACCATAGCCCCCACTTCTGTGGATGGGAGTGCTGAGGGCGAGGAGTGGCAGCTAGAAAAACCTAGGAAGGTGAAGACTAAGGGTGGCAAACTAGGAAAAACTCAGGAGACACTAAGTGATGGCCAGGTGAAGGAAGGCTCAGCTGCAGATGAGGACGTGGGGAAAAGTTCCAGTTCTCCTGTGGTTGTCACGAACAGTATACCCACTCCTGAAGTTGTGTGGTCTCAAGTTGAGCAGAAAGCTCTGGAAAATGCCTTACTCAGGTATCCAAAAGGGACACTTGAGCGGTGGGACAAGATATCAAAATGCGTTCCTGGAAAGGGAAAGGTGTGTTGCTAA
- Protein Sequence
- MEYYSLLLKLALASSMFKMVVCWDSEDLEIFDLVEEININFYQLLQVPEDSNATDIKKAFRKLSLVVHPDKNDAPDADIQFRQLAAVYEVLKDNNKRAKYDLVLKNGLPDWHEAVYYYRRVRKMGLLEMMVILFVIVTLGQYIVSWAAYLEKKYVAEQFMNSKAKKIQKKQKKAKPEAVVSTEPVIEIPPPSVYDILPVQIVRLLWFCIRTLPSCYGMARNYWEEWRRWFDDEDLLDDDEEEDDTGVKKRVRRRKVFELPEMTEDDGAGMVNENEESFDNCTEDSSVKSANSKTAPVSGGLWTDDDLTELVKQIKRYPPGTLDRWEKIADAMNRSVPEVTFMARKVKEEGYRVNAVSTIAPTSVDGSAEGEEWQLEKPRKVKTKGGKLGKTQETLSDGQVKEGSAADEDVGKSSSSPVVVTNSIPTPEVVWSQVEQKALENALLRYPKGTLERWDKISKCVPGKGKVCC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00261256;
- 90% Identity
- -
- 80% Identity
- -