Pnym021334.2
Basic Information
- Insect
- Pyrrhosoma nymphula
- Gene Symbol
- RCOR3_1
- Assembly
- GCA_963573305.1
- Location
- OY754328.1:18809046-18817117[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.63 9.2e+03 -0.1 0.0 30 46 20 36 18 36 0.88 2 2 1.8e-13 2.7e-09 40.0 0.0 3 46 217 260 216 260 0.98
Sequence Information
- Coding Sequence
- ATGGCCAGCCAAAGCCACCTTGGGCAGCCTGGTCACACGCAGTCTCCGCATCGCGGGCTCCCAGATAAATCAATTGCGAGTTTGGTGAAGTACTACTACTCATGGAAGAAAACTCGCAGCAGAACTAGTCTTATGGACAGGCAAGCTAGGAAGTTGGCAGCTCAACGAGAAGAAGGTAGCGAGGGTGGCTCTGAACTTGGCTCCAACACTGATTCGGATTCGGATGAAAAGAAGGAAGGCGAATCTAGCAAGAATTCCTGTGCAAATTGTGGTGTTGGATGTACTCATGTCCACCCTACTCCCAAAGGAAATATGTGCAATGCATGCTATCAGTATTTAAGgcgAACAGGTATGCTTCGTCCAACTACCGGTCCTGTGAAACGAGAGGGTCGTGACCGACATCACTTACTCATGAGGCATCGGAGGAAGCCTCCACGTGGTATGTACATCAATCATGATGACTTGGCTGCTATGGCAACTGGTCCTGCCGGTCAAGGAGAGGCAATGCTCAAGGCAATGGACCGTGAAATCGTCTCCTTGAAGCGACAAGTACAAAATCATAAGCAAACTATCAGTGCCCTAAAGCGGAAAACTGGTGAGGGCATTGATGACCTAAGACCACCAGATTCCAACAATCGTATCAATGCCAGGTGGACTAACGATGAACTTCTTTTAGCGGTACAAGGTGTTCGGAAATATGGCAAAGATTTTAGAGCTATTGCTGAAGTTATTGGTACGAAAACTGAGGCTCACTTACGGAGTTTCTTCGTTAACTATCGACGGCGGTATAATTTGGATGCTGTATTGAAGGAATATGAGGCAGAAAATGGACCTATTATGGATGACGAGAAAGAGGAAAAGATGGAAACAGATGGCCCATCATCGGGTAGTGAAGCCAGTACACCAACTCCTGGGGCAAGTTCTCCTGTTACGGTTAGCTCTCCTGGTTTAAACAAGCAGGCATTTTCCAAAGCACCCCTCCTGCAGTCCAGCCAAACAGCCAAATGA
- Protein Sequence
- MASQSHLGQPGHTQSPHRGLPDKSIASLVKYYYSWKKTRSRTSLMDRQARKLAAQREEGSEGGSELGSNTDSDSDEKKEGESSKNSCANCGVGCTHVHPTPKGNMCNACYQYLRRTGMLRPTTGPVKREGRDRHHLLMRHRRKPPRGMYINHDDLAAMATGPAGQGEAMLKAMDREIVSLKRQVQNHKQTISALKRKTGEGIDDLRPPDSNNRINARWTNDELLLAVQGVRKYGKDFRAIAEVIGTKTEAHLRSFFVNYRRRYNLDAVLKEYEAENGPIMDDEKEEKMETDGPSSGSEASTPTPGASSPVTVSSPGLNKQAFSKAPLLQSSQTAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -