Pnym052022.2
Basic Information
- Insect
- Pyrrhosoma nymphula
- Gene Symbol
- ct
- Assembly
- GCA_963573305.1
- Location
- OY754330.1:51182348-51190156[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.4e-32 2.2e-27 97.9 0.0 3 77 480 555 478 557 0.96 2 2 1.2e-31 4.9e-27 96.8 0.1 3 76 807 881 805 883 0.96
Sequence Information
- Coding Sequence
- ATGACCGTCCTTATGAGTCGATTTCGTCCTTATGAGTCGAGAAAAGACACAGCTGGTATTCCTGGCTTTGGATCAGCCCGCGGAGGTGTAGGTGGACTGGGAGAGGATAGCATGACTGAAGAGAGAATAGTTCACATCTTGAACGAAGCGAGCCACGCGATGAAGACAGCCTCGGCCTCACTCCACGGCGTCGTGTTGGGTGGCGTCGGTGGTGGTAACGGCGGTGGAGGCGGTCAAGAAGACAGCCGAAGCAACGATGACAGCAAATCCCCCCACCACGGACAGAGTTCTTCACCTCTTTTGTCCGGCTCCGGAAAGGATGGATCAAGCTCCCAAAACCGACGCCTCAAAAAGTACGAAAACGATGACATTCCCCAGGAGAAGGTCGTACGCATATATCAGGAGGAATTGGCGAAATTGATGGGCCGCAGGTTAGAAGATTCCATGCGCAGTCCCAGAGACCATCACTTCCCTAGTCTGCTCTTCCCGCACTTTTTCAGCGGCGCCGGCGGACCAGGCGGCAACGCCGGGAGCGGCGGAAGCACGGGCCACCCGCTGATGGACCGCACCCAGGAGGAGATCCGGTTGGCCCTCGACGCCTACCATCGGGAGCTCGTCAAGTTGAACGTGGCCCCGCCACCCCCATCGTCCCCGTCCTCCATCCCGGGCGGAGCCCCGGGACTCCCGCACCCTCCGCCGCCCTCGTCCGTACCCTCGCCCGCATCGTCGTCCGCCGCAATGGCCACCACGACCAACTCCATCGTGACGCAGGCCGGCCTCCTGGCCCTCCACCAGCAACACCAGCAGAACATGCAGGGCCATAACGGCATGGCGCAGGATCTCTCCCTTCCCAAGATACCCAACGGTGGCCTCGAAGGCCCGGGTGGCATGGGATTGGTGAAGAAGGAGGTGCTTGGGCCTGTCGAGCATCACCAGTTGCAGCAGCAACAGCACCACCAGCAGCAACAACAGCAACAGCACCAGCACCAgcaacagcagcaacaacagcagATGCAGCAGCACTTGCAACAACAGGCGGCGGCAAACGAAGCCCTGAGACATGCAGGGAGTGCTTTCTCGCTCGTCAGACCAAAAACTGAGCCAGGCCTACCTGGTTCAGGATCTCAATCAGCAGGTGGTGGTCAGCCAGGACAAGGGGCATGTGGATCCACACCAGGGGCTAGTCCTCATGGAGGTGGTGTCCCACCATCGCCTGCTCCTCCCACACCTTCTTCACTTTTGGTTGGTGTGGGTTCTGACGACTTTGGACCATCCTCCTTAGCATCAACTGGTGCTAGTCCCCTGCAACGCATGGCCTCTATCACTAATGCTCTCATATCAGCTCCAGTAGTTCCCAGCCATGTGCATGGCAGTCCGTCCCAAAGACCACTCAAGGCAGTGCTCCCCCCAATAACCCAGCAGCAATTTGATCAGTTCAACAACCTCAACACGGAGGATATTGTCAAAAAGGTGAAGGAACAACTTAGCCAGTACTCAATAAGCCAGAGACTATTTGGAGAATCAGTTTTGGGCCTTTCCCAAGGTTCAGTGTCTGATCTCTTAGCTAGACCAAAGCCATGGCATATGCTGACACAGAAAGGCCGTGAACCATTTATCCGAATGAAGATGTTTTTGGAAGATGATAATGCTGTGCACAAGCTAGTTGCAAGCCAGTACAAGATTGCACCAGAGAAGTTGATGAGGACTGGTGGATACGGTGGAAGTCCTCTAGGCCCGACCAAGCCCCTGTCAAAGCTGTCGGCTGCAATGCCTCCATCTGGTATGGATCCAGTTTCTAAGGCCATGGATGCTGTTGTGTCATCTTCACCCTCCTCCTCAGCTGTTCTCTCGGCTGTGGTTGCTGCTGGCCAGATGGCAGCAGCAGCCGCTGCCGCTGCTGCCATGCACCACGGAGGAGTGGCTtcatcaacaccctcccacccgGACACCACCACTTCTCCATCAGCTCTGCTCAAGAGAGGGGGTCACCATCACCACCCACATCTTCCACCTCACCATCCCCATCACCATCCACCACAGGGTCCTCCTCCACATTCCCCCTTACATCATCCACACCTTGGCTCACACGGACCAGGGATGCCTCCAGGAGTGCCAACCTCTGCTGCTGGCCTTCTTGTATCGCCTCCCCCTGGCATGGGCATGAGGTCAGCTTTGCACCATATGCCACACCCAATTCCACCTCCCACCCCACAGCAGATGCAACAGCCTCTGCATCCATCCTCTTCGGCATCATCCAGTCCTTCAACTACGGCACCACCGACTGCAAGTTCCCTGGTGTCCCCTCCAGTTCCTCCCACATCATCTTCGACCACTCCTTCATCTGCGCACCATCCACACCCGCATCATCCTCATCATCACCATGTTCAGCCCAGTGTGTATGAGATGGCTGCCCTCACTCAAGACCTGGACACTCAACAAATCACTACCAAGATCAAGGAGGCCCTGTTGGCCAACAATATTGGACAGAAGaTATTTGGTGAGGCTGTTCTGGGTCTCTCACAAGGATCTGTGAGTGAGCTCCTGTCTAAGCCAAAGCCTTGGCACATGCTCAGTATCAAGGGACGTGAGCCATTCATTCGCATGCAACTGTGGCTCAATGACTCGCACAATGTGGAAAAGCTCCAGCACCTGAAGAATGAGAGAAGGGAAGCAAACAAGAGGAGGCGGGGAAGTCATCATGGGAGTGGAGGCTCCGGGGGGCCTGGTGGATCCATGGGGTCTGGCAGTGTGGTCGATAATGGCAGTGACACATCTTCCAATGATACTGCTGACTTCTACCATACTGCACCTGGAAGTCCAGTTGGGAGTACACCGGGAGTTCCTGGAAGCAGTCCTGGGTTGCCTGGTGGCCCTGGGGGTGTTAGCACTCCTCCGGGTCCTTTGAGTCATCACCACAACTTCCTTCACCACCAGCAGGCACAGTCACAAATGCTGGGAAGTGGAGGTTGTGGTCCACCATCAGCCAAGAAGCAGAGGGTTCTATTCTCCGAGGAGCAAAAGGAAGCCTTGAGGCTCGCCTTTGCTCTGGACCCCTACCCAAATATGACAACAATAGACTTCCTGGCACAGGAACTCTCACTATCTTGCCGCACCATTACAAACTGGTTTCACAACCACAGGATGAGGTTGAAGCAGCAACCGACTACACCCACCCAATCCTCTCCGGGACAGGAGGGAAGTTCAAACAGCCGGGGGCCTCAGTCTGGCTCTCCCGtgccccctccaccacccccctcTTTACCACCCCCTCCACCATCACCATTTGATCCTGTCCAGTTCCGTGTTCTCCTCAGCAGGAGACTGCTGGACTTGCAGAAGGATCGGGGAAGCGGTGGTGGTTCAGGAGTCGGTGGTAGTTTAGTCCCTCCCACATCGCTCTCCTTCCCATACTTTAATGCAGCCGCAGCGGCAGCGGCAGCAGCGGCTGCAGCCGCTGCAGCAGCTGCAGCACATCATGCATCCAGTTCGGGCTCATCGGCAGAGAAAGAGGAGCAAGTGAGTGGCCTGGACCTAAGCATGTCCTCACTCAAGCGTGAGCCAATGGAATTcgacgatgatgatgaagatgacatGATAGACGACGATGATGAGGATGACGTGGCGATGGATGCAACAATGACACTCCCTTCGATGTCCTCGAGTGACGTGTCTGATCTTTCCATGAAAGTTGAGCCAGACTCTGGAGCGGTTGAATCAGAACTGAGACAGCAGGTCCGAACCGCTCCATCGCAAAATGTTCAGTCGGGTGGCAGGTCTTCCCGGAGGAAGCCTGCGGCACCACAATGGGTGAACCCGGAGTGGCAAGAGGTGGCAGATGTGGGAGGTATCAGGGGGGTCAGTGCTGGGAGCcgagaggagaagagggaggtCATAATCAATGGCGTCTGCGTGATGCAGACGGATGCCCCATTCAGTGGCTCAAATACTGGCGTTGGTGTCGGCTCGAGTGCATCTCCAGGGAATGTGatagaggatgaggaggaggaagaggaggatgaggaagatggTCCTGTGGACCACACTGTGGTCGGTAGCGATGAGGGACAGGAGTTGGGATCTGGGCGGGAGGAGGATGAGCCTATGGATGAGTCGGGTGGTGGTGAGGGTCAGGGTGGTGAGAACCTCGAGGCGCAGTTGACCGAAAGAACGGGTGAAGTGGATGAGGAATCGGTGGCGGCCGAGAGCCCTAGGCACCCCTGTAGGTCTGATGATGGTGTGGGTGGTGGTGATGAGGAGGAGGGTAAGGGCATCGAGAGTGATGCGGACCCTGCTTTGGTAAGGGAAGACAGGATTGGTGGACCCCTAATGAGTGACAGTGTTTGTGCTGATGAGAGGGGAGTGTCGTGTGTTGAGAGTGGTGTGAAAATGTCGACCGAATTACGGGACGATGATGATGAAGCCGCCATGGATGAGTCTCTGGAGAAACTCCAGAAGAGAATGAAgcgtgaagaggaggaggaagaggaagattgGGAGTTTTGA
- Protein Sequence
- MTVLMSRFRPYESRKDTAGIPGFGSARGGVGGLGEDSMTEERIVHILNEASHAMKTASASLHGVVLGGVGGGNGGGGGQEDSRSNDDSKSPHHGQSSSPLLSGSGKDGSSSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRLEDSMRSPRDHHFPSLLFPHFFSGAGGPGGNAGSGGSTGHPLMDRTQEEIRLALDAYHRELVKLNVAPPPPSSPSSIPGGAPGLPHPPPPSSVPSPASSSAAMATTTNSIVTQAGLLALHQQHQQNMQGHNGMAQDLSLPKIPNGGLEGPGGMGLVKKEVLGPVEHHQLQQQQHHQQQQQQQHQHQQQQQQQQMQQHLQQQAAANEALRHAGSAFSLVRPKTEPGLPGSGSQSAGGGQPGQGACGSTPGASPHGGGVPPSPAPPTPSSLLVGVGSDDFGPSSLASTGASPLQRMASITNALISAPVVPSHVHGSPSQRPLKAVLPPITQQQFDQFNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGSPLGPTKPLSKLSAAMPPSGMDPVSKAMDAVVSSSPSSSAVLSAVVAAGQMAAAAAAAAAMHHGGVASSTPSHPDTTTSPSALLKRGGHHHHPHLPPHHPHHHPPQGPPPHSPLHHPHLGSHGPGMPPGVPTSAAGLLVSPPPGMGMRSALHHMPHPIPPPTPQQMQQPLHPSSSASSSPSTTAPPTASSLVSPPVPPTSSSTTPSSAHHPHPHHPHHHHVQPSVYEMAALTQDLDTQQITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDSHNVEKLQHLKNERREANKRRRGSHHGSGGSGGPGGSMGSGSVVDNGSDTSSNDTADFYHTAPGSPVGSTPGVPGSSPGLPGGPGGVSTPPGPLSHHHNFLHHQQAQSQMLGSGGCGPPSAKKQRVLFSEEQKEALRLAFALDPYPNMTTIDFLAQELSLSCRTITNWFHNHRMRLKQQPTTPTQSSPGQEGSSNSRGPQSGSPVPPPPPPSLPPPPPSPFDPVQFRVLLSRRLLDLQKDRGSGGGSGVGGSLVPPTSLSFPYFNAAAAAAAAAAAAAAAAAAHHASSSGSSAEKEEQVSGLDLSMSSLKREPMEFDDDDEDDMIDDDDEDDVAMDATMTLPSMSSSDVSDLSMKVEPDSGAVESELRQQVRTAPSQNVQSGGRSSRRKPAAPQWVNPEWQEVADVGGIRGVSAGSREEKREVIINGVCVMQTDAPFSGSNTGVGVGSSASPGNVIEDEEEEEEDEEDGPVDHTVVGSDEGQELGSGREEDEPMDESGGGEGQGGENLEAQLTERTGEVDEESVAAESPRHPCRSDDGVGGGDEEEGKGIESDADPALVREDRIGGPLMSDSVCADERGVSCVESGVKMSTELRDDDDEAAMDESLEKLQKRMKREEEEEEEDWEF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00797072;
- 90% Identity
- iTF_00797135;
- 80% Identity
- iTF_01286261;