Pnym107284.1
Basic Information
- Insect
- Pyrrhosoma nymphula
- Gene Symbol
- Arid2
- Assembly
- GCA_963573305.1
- Location
- OY754334.1:134413377-134415157[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-17 5.4e-13 52.2 0.0 1 48 15 62 15 89 0.91 2 2 0.27 1.1e+04 -0.0 0.0 27 40 109 122 82 127 0.80
Sequence Information
- Coding Sequence
- ATGGCCAAAATTCTCGACAAGGACCCAGTCACTTACCAAAGGGAACGTGATGGTTTTCTACGAGAACTACGGCAGTTCCACGACACCCGAGGGACTCCATTCCGTAGAATACCAAAAATTAATGGACATGAAGTAGACTTATATCTGCTTTACGTTCTAGTCACAGAACAAGGAGGTTGGGAAAAGCAAGGTCAGGGTCCTGCCGCGCTCAGACTCCTTCAATATAACTACCGGCGGACTCCCCTGCACACGTgtttttcctccacccccacggAGCCAGCCGacctcctcccctcacccccctctgATTCTCCCGCCTTCTTCCCCAACCCCCCTCTCCGCCTCTTTCATCTCTTTGCCGCGATCTTCGGCCTATTGGCCACCGCGAACCTCCGTGATCCTCCCTAG
- Protein Sequence
- MAKILDKDPVTYQRERDGFLRELRQFHDTRGTPFRRIPKINGHEVDLYLLYVLVTEQGGWEKQGQGPAALRLLQYNYRRTPLHTCFSSTPTEPADLLPSPPSDSPAFFPNPPLRLFHLFAAIFGLLATANLRDPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00306734;
- 90% Identity
- -
- 80% Identity
- -