Pumb007155.1
Basic Information
- Insect
- Pyrrhia umbra
- Gene Symbol
- GATA-B
- Assembly
- GCA_963891755.1
- Location
- OY982920.1:136143-143152[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6e-18 3.5e-14 52.9 3.9 1 34 212 244 212 246 0.97 2 2 1.9e-17 7.8e-14 51.8 7.2 1 34 279 311 279 313 0.97
Sequence Information
- Coding Sequence
- ATGTTGTCACTTTTGGTTTGTAGGGGCGGCGGCGGAGGAGGAGGAGGGGGCGGCGCGGTATACACGCGCTGCGCGTACACTAGTGGTTCGCCGTACTTCGGCAACGGGAATGAGATTACCACGCAGCCACAGATCTGGACGTCCAGCGCAGGTGGTTCCCCGAACTACGGCAGCAGCGGCGTGGTGCTGGGCGAGGAGTACGCGGAGGGCGGCGGCGCGGAGGGCGCGGGGGGCGGCTCGCTGCCGGCCTTCAGCGCGCGCTTCGGCGGCGCCTTCGCGTGCGCCACGTCGCGCCCCAGCACCGTGTACGGCTCCGGCGGCCTGGCCGCGCCCTACTCGCACCAGGAGGTGTGGAACCTGGAGAGTAATCGTCGACCACAAATGTCCGCGGCGGCCAGTCTCTCTGCCACGGGCATAGCGCGGTGTCGCGGGAACAATGGCGGCTCGGGTGACGGCGGGTCGTTGGTCGCGCTGGCGAGTGCTGCGTGCGCggcggtgacgtcacgcgcgTCCTTGCGGCGGCGACGTGCGGCGCTGTGTCAGCACGCGGGCTCACGTGCGCTTCTCGTCGGCGATGCTTGCGACTGTCACTGCCAAGTCGACATGGCGGAGTTTTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCATCCACACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTGTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGCCTGGCCGCGGCCCACGCGCCCCCGCACGACATGGGCACGAAGCGGCCGGGCATGTCGTGCACCAACTGCCAGACCACGACCACGTCGCTGTGGCGCCGCAACTCGCTCGGCGAGACCGTGTGCAACGCGTGCGGGCTCTACTACAAGCTGCACAACATCAACCGGCCGCTCGCCATGAAGAAGGACTCCATACAGACGAGAAAGCGGAAGCCTAAGAACAGTATAAAACAGGAACGAAGTATCAAGGCAAGCGTCCAGCGCGTCGTCGCGTCGGGGGTCAAGATTGAGAACCAACGTGAGTATCTCGTGCCGCCCGCGCGCCGAGCTCGGCCGGCGCCGGCGGCACTCACCCGCTCTCTCTGTGCAGTGGACGGCGGCAGCGGGCCGCGCGAGCCGCTGGCGCTCAACTACTACATGCAGCACGCGCTCAAGGTGGAGgagccgccgcccgcgcacgcgcacgcgcacGCCGCGCACGCGCAGCACGCCGGGCACGCCGCGCACGCGCAGCACGCCACGCACGCGCCGCACGCCGCGCACGCGCTGTACGACGACGAGTACCGGCGCGCCGCCGACGAGCGGCTGGAGCGGCCCACCGTCGTGTCCATGGGCAGCtga
- Protein Sequence
- MLSLLVCRGGGGGGGGGGAVYTRCAYTSGSPYFGNGNEITTQPQIWTSSAGGSPNYGSSGVVLGEEYAEGGGAEGAGGGSLPAFSARFGGAFACATSRPSTVYGSGGLAAPYSHQEVWNLESNRRPQMSAAASLSATGIARCRGNNGGSGDGGSLVALASAACAAVTSRASLRRRRAALCQHAGSRALLVGDACDCHCQVDMAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRLAAAHAPPHDMGTKRPGMSCTNCQTTTTSLWRRNSLGETVCNACGLYYKLHNINRPLAMKKDSIQTRKRKPKNSIKQERSIKASVQRVVASGVKIENQREYLVPPARRARPAPAALTRSLCAVDGGSGPREPLALNYYMQHALKVEEPPPAHAHAHAAHAQHAGHAAHAQHATHAPHAAHALYDDEYRRAADERLERPTVVSMGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -