Basic Information

Insect: Pyrrhia umbra
Gene Symbol: -
Assembly: GCA_963891755.1
Location: OY982947.1:4043498-4052736[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 33 0.73 64 5.1 0.4 1 23 80 103 80 103 0.91

2 33 0.031 2.7 9.5 0.1 2 23 130 152 129 152 0.95

3 33 0.0085 0.74 11.2 2.0 2 23 175 196 174 196 0.96

4 33 3.5 3.1e+02 3.0 0.9 1 23 200 222 200 222 0.81

5 33 0.012 1 10.8 2.5 1 23 227 250 227 250 0.96

6 33 0.84 74 4.9 1.3 2 23 258 280 257 280 0.86

7 33 0.00013 0.011 17.0 1.8 2 23 288 310 287 310 0.96

8 33 0.0049 0.43 12.0 0.9 1 23 316 338 316 338 0.98

9 33 1.7e-05 0.0015 19.7 1.5 1 23 344 366 344 366 0.99

10 33 0.1 9 7.8 2.1 1 15 372 386 372 388 0.88

11 33 4e-05 0.0034 18.6 0.7 1 23 460 483 460 483 0.97

12 33 0.5 43 5.7 0.1 2 23 512 534 511 534 0.94

13 33 0.58 51 5.5 5.5 2 23 557 578 556 578 0.96

14 33 0.00026 0.022 16.0 1.0 1 23 582 604 582 604 0.99

15 33 0.24 21 6.7 0.6 1 23 609 632 609 632 0.90

16 33 1.6 1.4e+02 4.1 2.7 2 23 640 662 640 662 0.84

17 33 0.00012 0.011 17.0 2.4 1 23 669 692 669 692 0.98

18 33 0.0014 0.12 13.7 4.8 1 23 698 720 698 720 0.98

19 33 7.9e-06 0.00069 20.8 0.1 1 23 726 748 726 748 0.98

20 33 0.035 3.1 9.3 0.5 1 14 754 767 754 768 0.92

21 33 0.0083 0.72 11.3 1.1 1 23 835 858 835 858 0.95

22 33 2 1.8e+02 3.8 0.2 2 23 886 908 885 908 0.93

23 33 0.0067 0.59 11.5 1.6 1 23 1003 1026 1003 1026 0.94

24 33 0.011 0.92 10.9 0.4 3 23 1125 1146 1123 1146 0.91

25 33 0.0072 0.63 11.5 0.1 2 23 1172 1194 1171 1194 0.94

26 33 0.0011 0.098 14.0 0.5 2 23 1217 1238 1216 1238 0.97

27 33 0.098 8.6 7.9 0.1 1 23 1242 1264 1242 1264 0.96

28 33 0.00066 0.058 14.7 3.8 1 23 1269 1292 1269 1292 0.98

29 33 0.17 15 7.1 0.7 2 23 1300 1322 1299 1322 0.94

30 33 0.00044 0.038 15.3 2.3 2 23 1330 1352 1329 1352 0.96

31 33 7e-05 0.0061 17.8 3.3 1 23 1358 1380 1358 1380 0.98

32 33 6.9e-05 0.006 17.8 0.6 1 23 1386 1408 1386 1408 0.99

33 33 0.00046 0.04 15.2 4.4 1 23 1414 1437 1414 1437 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	33	0.73	64	5.1	0.4	1	23	80	103	80	103	0.91
2	33	0.031	2.7	9.5	0.1	2	23	130	152	129	152	0.95
3	33	0.0085	0.74	11.2	2.0	2	23	175	196	174	196	0.96
4	33	3.5	3.1e+02	3.0	0.9	1	23	200	222	200	222	0.81
5	33	0.012	1	10.8	2.5	1	23	227	250	227	250	0.96
6	33	0.84	74	4.9	1.3	2	23	258	280	257	280	0.86
7	33	0.00013	0.011	17.0	1.8	2	23	288	310	287	310	0.96
8	33	0.0049	0.43	12.0	0.9	1	23	316	338	316	338	0.98
9	33	1.7e-05	0.0015	19.7	1.5	1	23	344	366	344	366	0.99
10	33	0.1	9	7.8	2.1	1	15	372	386	372	388	0.88
11	33	4e-05	0.0034	18.6	0.7	1	23	460	483	460	483	0.97
12	33	0.5	43	5.7	0.1	2	23	512	534	511	534	0.94
13	33	0.58	51	5.5	5.5	2	23	557	578	556	578	0.96
14	33	0.00026	0.022	16.0	1.0	1	23	582	604	582	604	0.99
15	33	0.24	21	6.7	0.6	1	23	609	632	609	632	0.90
16	33	1.6	1.4e+02	4.1	2.7	2	23	640	662	640	662	0.84
17	33	0.00012	0.011	17.0	2.4	1	23	669	692	669	692	0.98
18	33	0.0014	0.12	13.7	4.8	1	23	698	720	698	720	0.98
19	33	7.9e-06	0.00069	20.8	0.1	1	23	726	748	726	748	0.98
20	33	0.035	3.1	9.3	0.5	1	14	754	767	754	768	0.92
21	33	0.0083	0.72	11.3	1.1	1	23	835	858	835	858	0.95
22	33	2	1.8e+02	3.8	0.2	2	23	886	908	885	908	0.93
23	33	0.0067	0.59	11.5	1.6	1	23	1003	1026	1003	1026	0.94
24	33	0.011	0.92	10.9	0.4	3	23	1125	1146	1123	1146	0.91
25	33	0.0072	0.63	11.5	0.1	2	23	1172	1194	1171	1194	0.94
26	33	0.0011	0.098	14.0	0.5	2	23	1217	1238	1216	1238	0.97
27	33	0.098	8.6	7.9	0.1	1	23	1242	1264	1242	1264	0.96
28	33	0.00066	0.058	14.7	3.8	1	23	1269	1292	1269	1292	0.98
29	33	0.17	15	7.1	0.7	2	23	1300	1322	1299	1322	0.94
30	33	0.00044	0.038	15.3	2.3	2	23	1330	1352	1329	1352	0.96
31	33	7e-05	0.0061	17.8	3.3	1	23	1358	1380	1358	1380	0.98
32	33	6.9e-05	0.006	17.8	0.6	1	23	1386	1408	1386	1408	0.99
33	33	0.00046	0.04	15.2	4.4	1	23	1414	1437	1414	1437	0.97

Sequence Information

Coding Sequence: ATGCAAGATAATGCTTCCAAAATATTCAATAACTGTTTCCTTTTCTTTGTAGGTGTTCAACGTAACGTGAACGCCCAGATTGAAAAGGATAACAACAAAAAAGCGACACGCTCTCGAATAATAATTGAACAACCTAAGGATCTCAAAGTTAATgagttaaaaaaacaaagaagtAACATACGCCTTATCTTGCAATGTACCAATGCTACGCCTATACGGTGCAGAGGAGGCATCGGATACGCCTGCTGTTTTTGCGCAGACGAGTTCCCAGATccaactgatttaaaaaaacatactcTAGAAGGTCACGATGATAAAACTAAACTCAAATTCATGGCTGGCAAAATGATGTTCTCATATCTCGTCAAATTAGACATCACTAATCTTTCATGTAAAATTTGCGACGAAAAAATTGATACTCTAGAACAACTTGTCAATCATTTGATTAAAACACACGATAAAAAGATTTACACTGATATTAAAAGCCATATAATGACTTTCAAGTTCAGTGATGATGTCTTACGATGCATGTTTTGCCAAAACGTGTTTTACAAATTCAAGAATTTGCAACAGCATATGAACGTACATTGCAGGAACTTTGTATGTGAATTTTGTGATGCAGGATTCATCAATAAACACATACTAGCCTGCCATATGGAAGCACATAAAACTGGCACATTTAAATGCGATTTATGCACAAAAGTTTTCGATACTAATAGGAAGAAGAAGAGTCACGAGAAATCCGTCCACATCCATGCGAATATGCTCAACAAATGCGGCTACTGTAATCTGAAATTCACAAATTACAAGAAAAGAGATGATCATTTAGTGAAAGTTCACGGAGTTGCCATGAAAGCTGTTAAATGTCATGCGTGCGATAAGACGTTTGATAACAAGAGCGCTTTAAGTATTCACACGAAACGAGACCACTTGATGGAGAGGAAGTACAAATGTACGCTATGCGAAATGAATTTTTTCGGCTCCAACGAATTGAAACTTCACATGGTCAAGCATACAGGGGTCAGGGAGTTTAAGTGTTCAGTTTGCGCTAAATCGTATGGAAGgaaaaaaactttgaaagagCATATGAGGATTCACAATGATGATAGGCGGTTTAAATGCGAACACTGCGGTCAAGCATTCGTGCAAAAATGTAGCTGGAAAGGTAACAAAGGCAAAGTGAACACGaaaactgaaattgaaaatgtaGACACAGCTGTTTTAGTAATCGTAGAACCAGCGGAGAAAGACATAACCAAGGTAATGGATAAACCCAAAATTATAGCGCGAGGACTCTTAGAAAAACATCAACATAACCTGAAAGTAATCTTGCAACGTAGCAATGCTACAACTATACTGCGTTACGGAGGTGTGGGCTACATGTGCAGTTACTGTTTGAAGGAATTTCCGCAGCCTAAAGACCTTAAGAAACATACTTTGACGGTCCACACATCTGAGTCAGACCCTACAGCTGGGTGCGCGCGTTCTGTGCCACTTTCAGAATACTACATGAAACTAGACATCACCGATCTTAAGTGCAAACTATGTTCTATGGATATAGACACTCTTGAAGATTTAACAACCCATCTACAAGAAGAACATGATGAATTTATACATACTGACATTCCAAGCCAAATAATGCCTTTCAAATTTGATACAGAGGATCTCACGTGCTGTATTTGTTCAATTACTTTCGACAAGTTCAAAAAACTGTTAGAGCATATGCACAAACATTGCAGGAACTACGTTTGTGAAGTTTGCGATGCAGGATTCATCAATAAAGGCTGTTACACCCGTCATACGAACACACACGTAAAGGGATTCTTCCCCTGCAGCCTTTGTTCCAAGGTCTTCGATACGATCATGAAAAAACGATCTCATGAGAGAGCCAATCACACCCATACCAATATGCTGAATAGATGTGGGTATTGCAGTAAGGGTTTTAGGGAACATCATCTAAAAGAGCAGCATTTGTATGAAGTCCACGGCGTAAGCAAGAAGGAATACAAATGCAATGCTtgcgataaaaaatattctaccaAACGCAAACTGAGAGTCCATGTTAAAAGAGACCATTTACTGGAGAGGAGGCACAAATGTCCAACTTGTGATATGAGATTCTTTTCTTCTCATGAGATGAAGAAACACATTGTTACTCATACTGGTGAAAAGGAATTTGAATGTCCAGTATGCTTGAAAGCGTTTGGAAGGAAATCTACGCTAAGTGCACACTTGAGAATTCATAATGATGATAGAAGATTTAAATGTGAACATTGCGGAATGGCTTTCGTTCAAAAATATCAGGAAGAAGTGGCAACAGCAACTAAACTCAAAAAAGAACCGAAAGCTGAAGAATCTAACAaagaagaattaattaaaataaattcagaaaACACACCTCGTAAACGTATTAAACGGCTGCTTCATAAGCATCTTACTAATCTGAAGATCATTCTAGAATATACTAACGCGACAATGATTTTACGACATGGAGATAAGGGATACCTCTGCTGTTATTGTAACGAAGGATTTGAGAAACCTATGAAATTGAAAGCACATACCTTGACTGCGCATGTTAATGAGGAGAAATTTTACGGCAAAATACCATCCACTGGACCTTCAAGATTTCTAGTTAAACTAGACATAACAAACCTCGAATGCAAGCTTTGTAGCACCAGATTAGAATCACTGGAAAATATCTTCGAACATTTAAAAGAAgaacacaaaatgagttttCATACAGACATTAAAAACCAAATATTTCCATTCAAATTTAATACTGAACAATTAACATGCTGTGTGTgtgTTCCAAAAGttgagaaaaaagaaaaatccgACACAGACCTATCAGATACAGAAAGTATCAGTGAAGTAGATTCATTGTGCGCTCAAAGAGATCAGGATAAAACAGCGCCGAGGAATGAATTGTCGAAACATAGgaataatattaaagaaatactCCTTAATTCTAATGCAACACCTATACGACGGCACGTAGGGATTGGATACACATGTTGCTATTGCGAAGAGCAGTACGTAAAACCTGCAGACTTAAAGAAACATACTCTAGAAACTCATAAAACGATCTCAGAAGCGAACTTTATGAAGAACATGAACATGTCGGAATATGTCGTCAAGATAGACATAACTGgactaaaatGTCACGGGAGGGGGACTAGGataatcaaaatagaaaaacctACAAAACCGACCGTTGAATTGAAGTTCTTCTCAAAAATATCAACGAGGGAGTCGAATGTCGTACTTAACGGATCTCTAACGGAAACTATGAAGAATAGGATCAATCTTAGAAATATATTGCTCAACTCTAACGCCAATCCAATAAGATGCAAAGATGGGCATGGGTACGGCTGTTCTTTCTGCCCAAAACAATTTCAGGACCCGACTGCATTGAAGAAGCACTTTCTAGAAGAACACAACAACGATAAACTGATAAAATACATGTCAGCAAAACTGTTTGAACATGTCATTAAATTAGATATAACGTACTTAAATTGCGCCCTCTGTGACAAAGATTTTCAACAACTAGACGACCTTGTGGTGCATCTAAAAAACGAACATAATAAACCGATGTATGTAGACGCTAAAAGCCAAATAGTCCCCTTCCGATTCGATTCGCCCGCATTAAAATGTGTGATATGCACCACAGAATTCGTTACTTTCAAACTTCTACAGGAACACATGAACTCGCATTTCGGAAACTATATTTGTGAGATATGTGGTGCAGGGTTTGTTACTGACAGGCTTCGGTTAAGTCATGTGAAACGCCACGACAGCGGTGAATATAAATGTGACCAATGCGACAAAACATTTACTAACCAACTCAAAAGACGCGAGCACCAGAAACGGACTCATCTTGGTCTCGGCAAGAGAAATAAATGTACTTACTGCTCAGAAAGATTTGTCGATTACTGGAAAAAGATGGATCATATGGTCAAAGAGCATGGTATGCCTCCTGTTATACTAAAATGTTCAGCTTGTGAGCGAACTTTTACTAACCAGAGGTCATTATCCAGACATACGAAGAAAGATCATCTCATGGAACGAAGACACAAATGCAGTGAATGCGATATGAGATTTTTCGGAAAGAGCAGTTTGCAGAAACACATGGCTAAGCACACGGGACTGAGGCAGTTCAGGTGTGATGTCTGCTTGAAGGCCTACGGAAGGAAGAATACTTTGAGAGAACATATGAGGATCCACGCGAATGATAGAAGATTTTCTTGCGTGCATTGTGGACAGGCGTTTGTGCAAAAGTGTAGCTGGCGGAGTCATATGCGATCTAAACATGGGGAAGAAGTTTGA
Protein Sequence: MQDNASKIFNNCFLFFVGVQRNVNAQIEKDNNKKATRSRIIIEQPKDLKVNELKKQRSNIRLILQCTNATPIRCRGGIGYACCFCADEFPDPTDLKKHTLEGHDDKTKLKFMAGKMMFSYLVKLDITNLSCKICDEKIDTLEQLVNHLIKTHDKKIYTDIKSHIMTFKFSDDVLRCMFCQNVFYKFKNLQQHMNVHCRNFVCEFCDAGFINKHILACHMEAHKTGTFKCDLCTKVFDTNRKKKSHEKSVHIHANMLNKCGYCNLKFTNYKKRDDHLVKVHGVAMKAVKCHACDKTFDNKSALSIHTKRDHLMERKYKCTLCEMNFFGSNELKLHMVKHTGVREFKCSVCAKSYGRKKTLKEHMRIHNDDRRFKCEHCGQAFVQKCSWKGNKGKVNTKTEIENVDTAVLVIVEPAEKDITKVMDKPKIIARGLLEKHQHNLKVILQRSNATTILRYGGVGYMCSYCLKEFPQPKDLKKHTLTVHTSESDPTAGCARSVPLSEYYMKLDITDLKCKLCSMDIDTLEDLTTHLQEEHDEFIHTDIPSQIMPFKFDTEDLTCCICSITFDKFKKLLEHMHKHCRNYVCEVCDAGFINKGCYTRHTNTHVKGFFPCSLCSKVFDTIMKKRSHERANHTHTNMLNRCGYCSKGFREHHLKEQHLYEVHGVSKKEYKCNACDKKYSTKRKLRVHVKRDHLLERRHKCPTCDMRFFSSHEMKKHIVTHTGEKEFECPVCLKAFGRKSTLSAHLRIHNDDRRFKCEHCGMAFVQKYQEEVATATKLKKEPKAEESNKEELIKINSENTPRKRIKRLLHKHLTNLKIILEYTNATMILRHGDKGYLCCYCNEGFEKPMKLKAHTLTAHVNEEKFYGKIPSTGPSRFLVKLDITNLECKLCSTRLESLENIFEHLKEEHKMSFHTDIKNQIFPFKFNTEQLTCCVCVPKVEKKEKSDTDLSDTESISEVDSLCAQRDQDKTAPRNELSKHRNNIKEILLNSNATPIRRHVGIGYTCCYCEEQYVKPADLKKHTLETHKTISEANFMKNMNMSEYVVKIDITGLKCHGRGTRIIKIEKPTKPTVELKFFSKISTRESNVVLNGSLTETMKNRINLRNILLNSNANPIRCKDGHGYGCSFCPKQFQDPTALKKHFLEEHNNDKLIKYMSAKLFEHVIKLDITYLNCALCDKDFQQLDDLVVHLKNEHNKPMYVDAKSQIVPFRFDSPALKCVICTTEFVTFKLLQEHMNSHFGNYICEICGAGFVTDRLRLSHVKRHDSGEYKCDQCDKTFTNQLKRREHQKRTHLGLGKRNKCTYCSERFVDYWKKMDHMVKEHGMPPVILKCSACERTFTNQRSLSRHTKKDHLMERRHKCSECDMRFFGKSSLQKHMAKHTGLRQFRCDVCLKAYGRKNTLREHMRIHANDRRFSCVHCGQAFVQKCSWRSHMRSKHGEEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -