Ppec019956.1
Basic Information
- Insect
- Pyrocoelia pectoralis
- Gene Symbol
- stc
- Assembly
- GCA_036250285.1
- Location
- CM070076.1:48950613-48957018[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.96 4.7e+04 -4.1 1.6 15 19 326 330 325 330 0.81 2 14 0.066 3.2e+03 -0.3 0.3 4 10 359 365 358 367 0.95 3 14 1.6e-06 0.078 14.4 14.5 3 19 373 389 365 389 0.87 4 14 0.28 1.4e+04 -2.4 0.7 5 10 414 419 414 419 0.90 5 14 1.5e-06 0.072 14.5 15.7 1 18 425 442 425 443 0.98 6 14 3.7e-10 1.8e-05 26.0 14.7 1 19 483 501 483 501 0.99 7 14 9.5e-07 0.046 15.1 16.3 4 19 548 563 541 563 0.87 8 14 1 4.8e+04 -4.4 1.4 5 10 592 597 592 597 0.90 9 14 0.039 1.9e+03 0.4 12.4 1 11 603 613 603 625 0.90 10 14 1.3e-09 6.4e-05 24.3 13.2 1 19 630 648 630 648 0.98 11 14 1 4.8e+04 -4.8 1.9 6 10 677 681 676 681 0.57 12 14 0.00014 6.7 8.2 12.6 8 18 693 703 687 704 0.87 13 14 1.3e-05 0.65 11.5 14.9 1 17 740 761 740 763 0.85 14 14 0.00082 40 5.8 15.5 1 19 769 788 769 788 0.96
Sequence Information
- Coding Sequence
- ATGTCCAACTGGTACTCAAATTCCGGAGGACCTTTTACCGAAGGTCAAAATAACTATAGTGAAGCGGTTTACAACAATTATTCCAATGTGGACTATAATGTGCCAAATCCCTACTCAAATCAAAATGGGATTCATAATGTTGCACAAtatagttcaaattttcaatatccAACTGTTCATTTCACAAGTAACCCACCGCCTTCCAATATGAGTAGTTTTCCACAAGCGACTATGGCAAACCACACCGGTTTCGTTGGTAATTCTTTTGATGGAAGTAAACCGCATTCGTCTGTAACGCTTCAATCTAATCTGACGCCGTTCGCTAAAGAATTTACGCCCGCACATTCTCACGGAAGCGGCGATGCTTATGGAAATGATGGTAAAAAACAAGGTGCGGTAAAAAAGCGCACTTATTGGAACAAAGATAGGCGTTTCGATAATACCAAGCAAAATCACGATAATTCGAGATATAATTACGAAAATGTGCCCAATAAAAATCGTACATTTGATGAGTCGCGTCAATCGGCCGATTATGGTTATAATTCACGATTTGGCAGATCCGGTGGTGGATACTATAGGAATAATAATAGCAATCACAATTACAGAAATTCGTACCGACGAGATTATTACGATAATAGAAAAGATGATCATTATGAAAGACGGTCTCAAAATTTGCAGGACTACCAAAGGAATGAAAAGAAGTATAGCAATAAGGCAGAGATtactaaaaagaaaacaaacgaATGTTACGATAAAAGGGAAAAGAAGGaccatttaaagaaaaaacTGGATGCGGCATCACAGAGGGAACGTCTAGAACATTTAATAGTCTGCCGTCTTTTGGAATGTTTAGTTTGTTGTGAGAAACTTCGACATAACGATCAAATTTGGTCGTGTGGACAATGTTACCACATTTTACATTTAAGCTGCACAATAAAATGGGCTCAATCGTCGAAAATGGAATCGGGATGGAGATGTCCCGCCTGTCAAAAAGTATATCAAGACGAACCGTTCAAATATAAATGCTATTGCGAAAAACAAGTTCATCCCCCTTTAGATCCTAGCGGGATTCCGCACAGTTGTGGCTCGGTTTGTGGACGTAAGGGACGAGCGTGCTTGCACACCTGCACTTTAATATGCCATCCTGGGCCGTGTCCCGATTGTTCGGTGATGGTGTCAAAATCTTGTGCGTGTTTGTCCACACAACTGATCGTCAAATGTGGTTCCAATGTTCCCGTCAACTGTCAGAATTTGTGTAACAAATTTCTTGGGTGTGGTATCCACCAGTGTGGTGGCAAATGTCACGAGGGCGATTGTGACTCGTGCGGTGAAATTTTACGTCAAGAATGTTATTGTGGTAAAGAAGGACGAAAAATTAACTGCACAAAGGAGGCTAACGGAGAACTGCAATACGAGTGTGGAGATATATGTGACAAATTATTAATGTGTGGAAATCACAAATGCGAACGTAAATGTCATAAGGGTTCATGCGACACTTGTCCTAAATCTCCAAATCTGATTAATACTTGCCCGTGTGGGCAAACAAACTTGCTAAAAAGAAGGAAATCGTGCCTTGATCCAATTCCTTGCTGTGATAAGATATGCTCAAAATCATTGACTTGCGGACAACCCAGTGATCCTCATAGGTGCGAAGTGGGATGTCATGAAGGACCGTGTCCACCTTGTCCAAAAAATACCATTGTACGTTGTAGGTGTGGTCAAATGGACAAAAAACTTCTTTGCGTGGAACTTACAACTAAAGCGGATGATGCTCGTTGTTCAAAGAAATGTCAAAAGagaCGGCAGTGTGGAAAGCATAGGTGTAACCAACAATGCTGCATTGAATTTGAACACATCTGCCCACTTCCATGCAATCGCTTATTGTCGTGTGGACAACACAACTGTGCAGAACCTTGCCACATTGGACGATGTCCACCTTGTTGGCGTACAAGTTTTGATGAATTATATTGTGAATGTGGTGCCAGTGTATTATTCCCACCGGTGGCCTGTGGAACACGCCCTCCACCTTGCCATCAAGTTTGCTCTCGTCCGAGAACATGTGAGCATGAAGCCAATCACACGTGCCACCCGGGTCCTTGTCCCCCCTGCGTCGTTTTAACAACACGTTGGTGCCATGGCAAACACGAGCAACGATCTACAATCCCTTGCCACCAAAAAGATTTCTCGTGCGGATTACCTTGTGGAAGAGATATGTCCTGCGGAAAACACAAGTGCATACAAACATGCCATAAACGCTCTTGTCCGCATGAATGTAATCAACCTTGTACCGAACCGCGTAATTTATGCGGTCATCCTTGTAGTGCACCCTGTCATCTATCGCCGTGTCCGGAAACTCCTTGCAAACAACAGGTACAGGTTACTTGTCAATGTGGGTTACGTAAAAGCACTCGCACTTGCGTCGATCTTTCGGCGGAATATCAGAATATTGCGATGTCTCAACTTGCATCAAAAATGGAACAGATTCAAATGGGACATACCGTCGATGTCACCGATCTTATCAGCGGGCAAAAACGTACTTCCTTTAAAACgTTGGATTGTAACGATGAATGCCGATTAGTTGAACGAAATCGTCGATTAGCTATAGGTTTACAAATACGAAATCCCGACCTAAGTTCTAAATTAACACCTCGATATTCCGATTATATGCGCGGATGGGCGAAAAAGGATCCCAAATTTTGTCAATACATCCACGAGAAGTTAACGGAATTAGTGCAATTGGCCAAACAGAGTAAGCAAAAGAGTAGAGCGCATTCTTTTGAAACTATGAATCGAGAAAAGCGCCATTTTGTTCACGAATATTGTGAACATTTCGGCTGCGATAGTGCCGCTTATGATCCAGAGCCTAATCGAAATGTGGTTGCTACTGCGTATAAAGATAAATCTTGGTTACCGAGTTACAGCTTATTAGAAGTAATTCAAAGGGAAAACGGACAAAGAAAAGTACCTGGACCTCAGCAACTTGGGAAAGCGTCTACTTCTAAAACGGAAACAGTTTCATTTAAGCTTCCGGGCCATATTCCGAGACCGGCAACTCCTCCTGGCGAATATGTAGATTACTTTAATAATCCGCCAACATAG
- Protein Sequence
- MSNWYSNSGGPFTEGQNNYSEAVYNNYSNVDYNVPNPYSNQNGIHNVAQYSSNFQYPTVHFTSNPPPSNMSSFPQATMANHTGFVGNSFDGSKPHSSVTLQSNLTPFAKEFTPAHSHGSGDAYGNDGKKQGAVKKRTYWNKDRRFDNTKQNHDNSRYNYENVPNKNRTFDESRQSADYGYNSRFGRSGGGYYRNNNSNHNYRNSYRRDYYDNRKDDHYERRSQNLQDYQRNEKKYSNKAEITKKKTNECYDKREKKDHLKKKLDAASQRERLEHLIVCRLLECLVCCEKLRHNDQIWSCGQCYHILHLSCTIKWAQSSKMESGWRCPACQKVYQDEPFKYKCYCEKQVHPPLDPSGIPHSCGSVCGRKGRACLHTCTLICHPGPCPDCSVMVSKSCACLSTQLIVKCGSNVPVNCQNLCNKFLGCGIHQCGGKCHEGDCDSCGEILRQECYCGKEGRKINCTKEANGELQYECGDICDKLLMCGNHKCERKCHKGSCDTCPKSPNLINTCPCGQTNLLKRRKSCLDPIPCCDKICSKSLTCGQPSDPHRCEVGCHEGPCPPCPKNTIVRCRCGQMDKKLLCVELTTKADDARCSKKCQKRRQCGKHRCNQQCCIEFEHICPLPCNRLLSCGQHNCAEPCHIGRCPPCWRTSFDELYCECGASVLFPPVACGTRPPPCHQVCSRPRTCEHEANHTCHPGPCPPCVVLTTRWCHGKHEQRSTIPCHQKDFSCGLPCGRDMSCGKHKCIQTCHKRSCPHECNQPCTEPRNLCGHPCSAPCHLSPCPETPCKQQVQVTCQCGLRKSTRTCVDLSAEYQNIAMSQLASKMEQIQMGHTVDVTDLISGQKRTSFKTLDCNDECRLVERNRRLAIGLQIRNPDLSSKLTPRYSDYMRGWAKKDPKFCQYIHEKLTELVQLAKQSKQKSRAHSFETMNREKRHFVHEYCEHFGCDSAAYDPEPNRNVVATAYKDKSWLPSYSLLEVIQRENGQRKVPGPQQLGKASTSKTETVSFKLPGHIPRPATPPGEYVDYFNNPPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -