Basic Information

Insect: Pyrocoelia pectoralis
Gene Symbol: -
Assembly: GCA_036250285.1
Location: CM070083.1:1536636-1539788[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00093 0.16 13.8 0.9 3 23 42 62 41 63 0.96

2 15 4.3 7.5e+02 2.3 1.0 3 23 157 179 155 179 0.88

3 15 0.00033 0.057 15.3 4.2 1 23 182 205 182 205 0.96

4 15 0.0079 1.4 10.9 3.9 2 23 212 234 211 234 0.95

5 15 0.0042 0.73 11.8 4.8 1 21 372 392 372 393 0.95

6 15 0.00045 0.079 14.8 2.2 2 23 405 427 404 427 0.94

7 15 0.036 6.3 8.8 1.2 1 23 430 453 430 453 0.96

8 15 3.2 5.6e+02 2.7 3.9 3 23 456 479 455 479 0.93

9 15 7.1 1.2e+03 1.6 0.2 1 23 483 506 483 506 0.90

10 15 2.9 5e+02 2.9 1.4 2 23 513 535 512 535 0.92

11 15 0.088 15 7.6 0.9 2 23 544 566 543 566 0.94

12 15 0.12 20 7.2 0.2 3 23 573 594 572 594 0.93

13 15 8.1 1.4e+03 1.4 2.1 3 23 750 771 749 771 0.94

14 15 0.95 1.7e+02 4.4 0.4 2 23 778 800 777 800 0.90

15 15 0.18 31 6.6 0.8 1 23 813 835 813 835 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00093	0.16	13.8	0.9	3	23	42	62	41	63	0.96
2	15	4.3	7.5e+02	2.3	1.0	3	23	157	179	155	179	0.88
3	15	0.00033	0.057	15.3	4.2	1	23	182	205	182	205	0.96
4	15	0.0079	1.4	10.9	3.9	2	23	212	234	211	234	0.95
5	15	0.0042	0.73	11.8	4.8	1	21	372	392	372	393	0.95
6	15	0.00045	0.079	14.8	2.2	2	23	405	427	404	427	0.94
7	15	0.036	6.3	8.8	1.2	1	23	430	453	430	453	0.96
8	15	3.2	5.6e+02	2.7	3.9	3	23	456	479	455	479	0.93
9	15	7.1	1.2e+03	1.6	0.2	1	23	483	506	483	506	0.90
10	15	2.9	5e+02	2.9	1.4	2	23	513	535	512	535	0.92
11	15	0.088	15	7.6	0.9	2	23	544	566	543	566	0.94
12	15	0.12	20	7.2	0.2	3	23	573	594	572	594	0.93
13	15	8.1	1.4e+03	1.4	2.1	3	23	750	771	749	771	0.94
14	15	0.95	1.7e+02	4.4	0.4	2	23	778	800	777	800	0.90
15	15	0.18	31	6.6	0.8	1	23	813	835	813	835	0.96

Sequence Information

Coding Sequence: ATGCCGTATTTTTATCACAGTATATGTGTTAAAGCTTACATTACATCAACATTTACTTACGTTgtaattgtttcaaatttatttacagatACCGTTAAAGAAGACGTCCTGTCGACGACCCTATGTCCAATATGTTTGACGATCTTAACGAATCGTTCCGATTTGTTTATTCATTTGAGAACACACCATCAAAAGTACGCAACGCTTATGTGCGGATTATGCTTGCACGTTGCCACCTCATTTGTGGATCTCACAAGTCATTTAGGCTCTTGTAAGTCGCACCACGTCATTAATTCCAAGTTCATCTGTAAAATTTGTGCATATCACGATGACAATTCGAAGGTGGTCGAGAATCACATTCCCGTTCACAATTTTATATTGGAATTTTGCAAAAAGCAGTCAAAAATGTTCGATCCCTGCGATTATATAGAGATGAATAAAAAAGTAGAACATATAAAGACGCTGTTCTGTACGGATTGTAATCAAGGCGGTTTCGTTACTTTTAAAGAGTTTAGCATGCATCGACGTACTCAGCATCAAATATTTCATTGCGACTTGTGCAACAAGTTTTACGGACGCAATTCGCATTTGTGGAAACACGTTAATAGGGTGCACAAAGGACATCCCAGTATTACTTGCCAACTTTGTCACAAAACTAGCGCGTCCAAGTATCATCTGGCGCAGCATTTCAACAAAATCCACAGCGTCAAGTCGTCGAAGCGGAAGCACGACGGTAATACCGAAGACGACGAATTTATGGACCAAAAGTTTGAGGGTTTCGATTTCCAATCTGTACGCCAACGAGAAATTGTTCCACAAGGAGATAGACATTTGGCGTCCCTCAGTGACGACATGAATACAGATGCGGAAGACGATATCGAGAATTCGTCAAAAGTTTTAGTTAAAGCAGAAGTTAAATGTGAAATGGATATCGACTGCTCGGACTTGGAATTGTACGCTAACGAACTGGAAGATTCCGAAATGAAAATTGTTAACGTCGAAGACAAGCAGAAGGTCGAGGCGTCGATTTCACCTCCGAAAGAGATCGACTCGTCCAGTGATCTGTACACGAACATCATCACCAACTATACGCCTCCTCAAAATGAGGGCGAGTATAAGTGTCCCAAGTGTTTTAAAGGCTTTCATAAAAAGACGTTGTTGAAGaagcacaaaaaaaattgcagacctCGTTTACAAAAGGATTTATTAACACGTTGTAAAACTTGCTCTCGGATTTTTAAAGATAGACAGAGCCTAACGAAACATTTAATCAATTATCACTCAGAATACACTTGCGAAATTTGCGGACAGAAAGTACAGAGCAAGTGCGAAATTGTTTCTCACATTCGCTTCTCGCATCCCAATTGCCATTTGTTTTGTTATTGCGGAAACATTTTGCGTAGTCAATTTGATCTGACCGAACATAAGAAGGATCATCGCAATTCGTTTGTCTGTCAATTTTGCGCCGACCAGTTGCCCACAAAAATTAAGCTTAAAATGCACATTTTAAGTCTTCATCGTAAAATACTTAGTCTGAGTTGCGGCATCTGTCTCAAATTATTCGAAACGCAACACATTTTACGGGATCACGTCTGTTTGGTCCATAAAGGCGAACTGCTGCCTCTAACTTCCTGCACAGTTTGCGGTAAAAATTACGGCTCAAAGTGGAAGACTTACGATCACCTAAATAAATCGCACGGTCGTATATTTAAAGCGTGTAAGTCTTGCTTAGAGGTTTTCGATAACGAGCAACAGTTACAACAACATTTCGAATCGATTCACGTGAACCAGGTACCCACCAAAACCGCCGCACCGGTTACACCGAACTGGACGGAGCACGTGTACGACAGTGACGTCGATCACATTCaagaagaaaattttgaaaaaaaatcctcgAGCGAAGGATCGAACGACGCACAAAATTTTAATACCAGCGAAGAGGAAGAAATGGTGACCACAAATTTTCCCGATCTCTCTTTGGATAGACTATCTCTGTTAGAGAAGCGATTAATGGGTAATAAAAAGTCCGCAGACGAAGAAGTTAACATACCGAGCGTGATCACGTCTGGTAATCTGCCAATAAAAAAACTCACGAAAAAGTTGGAAACTTCCCACGCAAAGGCCAAggaaaagaaagtaaaattggAATCGgcgattattaaaaatgaacaagACCCTAATGAACAGAACCCGCTACAGAATAGTTCCAAACGGACCGTGTACGTCAACAGTAACGATCCGTCACTATgtgaaatatgtttaaaaacgTGGCCGGCAAAGAAACACCTTTGGCAGCATTACATTAGGTGTCACAAAACGGTTGCGGCGACCGTGTGCGGTATCTGCTTAAAAACTAATGAAGGTTATAAGTCGCTTCAAAGGCATCTTCGTGAGAATCATCCGACGCTCTTACACGGACAAGGCTTTGGATCTAATTTTATCTGTAGAATATGTGGGCGATATCACAACGCGAGTTCTAAATTGAGGCTCCACATGGCGATACACGAAAACTTTGATTGGACGATTTTAGAAAATATCGGTGGCGCACAGAACGGTTACGAGGTGCGAGACAAAAGATCTCAGCCAAACAACGGATACTTGGAAGTGTCTGAAAACGGCTATGCCATAATTAAAAACGAAGGTATTAACTACGAGAGCTTAATCGAACAAGTAGAATGTTCCTCAGATTCGGAAGGTAACGGAAATTTAAATTCGTCTTCGGAGGAGTCCGATAGCGAATCGGTACCGTCGACAAACGAGGAGGGGAACTCGTTTGAAAGCCAAATGGTACGTGACATGCTCGTGacggaacaaaaaaatttagacACGAAAGAGGAAATTAATTTGGACTATTCATCGTCCGTAAGTGGGGAAAGCGAATCTAACGATAGTACTTCGGATACGGATGGCGAAGTAATTAAAACCTCCGACGATAGCTCTCAGTTCTCGCGATCTTTGAAAAGTCCCAATATAGAAAGTGACGGTACTCTCGCCTTGTTAAGAAGATCGGACGAGTTAGATTCCGCCATTCGTTCTATTAGTTTTGAACCTATCGGTGAAGTTCGGGAACCGCTCTCCGTAGATATTTGTGACATACATCCTCAAGTTCTAAATCAACACGAAATTCAATCGGCCGTTGATAGTATTTTATAA
Protein Sequence: MPYFYHSICVKAYITSTFTYVVIVSNLFTDTVKEDVLSTTLCPICLTILTNRSDLFIHLRTHHQKYATLMCGLCLHVATSFVDLTSHLGSCKSHHVINSKFICKICAYHDDNSKVVENHIPVHNFILEFCKKQSKMFDPCDYIEMNKKVEHIKTLFCTDCNQGGFVTFKEFSMHRRTQHQIFHCDLCNKFYGRNSHLWKHVNRVHKGHPSITCQLCHKTSASKYHLAQHFNKIHSVKSSKRKHDGNTEDDEFMDQKFEGFDFQSVRQREIVPQGDRHLASLSDDMNTDAEDDIENSSKVLVKAEVKCEMDIDCSDLELYANELEDSEMKIVNVEDKQKVEASISPPKEIDSSSDLYTNIITNYTPPQNEGEYKCPKCFKGFHKKTLLKKHKKNCRPRLQKDLLTRCKTCSRIFKDRQSLTKHLINYHSEYTCEICGQKVQSKCEIVSHIRFSHPNCHLFCYCGNILRSQFDLTEHKKDHRNSFVCQFCADQLPTKIKLKMHILSLHRKILSLSCGICLKLFETQHILRDHVCLVHKGELLPLTSCTVCGKNYGSKWKTYDHLNKSHGRIFKACKSCLEVFDNEQQLQQHFESIHVNQVPTKTAAPVTPNWTEHVYDSDVDHIQEENFEKKSSSEGSNDAQNFNTSEEEEMVTTNFPDLSLDRLSLLEKRLMGNKKSADEEVNIPSVITSGNLPIKKLTKKLETSHAKAKEKKVKLESAIIKNEQDPNEQNPLQNSSKRTVYVNSNDPSLCEICLKTWPAKKHLWQHYIRCHKTVAATVCGICLKTNEGYKSLQRHLRENHPTLLHGQGFGSNFICRICGRYHNASSKLRLHMAIHENFDWTILENIGGAQNGYEVRDKRSQPNNGYLEVSENGYAIIKNEGINYESLIEQVECSSDSEGNGNLNSSSEESDSESVPSTNEEGNSFESQMVRDMLVTEQKNLDTKEEINLDYSSSVSGESESNDSTSDTDGEVIKTSDDSSQFSRSLKSPNIESDGTLALLRRSDELDSAIRSISFEPIGEVREPLSVDICDIHPQVLNQHEIQSAVDSIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -