Basic Information

Insect: Pyrocoelia pectoralis
Gene Symbol: -
Assembly: GCA_036250285.1
Location: CM070082.1:21697566-21699294[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 7.4 1.3e+03 1.5 0.7 3 21 226 246 224 248 0.78

2 9 0.00066 0.11 14.3 4.3 1 23 254 278 254 278 0.98

3 9 0.0021 0.36 12.7 2.3 1 23 284 309 284 309 0.94

4 9 0.011 1.9 10.4 1.6 1 23 315 339 315 339 0.96

5 9 0.00019 0.033 16.0 1.1 1 23 346 370 346 370 0.99

6 9 0.012 2.1 10.3 4.3 2 23 378 401 377 401 0.95

7 9 1e-05 0.0018 20.0 1.0 1 23 407 431 407 431 0.98

8 9 0.059 10 8.1 5.4 1 23 437 461 437 461 0.95

9 9 0.00063 0.11 14.4 0.9 1 23 467 490 467 490 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	7.4	1.3e+03	1.5	0.7	3	21	226	246	224	248	0.78
2	9	0.00066	0.11	14.3	4.3	1	23	254	278	254	278	0.98
3	9	0.0021	0.36	12.7	2.3	1	23	284	309	284	309	0.94
4	9	0.011	1.9	10.4	1.6	1	23	315	339	315	339	0.96
5	9	0.00019	0.033	16.0	1.1	1	23	346	370	346	370	0.99
6	9	0.012	2.1	10.3	4.3	2	23	378	401	377	401	0.95
7	9	1e-05	0.0018	20.0	1.0	1	23	407	431	407	431	0.98
8	9	0.059	10	8.1	5.4	1	23	437	461	437	461	0.95
9	9	0.00063	0.11	14.4	0.9	1	23	467	490	467	490	0.97

Sequence Information

Coding Sequence: ATGACTGCACCACTTAGTATTCACACAATTGATGTTCCAAGTTTTTTGGAGGATGGTCTAATTCCGAATGAAGATGACAACTGTACTTTCATACCCGATAACATTCCTGAGCAACCAGAAGACATTGTCGCCTGGTTAGATAAAGATGACAAAGCAATAGTATTAAGTGGTAACAGTATGATAAGCAATAAACCAGATCCATTACTCAATGATGTTAGTATACGGGATTCTCCcactttattaaatttaagtgatatCGATCCTGACCAATTAGGAGAAATGGGTAATATGGACATACTAGATACATCAACAGcggaaagtatttattttgaccAAAACTGCCAAACAGGTTGGAAGACGgataaaaatatgaattcaCTTACAAAGGATGGAAAGAATTTAGCACCAAATAAATGtgatattttagaaaaattagtCAAACATGGTTTAACCttagaagtaaaagaaattaataatagtTTACAAGTTCTATTAGAAAGTAGTGTCGATAAAAATGCATTTCCCAATCATTTTATACTTTTGAATGAACCAGGGCACATCAACCAGGCTATTGTTAGGCAGAAAGTAAGAACGTTAGAGAAAACGTCTGTGTCTTTGGATTTAGACATTCAGATGGCTTGTTTACATTGTCAGTTAGGATTACGTGTGTGGTTTTGCCCATTAGATATGTGCAGACGGGCCTTCTGCCGTTTAAATGTAGCAAAGCTTCATAGTCTACAGCACTTAAACCACAAAccttttaaatgtaattatccAAATTGTAAATGGGCATTTTATACTTCGTGTAAGTTAAAACGTCACCAAGACACACATAGCAAAAGGAAGGATTTTATTTGTTCGTACCCAGGTTGTGATCGTAGTTTTACAACTATTTATAATCTTAACTGCCACCGTCGATCTTCTCACGAATCACCTGCATCTTTTCCGTGTACAGTTAAAACATGtgataaaaaattccaaaatttacgTTCTCGAGAGTTACATTTAAAGACACACGGTGAAGAAGAGGCACCTTATAAGTGTCCTGTCTCCGATTGTGGAAAAGTTTTTTTCTTGTGTACTGGTTTATCATCTCATACACGTATCCATTCCCATAAGGAGTCCGAGCTACGCTGTCATTGGGCAAATTGTGGACGCGTTTTTCAACATCCATGTAGATTAAAACAGCACATTCTGCAACATACCGGACAACGCCCGTATACATGCACTTTTGATAAATGTAAGTGGGCTTTTCCAACTGCAAGTAAATTAAAAAGACATTTAAATTCTCATACTAATGAAAGAAAGTTTCATTGCACAATGGGGTCGTGTAATAAATCGTTTTTACGATCCCAGCATCTAAAAGATCACACTTTAACTCATATTGGTCATAGATCATTTCATTGTGATGAGTGTAACGTAAATTTTCCTGGCAAGTCAGAATTATATCTACATACGAAAACTGCCCATCCAAAGCCAGAAAAAGCTTGTGCACGGGCTGTTCCCTACAAATCACAAACATTAGAAACCTCAGGTACAGACAATCTTCTAGAAGAAGCAATACAGAGTCTTGATGTACCCTCTGATCTGATACTAAGCGGTAGTCTTCTACCTGATGAACCGTTACAATTGTTAGAAAATGAACATTTTTCTACAGTAAATTTACGTGATCTCGAATAG
Protein Sequence: MTAPLSIHTIDVPSFLEDGLIPNEDDNCTFIPDNIPEQPEDIVAWLDKDDKAIVLSGNSMISNKPDPLLNDVSIRDSPTLLNLSDIDPDQLGEMGNMDILDTSTAESIYFDQNCQTGWKTDKNMNSLTKDGKNLAPNKCDILEKLVKHGLTLEVKEINNSLQVLLESSVDKNAFPNHFILLNEPGHINQAIVRQKVRTLEKTSVSLDLDIQMACLHCQLGLRVWFCPLDMCRRAFCRLNVAKLHSLQHLNHKPFKCNYPNCKWAFYTSCKLKRHQDTHSKRKDFICSYPGCDRSFTTIYNLNCHRRSSHESPASFPCTVKTCDKKFQNLRSRELHLKTHGEEEAPYKCPVSDCGKVFFLCTGLSSHTRIHSHKESELRCHWANCGRVFQHPCRLKQHILQHTGQRPYTCTFDKCKWAFPTASKLKRHLNSHTNERKFHCTMGSCNKSFLRSQHLKDHTLTHIGHRSFHCDECNVNFPGKSELYLHTKTAHPKPEKACARAVPYKSQTLETSGTDNLLEEAIQSLDVPSDLILSGSLLPDEPLQLLENEHFSTVNLRDLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -