Ppec013196.1
Basic Information
- Insect
- Pyrocoelia pectoralis
- Gene Symbol
- zfy1
- Assembly
- GCA_036250285.1
- Location
- CM070075.1:51797888-51806632[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.5 2.6e+02 3.8 2.2 1 23 288 311 288 311 0.68 2 13 1.6e-05 0.0028 19.4 1.1 1 23 316 337 316 337 0.98 3 13 9e-05 0.016 17.0 0.5 1 23 343 365 343 365 0.98 4 13 1e-06 0.00018 23.1 0.3 1 23 371 393 371 393 0.98 5 13 0.019 3.4 9.7 0.2 1 23 399 421 399 421 0.96 6 13 1e-05 0.0018 20.0 1.1 1 23 434 456 434 456 0.98 7 13 0.018 3.2 9.8 2.5 1 23 461 483 461 483 0.95 8 13 0.019 3.3 9.7 2.4 2 23 496 517 495 517 0.96 9 13 4.1e-05 0.0071 18.1 2.7 1 22 522 543 522 543 0.96 10 13 0.0087 1.5 10.8 0.2 1 23 550 572 550 572 0.95 11 13 0.0017 0.29 13.0 1.8 1 23 578 600 578 600 0.97 12 13 4.5e-07 7.8e-05 24.3 0.1 1 23 606 628 606 628 0.99 13 13 1.3e-05 0.0022 19.7 1.4 1 23 634 657 634 657 0.97
Sequence Information
- Coding Sequence
- ATGTCGATATCAACAGTAATTTTGGAATGTTTTGGTTTAATGATTGATAAAGATGTAAATGTATCCAGTTATATTTGCTCTGCATGTGCGACAAAGGTACAAGACGCATACActtttaaaagtactattttaaaaGCAGAAAAAGTGATAACTGCACCATTGAAAATATTAGAATCCATTGATAACCAAGCAGAAACTGAAAATACACTGCGACCATTTCTCCCAACCTACAgaacagaagaagaagaagaagaagaaagaatccTCACATACATAACAACATTGAACGAAATAGAAACAAAAGAAGAAAGTGCAGTGTCACCTGTTCCTCCTATTTCGAACAATGTTCTAACTACACCATTAAAAGAAGAATCAAATTCAGTATCTGCATCTGTTCCAAAATTGGAAATAAATGTTAAATCTATTTTGGGAAAACTTCTAACTGCACCACTCACAAACAGAAGCAGGTCtcttaaaacgaaaaaaaataaaaacattaatgaTACACAAACAACAACTCTTGTGACAAGTTCAAAGTTAAAACCAAAAGTGAAACGTACTTATGGAAGAAGAAGGAATAAAAATGAACATGTACGGCCTAcactaaataatgaaataactttGTCGCCTTTGATGTCTGAGCACAGTTATAGTAAGTTAGTAGATGGCACATTTGTGAAAAGtactgaatcagaatatgaaaacGGTGAGAACTCTGTACCTCCAGATAATCTGGGTACCAAAGTGACCGAGGAGACACCAGTTACTGACAATGATGTAACGGCTGAGATTAAAAAGTATTCAATTAAACCTTTATCTAATTCCTTTGAAAAATGGTGGTTCAAAGGTTGTGGACCACCCTACCAGTGTAAATTGTGTGGACGTGATTATGGTGCAAGATATTCTGTATTTTATGCTCATGTTCGTACACATTTTATCAAGAAATTTCCTTGCACATATTGTGGTAAAAGATTTATTAATGACAAATTAAAAGTCCATATGAGGTCTCATACAAATGAGAGACCTTACGTATGTGAACAATGTCCGGCACGATTTATTTCAACAACAAGTTTGAAAAGGCATAGATTGTCTCATACAGGTGAAAAGCCATTTATTTGTGATGTGTGTGGAAAAGGATACAGCCAAAATTCTTCAATGCAAACGCATATGGAAACACACTATAAAACCACAGGCTATGTCTGTGAAATCTGTGGAGTAACCCTTAGAAATTATGGCGCCTATGGAAATCACAAAACAAAGCATAAAATGGATACTAGCAACAGTGAACATAATGCTAAATTCCCATGCAATCAATGTAACGCAGtttttagCAAATCTCAGTCTCTCACTAGACATTATAAGATTCATAATTATGGAGCTTTTAAATGTACAATATGTGATGCAtcttttacagaaagttatagtTGTGAAGTCCATACATTCATGCATGAGGTACAATCATACGAGACTGATTTAATGTCGCTTCATTGTAAATTTTGCTTTGATATTTTTAACGACAAAAAGAACTTGGAAGAACATTTGTTAACGCACCTCAGCAATCCGCATAAATGCAAGAATTGTAATAAATCATTTCctactaaattaaaattgagaGCTCATTTACGAAAATATAGTGATACAAAACCTTTCAGTTGCATTGATTGTGGAAAGGCGGTTAGAACATTAACAGCATTATATCTACACAGAAAAATTCACACGGGTACAAAGAAACATATATGTGAAGTGTGCAGTCGAGCATTTCTTCAACCACATCAATTAATGTATCATATGCTCACTCACACAggagaaaaaaaatatgtatgtcaATATTGCGGGAAGGCATTTGCTTTGAATGGAAATTTAACTGTGCATGTTAGACGTCACACAGGTGAAACACCATACCGTTGCAAAATATGTGATAAAGGGTTCTACGACAGTAGTAGTCGTACAAAACATATTGCATCGAAACATAGAAATGAAAACGTAAAAAACCAAGCTTCAGATAATTAG
- Protein Sequence
- MSISTVILECFGLMIDKDVNVSSYICSACATKVQDAYTFKSTILKAEKVITAPLKILESIDNQAETENTLRPFLPTYRTEEEEEEERILTYITTLNEIETKEESAVSPVPPISNNVLTTPLKEESNSVSASVPKLEINVKSILGKLLTAPLTNRSRSLKTKKNKNINDTQTTTLVTSSKLKPKVKRTYGRRRNKNEHVRPTLNNEITLSPLMSEHSYSKLVDGTFVKSTESEYENGENSVPPDNLGTKVTEETPVTDNDVTAEIKKYSIKPLSNSFEKWWFKGCGPPYQCKLCGRDYGARYSVFYAHVRTHFIKKFPCTYCGKRFINDKLKVHMRSHTNERPYVCEQCPARFISTTSLKRHRLSHTGEKPFICDVCGKGYSQNSSMQTHMETHYKTTGYVCEICGVTLRNYGAYGNHKTKHKMDTSNSEHNAKFPCNQCNAVFSKSQSLTRHYKIHNYGAFKCTICDASFTESYSCEVHTFMHEVQSYETDLMSLHCKFCFDIFNDKKNLEEHLLTHLSNPHKCKNCNKSFPTKLKLRAHLRKYSDTKPFSCIDCGKAVRTLTALYLHRKIHTGTKKHICEVCSRAFLQPHQLMYHMLTHTGEKKYVCQYCGKAFALNGNLTVHVRRHTGETPYRCKICDKGFYDSSSRTKHIASKHRNENVKNQASDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -