Ppec021900.1
Basic Information
- Insect
- Pyrocoelia pectoralis
- Gene Symbol
- ZFX
- Assembly
- GCA_036250285.1
- Location
- CM070077.1:19544561-19561591[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.0048 0.85 11.6 3.5 1 23 1182 1205 1182 1205 0.96 2 18 7.3e-06 0.0013 20.5 0.3 1 23 1283 1305 1283 1305 0.98 3 18 3.9e-05 0.0068 18.2 6.2 1 23 1311 1333 1311 1333 0.99 4 18 0.0041 0.72 11.8 0.2 1 23 1339 1361 1339 1361 0.97 5 18 0.00074 0.13 14.1 0.7 1 23 1374 1396 1374 1396 0.99 6 18 6.1e-05 0.011 17.5 1.0 1 23 1440 1462 1440 1462 0.99 7 18 0.032 5.6 9.0 1.9 1 23 1468 1489 1468 1489 0.96 8 18 0.00024 0.043 15.7 0.3 1 23 1495 1517 1495 1517 0.96 9 18 0.006 1 11.3 1.7 1 23 1523 1545 1523 1545 0.97 10 18 3.9 6.8e+02 2.4 1.4 2 20 1841 1859 1840 1860 0.92 11 18 0.046 8.1 8.5 3.9 1 20 1905 1924 1905 1927 0.95 12 18 1.2e-05 0.002 19.8 0.8 3 23 1936 1956 1935 1956 0.98 13 18 2.4e-06 0.00042 22.0 1.9 1 23 1962 1984 1962 1984 0.99 14 18 0.0021 0.36 12.7 1.0 1 23 1992 2014 1992 2014 0.97 15 18 0.0095 1.7 10.7 5.3 1 23 2020 2042 2020 2042 0.99 16 18 3.9e-05 0.0069 18.2 0.2 1 23 2182 2204 2182 2204 0.98 17 18 0.082 14 7.7 1.7 1 23 2210 2232 2210 2232 0.97 18 18 0.0096 1.7 10.6 3.0 1 23 2238 2261 2238 2261 0.96
Sequence Information
- Coding Sequence
- ATGTATCACAAGCTAACTTTACCTCGAAAGGTTTCTTTAGGCCCCTCGATGCCTACCTTACAAAATACCCTTCTCGGTTGGATTGTCGCTGGCGATCTGCCAAACACCCTAGGTTGTGGAGTTACGGCAGGTTGTTACCACACGACCGCCCAGAACGATGAACACAATACCGATTTGCATCAAGCACTGACCAAGTTTTGGGACTTGGATAATCCCAGGCCTATGTCAAGGTTATCTTTACTTTCGACACAGGAAAGATTTTGTGAGAATCACTTTCTCAACACTATTCAGTCGGACGAAACTGGTCGCCTTACCGTTTCGATCCctttcaattcaaaattattgctTCTCGGTGATTCCAAACAAATCGCCGAAACAAGGTTCCTCCACTTAGAGAAACGTCTTCACAGAGATCCCTGTTTCCTAAAGCAATATTCACAATTCATGTTGGAATACGAATCTCTGGGTCACATGACCAAAATTTCGGACGTTGAGAGCCATTCCTCTGCTGACGCTCAGGTCATAGAAACGCTTGATGGTCCTGTGAACATAACGGATATACCTCCGCAGTTTTTCCCCCATCACGCTGTTTTTAAGCAGTCTTCCTTGACTACGAAGTTGCGCGTCGTTTTCGATGCGAGCGCAACGACGTCCACAAATATCTCTGTTAACGACGCTCAGATTGTTGGCCCTCAAGTTCAAGACAATTTGTTTGATATCCTATTACGTTTTCGTGCACACGAGGTCGCTCTCTGTGGTGACATCGCCAAAATGTATCGCATGATCAATGTAGATCCTGCATCCCGTAGATTTCAGCATATCCTCTGGAGAGACAATCCCGAGAAACCCCTCAACATTTATAGATTGAATACAATCACTTACGGGACTGCTTCTGCTAGTTACCTAGCCACTCGCTGTCTGAATCATATTGCTGATTTACATAAGGATTCTTTCCCTGAGTCTGCTAaagttatattaaagaatttctATATGGACGACCTCTTATTCTCAACCGACTGTATTCAAGACGCCATTCGAATAAGGCAAGAAATGTCTTCTATACTATCTGCTGCTGGTCTGACGATACGGaagtttttatcaaataaaCAGGAAGTTTTAGCTTCGTCCAGCTCCGACGACGCCGAATTCTTCACCGTTCCCATTGGTGAACGGTCCGACTCTAAAACTCTAGGGCTCCATTGGGACTCTGAGAATGACCTTTTATTTTGTAAGGTCGATATTCCAAATGACAGCTCCCTTCCtactaaaaggaaaattttatctATTATCGCCAAGGTCTTCGATCCATTGGGTTTTTATTCTCCTCTCATCATTCTAGGGAAACTTCTAATTCAGAAGCTTTGGCAATCTGGTATTGCATGGGACGATCCCATCCCTTCCGAATTGATGTCCAAGTGGGCCGATTTTAAGGTGCAACTACATCATTTGAATGTGATCAAGATTCCTCGTTGCGTTATCCCGTCCTCTGCTGATCAGATTGAGCTACACGGGTTTTGCGACAGTAGCGCTACCGCGTATGGTTGCTGCTTCTATCTGCGCTGTTGCTCTGCGAATGGCAACGTGACTTGCACTCTGTTATTCTCCAAGGGCAAGGTTGCACCTCTGCACACAGTTTCCATTCCTCGTTTAGAGCTTTGCGCTGCCGTGTTATTGGCGGAATGGTGTGCTAAAGTCGCCAACATTTTCAATGTTCGCTTTCATAACATTTTCTTGTGGTCAGATTCCAAAATCGTTTTAAATTGGATCAATTCTGCCCCGAACAAATACAATATCTTCATTGCTAATCGCATTGCCGTCATACAGGAATGCACTAACATTCAACACTGGCACCATGTGTCAACCTCTAACAATCCAGCCGATTTAGTGTCACGCGGTTCCAGCATTTCGACCCTGAAGAATAACCGAACTTGGTTTCAGGGTCCTGATTTTCTCTTTCGCAATAACATCGGTTGTCTTTGCGATTTCATTCCCGATTCACATGAGACTACTGAGCTCAAAGGTACCGTTGTCCTGACTGCTACAAATTCGGCTGACAACTCCATTTTCGATAAATTTTCCTCTCTCGGAAAACTACAAAGAACTCTCGCTTATGTTCTACGTTTCAGTCATAACTGCCgaagtgcaaaaaaacgtatCGGCAATTTATCCGTCATCGAACTCCAGAGCTCTTTGACAGCGCTTACCAAGCTTTGTCAGGCTAATTCATTTGCTGACGAGATTAAGTCTCTCAAGAATAACGGAGTCATTAAGAACTCACGCATTCAGGCCCTCAATCCCTTTCTGGATGAGGCGGGTTGTCTACGCGTTGGTGGTAGACTAACCAATTCAGATTTTCCCTTTAACAAGAAACATCCGCTAATTCTTCCAAAGGAACACAGATTCACTGAACTTGTGATTTTGAATGGTCACAAAGAATTGTTGCACGGTGGCGCGCAACTCCTGCTAGCTCATATCCGAGAGCGTTTTTGGCCCATTGGGGGGCTGTGCCACATTAAAAGGCTTCTACGAAGATGTGTACCTTGTTTTAAGGCTCGCCCCGTAGTCAAGCATCCGCTCATGGGTAGTTTGCCTGAAACTCGGTTGGAAACGGTATATCCATTTTACAATGTTGGCTTAGATTACGCCGGCCCTATTGGTGTAAAGGACAGAAGCACACGCGGGGCACGAATATCAAAGGCATACATATGCGTGTTCATTTGTATGGTCACTCGTGCCATACATTTGGAATTAGTCACTTCCTTGTCTACGGACGCCTTCCTGAATTGTTTGAAGCGATTCACATCGCGCAGAGGTATGCCAAGCTGTATATCTAGCGATAACGCCACTAACTTTCGTGGCGCTAAAACAAAGTTAGACTCTTTATACTCCATCTTACACGGGGAAGAGTCGAATAAAACTgtggttaattttttaaattcaaaatcgattaaGTGGCAGTTTATTAATCCTCGCTCTCCACATGAAGGTGGTATTTGGGAGAGTGCGGTTAAATCTGTTAAAACCCATTTAAAACGCATTCTGGGTAATGCAAACCTCACATTTGAACATTTATATACTACTTTGACCATGATCGAAGCAAGCTTAAATTCGAGACCACTGTCAATCCTTTCTTCTGATCCTGACGACCTTGTCCCTCTCTCCCCTGGACACTTCTTAGTGGGTCGACCATTGGCTGCAGTGCCCGACCACAATTACCTGCCGGTACGAGAGAACAGGCTTTCCATCTTCCAAAGAGCGCAACTGCTGGCTCAACATTTTTGGAGGCGCTGGAAACGTGAAGTCGTGCCAGAACTTCAAAGACGGCAAAAATGGAGCAGGAATATTCCTGATCTTCTCCACATCAATTCCATCGTGCTATTGCAGGACGACGACCTTCCACCTCTTCAGTGGCGCCTAGGCGTAGTAACTGGGCTACATCGCGGTGCTGACAATGTGCTTCGTGCAGCCTCAATAAGGTTACCAGGTAATTTAAGAGTTCACTTTCAAAAGACACACATGATGCCTGTATCGGGAGCGAAAGTCTATCAATGTTCAATGTGCACGTGTATTTTTAAAACGGTATCTTCTTTAAACACACATACGACAAAGGTACACGCGCGCGACAGAAATTGGGACGATTTATCCGATTTAGTTACACAATTGAAAAGGTTAGATAAAGAGTTAGTATTAAGCAACGAGGACCATAGAATTGCGCTTGAAACACTTACTGACGGAAACGATAATGGTTCAGATcttataaaatatgtaaaactgGTTGATTATAGTGTCGAAGGATCTTTTCGTCGATACTtggtaaagaaaagaaaaatgggTAATCATCAATGGTATATCTGTTCTTTTTGTGCAAAGGAGTTTAAAAAACCTTCCGATTTGATTCGTCATATTAGGGTACATACACGTGAAAAGCCATTTAAGTGCAAACATTGTGATCAAGCATTCTCGTTAAAATCCACATTAACACATCACCTTAATACTCATTTGGCGAAAAAACAGTATCAGTGTATTGTTTGTTTAAAAGCTTTTGCATCAATGAGTGCATTAAATGTGCATCGTAGGCGTCATGATCGAAATTCGggaaaacataaaacttatcaCAGATACAAGTGTCCACTTTGtgccaaaatttttaattccaGTTCTATAATGAAATTACATATGAAAACTCATGGTGACGAAAAGCTCCCTAATCCTGCACTGGATGTTATAATGCAAGAACCAATGGTCGAAACTGCAAATGGATTGCTGCCACTTTCAGCACCACAACCAAATAAAGTAGAAATAGACAAACCGAGACCTTATAAATGTTCAGTGTGTGTATCATCTTTTATCAGACCAATTCATCTTAAACGTCACATGCTTATTCACACAGGTGACAAAAGATTTAATTGTGATATATGTAAAAAATCTTTTTATCCGACATATGCAAAAGAGCACATGAAATTTCATAGCGGAGAACGCAATTACGTTTGTAAAGTATGTGGTAAAAAATTTGTTACCAATGCCATTTTAAAGCGACATTCATTAATTCATAATTCTTCAAGGCCTTATATATGTCCTTATTGCCGAAAACCATTTAAAACTGTTGTAATGTGTCGTAAACATATTAATATACATAAACGAGACCTTGCAATAGAGCAATTACGAATAGATAAGGACATTATGCAGAATGTGGATCAAACAATTTCACTCACCTCTTCCAATGATATTTCCAAAAATGGGAATAAAATTTCTAATCTTTCGAAGATATTGTACACGGACACAGAAAAGGGAATTATTATCTCAACACCAATTGATGTTAAGAATGAGAACGTAACAGACAATTTGCATGAAGCTTTGGAACAACCTATTTTGTATCCGACATCTCCACCATTTGCAAATAAAGCTAGAAATGCATCACTGCTCTCTAACAATGGATCAACGAACATTTTGGAAAACATTGATGAAAGTGTTACAAATCTAAGTCAAGAAAGTTTAACAGACGCTGTTGACTGTAATTTTCAAACTGTGTACGTTAATCCTGATGATATACAGTCGTTTACAACAGCTAATCTATACAATGCCTGTTTATCACAATTAAAAAATAACGACCCACTACTGTTAAGCGGAATAAACGAAATTCAAGATCCCAATCTTTTATTCTCGACCGATCCTACTTTAAGCCAAATTACCGATTCTCAATTAGATACGCAAAATTTGGAAACTTTGTTACCGACATTTAGCGTCAATAATGTATTCCCTAATATTGTGTTATCAACGGACGATTACGTCGACATAAATCATTTACCTTTATTTGCCAGTATAAACGATTCCAGTAAAAAGGTGCAAACAAATGATCAAAAGTTTGTTATCGATTCAAACCTTATCGAATTAACTGATGATGCTATAGTCGGTAATCCGGTTATATCAAACTTGTTACCTAATGCACCTTCCTTGGAAGGTTCTTTTGATACTGTCGATTCAGTCGATAGAAATAATACAATCGTGAACCAGCTCGACTTGTCGTGCTCTTCgtgtaaaaaaagtttaaatgatCTTATTGATTTCAAAAGTCACGTTTGTCCTGATAAAGAAGGTAACGAcaaagtgaaaataaaaaaaagaactgGTATCAACAAGAAGGTAGAACCGAAAAAAAGTGTGCGACATTATACAgaggaggaggaatatgttgaCGAGGAGGAAAATCCCAAATATAAGTGTACATTTTGTGATAAAGTTTTATCAAACAAATTGATGTACACACGCCATTTATTGTGTCATACAGCAGCTAAAGAGAGAAATATATGTTCTTATTGCAGTAAAGAATTCAAGAAGCCTTCAGATATGGTTAGACATATAAGAACACACACCGGCGAAAGACCATTTAAGTGTGAGAAATGTGGGAAAAGATTCTCTCTGAAATCGACACTGGAATCACATGGTAGAACACATCAACCCGGTGGTAATAAGGATTTCAGTTGCGCTGTTTGTAGTTCATACTTCAGTTCAAAATCTAGTTTAAAAGTTCATACGTTAATGCACACAGGTGTACGACCATATTCGTGTCATCTTTGTCCAGATAAATTTCGCACATCAGCTCACAGAAAGTCTCATATACGAactcattttaaaacaaatgatTCAAAAAAGAACGGGCAGtccaaaacttcaaaaataaaactgcTGCAATCCATGACTTTGGACACACGATGTTTGGACGAAAAAACTCCTAAAGAAGATACTTCTTCTCAACTGAATGCTaagGCGGAAAGCCCCAAAGAATCAATAGAAATGGCCTTTGAAGAACCTAGTCAAGGACAGATAGTAGAAATCGATCCTATTTTTTTACACCAACTACAGTTAAATGGTATATTAATGCACGAAAATATAAATGAAGAACTAACATCTCTCATACAAGTCGATGTTAGTAATTGCGAAATAACAAATGTGAAAAGCATTTCAAACGAAAGGAATAATGTTGCCACGCAAAGTGCACTTCAAAATCATAATAATGTCAAAGATAAAGTGGCAGATTTAAAATATTACGAATGCGAAATTTGTGGTAAACGCTACGTCGCTAAAGCTGCATTAACAAAACACAAAAAGATACATGTAACGAACGATAATTTCAAATGTACAAAGTGTGGTGATACGCATTCGTCAAAGGAGGAATTAGAAAGTCACTTAATGTTACATTCAGGGTATCGACCATATTGTTGTCTATTATGTGCAAATACCTTTAGagaggaaaaaaatttaaaaactcacATGCGAAGaATTCATGGTGTGTAG
- Protein Sequence
- MYHKLTLPRKVSLGPSMPTLQNTLLGWIVAGDLPNTLGCGVTAGCYHTTAQNDEHNTDLHQALTKFWDLDNPRPMSRLSLLSTQERFCENHFLNTIQSDETGRLTVSIPFNSKLLLLGDSKQIAETRFLHLEKRLHRDPCFLKQYSQFMLEYESLGHMTKISDVESHSSADAQVIETLDGPVNITDIPPQFFPHHAVFKQSSLTTKLRVVFDASATTSTNISVNDAQIVGPQVQDNLFDILLRFRAHEVALCGDIAKMYRMINVDPASRRFQHILWRDNPEKPLNIYRLNTITYGTASASYLATRCLNHIADLHKDSFPESAKVILKNFYMDDLLFSTDCIQDAIRIRQEMSSILSAAGLTIRKFLSNKQEVLASSSSDDAEFFTVPIGERSDSKTLGLHWDSENDLLFCKVDIPNDSSLPTKRKILSIIAKVFDPLGFYSPLIILGKLLIQKLWQSGIAWDDPIPSELMSKWADFKVQLHHLNVIKIPRCVIPSSADQIELHGFCDSSATAYGCCFYLRCCSANGNVTCTLLFSKGKVAPLHTVSIPRLELCAAVLLAEWCAKVANIFNVRFHNIFLWSDSKIVLNWINSAPNKYNIFIANRIAVIQECTNIQHWHHVSTSNNPADLVSRGSSISTLKNNRTWFQGPDFLFRNNIGCLCDFIPDSHETTELKGTVVLTATNSADNSIFDKFSSLGKLQRTLAYVLRFSHNCRSAKKRIGNLSVIELQSSLTALTKLCQANSFADEIKSLKNNGVIKNSRIQALNPFLDEAGCLRVGGRLTNSDFPFNKKHPLILPKEHRFTELVILNGHKELLHGGAQLLLAHIRERFWPIGGLCHIKRLLRRCVPCFKARPVVKHPLMGSLPETRLETVYPFYNVGLDYAGPIGVKDRSTRGARISKAYICVFICMVTRAIHLELVTSLSTDAFLNCLKRFTSRRGMPSCISSDNATNFRGAKTKLDSLYSILHGEESNKTVVNFLNSKSIKWQFINPRSPHEGGIWESAVKSVKTHLKRILGNANLTFEHLYTTLTMIEASLNSRPLSILSSDPDDLVPLSPGHFLVGRPLAAVPDHNYLPVRENRLSIFQRAQLLAQHFWRRWKREVVPELQRRQKWSRNIPDLLHINSIVLLQDDDLPPLQWRLGVVTGLHRGADNVLRAASIRLPGNLRVHFQKTHMMPVSGAKVYQCSMCTCIFKTVSSLNTHTTKVHARDRNWDDLSDLVTQLKRLDKELVLSNEDHRIALETLTDGNDNGSDLIKYVKLVDYSVEGSFRRYLVKKRKMGNHQWYICSFCAKEFKKPSDLIRHIRVHTREKPFKCKHCDQAFSLKSTLTHHLNTHLAKKQYQCIVCLKAFASMSALNVHRRRHDRNSGKHKTYHRYKCPLCAKIFNSSSIMKLHMKTHGDEKLPNPALDVIMQEPMVETANGLLPLSAPQPNKVEIDKPRPYKCSVCVSSFIRPIHLKRHMLIHTGDKRFNCDICKKSFYPTYAKEHMKFHSGERNYVCKVCGKKFVTNAILKRHSLIHNSSRPYICPYCRKPFKTVVMCRKHINIHKRDLAIEQLRIDKDIMQNVDQTISLTSSNDISKNGNKISNLSKILYTDTEKGIIISTPIDVKNENVTDNLHEALEQPILYPTSPPFANKARNASLLSNNGSTNILENIDESVTNLSQESLTDAVDCNFQTVYVNPDDIQSFTTANLYNACLSQLKNNDPLLLSGINEIQDPNLLFSTDPTLSQITDSQLDTQNLETLLPTFSVNNVFPNIVLSTDDYVDINHLPLFASINDSSKKVQTNDQKFVIDSNLIELTDDAIVGNPVISNLLPNAPSLEGSFDTVDSVDRNNTIVNQLDLSCSSCKKSLNDLIDFKSHVCPDKEGNDKVKIKKRTGINKKVEPKKSVRHYTEEEEYVDEEENPKYKCTFCDKVLSNKLMYTRHLLCHTAAKERNICSYCSKEFKKPSDMVRHIRTHTGERPFKCEKCGKRFSLKSTLESHGRTHQPGGNKDFSCAVCSSYFSSKSSLKVHTLMHTGVRPYSCHLCPDKFRTSAHRKSHIRTHFKTNDSKKNGQSKTSKIKLLQSMTLDTRCLDEKTPKEDTSSQLNAKAESPKESIEMAFEEPSQGQIVEIDPIFLHQLQLNGILMHENINEELTSLIQVDVSNCEITNVKSISNERNNVATQSALQNHNNVKDKVADLKYYECEICGKRYVAKAALTKHKKIHVTNDNFKCTKCGDTHSSKEELESHLMLHSGYRPYCCLLCANTFREEKNLKTHMRRIHGV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -