Basic Information

Insect: Pyrocoelia pectoralis
Gene Symbol: -
Assembly: GCA_036250285.1
Location: CM070077.1:48089405-48094634[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.013 2.3 10.2 2.4 1 23 79 102 79 102 0.97

2 27 0.098 17 7.5 0.1 1 23 121 143 121 143 0.97

3 27 0.0018 0.32 12.9 0.1 2 23 150 172 149 172 0.94

4 27 0.037 6.4 8.8 0.9 2 23 178 199 177 200 0.93

5 27 0.0068 1.2 11.1 1.5 1 23 205 228 205 228 0.96

6 27 0.0019 0.33 12.9 0.8 1 23 233 255 233 255 0.96

7 27 0.015 2.7 10.0 0.2 1 23 289 311 289 311 0.96

8 27 0.0029 0.5 12.3 0.3 2 23 318 340 317 340 0.94

9 27 0.03 5.2 9.1 0.8 2 23 346 367 345 368 0.94

10 27 0.015 2.7 10.0 0.3 1 23 373 396 373 396 0.96

11 27 0.0022 0.38 12.7 0.5 2 23 402 424 401 424 0.95

12 27 0.0087 1.5 10.8 1.6 1 21 429 449 429 453 0.92

13 27 0.0095 1.7 10.7 2.2 1 23 491 514 491 514 0.97

14 27 3.1 5.3e+02 2.8 4.4 1 23 519 542 519 542 0.96

15 27 0.00055 0.096 14.5 2.2 2 23 548 569 547 569 0.97

16 27 0.00025 0.044 15.6 0.3 1 23 574 596 574 596 0.96

17 27 0.13 22 7.1 4.1 1 23 618 641 618 641 0.95

18 27 0.005 0.87 11.5 0.6 2 23 661 682 660 682 0.95

19 27 0.013 2.3 10.2 0.9 2 23 689 710 688 711 0.92

20 27 0.013 2.3 10.2 0.3 1 23 716 738 716 738 0.98

21 27 0.016 2.8 10.0 1.4 2 23 745 767 744 767 0.94

22 27 0.015 2.7 10.0 1.9 2 23 773 794 772 795 0.94

23 27 0.0078 1.4 10.9 1.0 1 23 800 823 800 823 0.97

24 27 0.0014 0.24 13.3 1.0 1 23 828 850 828 850 0.97

25 27 0.039 6.9 8.7 0.6 2 23 857 879 856 879 0.94

26 27 0.003 0.52 12.2 1.0 1 23 884 907 884 907 0.97

27 27 0.0043 0.75 11.7 0.1 1 21 912 932 912 933 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.013	2.3	10.2	2.4	1	23	79	102	79	102	0.97
2	27	0.098	17	7.5	0.1	1	23	121	143	121	143	0.97
3	27	0.0018	0.32	12.9	0.1	2	23	150	172	149	172	0.94
4	27	0.037	6.4	8.8	0.9	2	23	178	199	177	200	0.93
5	27	0.0068	1.2	11.1	1.5	1	23	205	228	205	228	0.96
6	27	0.0019	0.33	12.9	0.8	1	23	233	255	233	255	0.96
7	27	0.015	2.7	10.0	0.2	1	23	289	311	289	311	0.96
8	27	0.0029	0.5	12.3	0.3	2	23	318	340	317	340	0.94
9	27	0.03	5.2	9.1	0.8	2	23	346	367	345	368	0.94
10	27	0.015	2.7	10.0	0.3	1	23	373	396	373	396	0.96
11	27	0.0022	0.38	12.7	0.5	2	23	402	424	401	424	0.95
12	27	0.0087	1.5	10.8	1.6	1	21	429	449	429	453	0.92
13	27	0.0095	1.7	10.7	2.2	1	23	491	514	491	514	0.97
14	27	3.1	5.3e+02	2.8	4.4	1	23	519	542	519	542	0.96
15	27	0.00055	0.096	14.5	2.2	2	23	548	569	547	569	0.97
16	27	0.00025	0.044	15.6	0.3	1	23	574	596	574	596	0.96
17	27	0.13	22	7.1	4.1	1	23	618	641	618	641	0.95
18	27	0.005	0.87	11.5	0.6	2	23	661	682	660	682	0.95
19	27	0.013	2.3	10.2	0.9	2	23	689	710	688	711	0.92
20	27	0.013	2.3	10.2	0.3	1	23	716	738	716	738	0.98
21	27	0.016	2.8	10.0	1.4	2	23	745	767	744	767	0.94
22	27	0.015	2.7	10.0	1.9	2	23	773	794	772	795	0.94
23	27	0.0078	1.4	10.9	1.0	1	23	800	823	800	823	0.97
24	27	0.0014	0.24	13.3	1.0	1	23	828	850	828	850	0.97
25	27	0.039	6.9	8.7	0.6	2	23	857	879	856	879	0.94
26	27	0.003	0.52	12.2	1.0	1	23	884	907	884	907	0.97
27	27	0.0043	0.75	11.7	0.1	1	21	912	932	912	933	0.95

Sequence Information

Coding Sequence: ATGTGTAATAAAGGTGATACAGTATCCCCTTTaataaaaagtgaagaaaatgtaGATGTAAATAATACAGAAGTTGTCGACATAATTAAAGTTGAACCAAAATATGAAGAAGAAATCAATTTATCTCTCACAGAGCAGAATTTTTCGCTAAACTGTGACGGTGTTAATGTAAAGCAAGAACGTGTTGCTAAGGACTGTGAAACCCATATAAATGGTTGTCACGGTTTACCTAAGTTCAAGTGTCATCAATGTGACTATGTGACAAGGTGGAAAGTCACTTTAACTCAGCATCTAAATGTTTACCACGGTTCAAATGAATCTCCAGCCCAACATCTAAATGGTCGTCACGGTTTATCTCAATTCAAGTGTGATCAATGTTACTATGTGACAAGGTGGGAAGCCGCTTTAACTTGGCATCTAAGAGGTCACACCGGttcaaatgaattaaaatgtgaCCAGTGCGACTACATAGCAAGATCGAAATCATCTTTAGTACAACATATAAATGGTCTTCACGTTTTATCTAAATTGATGTGTGATCAATGTAACTATGTGACAAGGTGGAAAAGCGCTTTAACTCAGCATCTAAATGGTCACCACGGTTCAATTAAGTTTAAATGCAATCAGTGCAACTACCTAGCAACATCCAAATCGTTTCTAACCCAACATATAAATGGTCGTCACGGTTTATCGGAATTCAGGTGTGATCAATGTGACTATGTGACAAGGTGGAAAAGCTCTTTAACTCGGCATCTAAGTGGCCACACTGGttcaaatgaattaaaatgtgaGCAGTACAACTACATAGCAAAATCGAAATCGTCTTTAGACCGACATTTAGGTGCTCATCACTGCTTATCTCAATTCAAATGTGATCAATGTGACTATGCGACAAGGTGGAGAGCCGCTTTAACTCGGCATCTAAGCGGTCACACCGGttcaaatgaattaaaatgtgaCCAGTGCAACTATATAGCAAAATCGAAATCGTCTCTAGTACAACATATAAATGGTCGTCACGGTTTATCTAAATTGACGTGTGATCTATGTAACTATGTGACAAGGTGGAAAAGCGCTTTAACTCAGCATCTAAATGGTCACCACGGTTCAATTAAGTTTAAATGCGATCAGTGCAACTACCTAGCAACATCCAAATGGTCTCTAGCCCAACATATAAATGGTCGTCACGGTTTATCGGAATTACAGTGTGATCAATGTGACTATGTGACAAAGTGGAAAAGCTCTTTAACTCGCCATATAAGTGTTCGCCACGGTTCAATTGAGTTCAAATGTGATAAGTGTGGCTATGTAACAAAGTGGAAAGGCAATTTAATCAAACATGTGAATGCTTGCCGCCATAGTTCAGAGCAGGATTTTTCGCTAAACTGTGACGGTGTTAATGTAAAGCAAGAAGTAGGTGTTGCTAAGGACTGTGAAACCCATATAAATGTAACTCACAATTGGAATGAATACAAATGCGGTCATTGTAACTACACGGCAAAGTTAAAGTCCGTTCTACGCAATCATGTAAATCGTTTGCACGGTTCATCTGAATTTTCTTGCGGTCATTGTAGATTTAAGACAAAGTATAGACAGCGTATCAAAAATCATATGGAAAGAGCGCATATTTTGACTCAACTTAAATGTACGCTTTGTGAGTATAAATGTAGCAACAGGGACAGTTTTGCCAGACATATGATAATTCATATTTCgaagaaatataaatgtaatcAATGTGACTATGTAACAAAATTGAAGTCTAACCTAGCTATTCATGTTAGTGCTCATTACAAAGCAAAATCGAAATCGTTCCTAGTCCAACATATAAATGGTCGTCACGATTTATCTAAATTCAAGTGTCATCAATGTGACTATGTGACAAGGTGGAAAGTCACTTTAAATCAGCATCTAAATGGTTGCCACGGTTCAAATGAATCTCCAGCCCAACATCTAAATGGTCGTCACGGTTTATCTCAATTGAAGTGTGATCAATGTGACTATGTGACAAGGTGGAAAAGTTCTTTAACTCGGCATCTAAGTGGCCACACGGGttcaaatgaattaaaatgtgaGCAGTGCAACTACATAGCTAAATCGAAATCGTCTCTAGACCGTCATTTAGGTGCTCATCACGGCTTATCTCAATTCAAATGTGATCAATGTGACTATACGACAAGGTGGAGAGCCGCTTTAATTTGGCATCTAAGCCGTCACACCGGttcaaatgaattaaaatgtgaGCAGTGCAACTATATAGCAAAATCGAAATCGTGTCTAGTACAACATATAAATGGTCGTCACGTTTTATCTAAATTGAAGTGTGATCAATGTAACTATGTGACAAGGTGGAAAAGCGGTTTAACTCAGCATCTAAATAGTCATCACAGTTCAATTAAGTTTAAATGCGATCAGTGCAACTACCTAGCAGCATCCAAATCGTTTCTAACCCAACATATAAATAGTCGTCACGGTTTATCGGAATTCAAGTGTGATCAATGTGACTATGTGACAAAGTGGAAAAGCTCTTTAACTCGGCATCTAAGTGGCCACACCGGttcaaatgaattaaaatgtgaGCAGTGCAACTACATAGCACAATCGAAATCGTTTCTAACCCAACATATAAATGGTCGTCACGGTTTATCGGAATTCAAGTGTGATCAATGTGACTATGTGACAAAGTGGAAAAACTCTTTAACTCGCCATATAAGTGTTCGCCACAGTTCAATTGAGTTCAAATGTGATAAGTGTGGCTATGTAACAAAGTGGAAAGGCAATTTAATCAAACATGTGAATGCTTGCCGCCGTAGTTCAGTTGAATTTTGA
Protein Sequence: MCNKGDTVSPLIKSEENVDVNNTEVVDIIKVEPKYEEEINLSLTEQNFSLNCDGVNVKQERVAKDCETHINGCHGLPKFKCHQCDYVTRWKVTLTQHLNVYHGSNESPAQHLNGRHGLSQFKCDQCYYVTRWEAALTWHLRGHTGSNELKCDQCDYIARSKSSLVQHINGLHVLSKLMCDQCNYVTRWKSALTQHLNGHHGSIKFKCNQCNYLATSKSFLTQHINGRHGLSEFRCDQCDYVTRWKSSLTRHLSGHTGSNELKCEQYNYIAKSKSSLDRHLGAHHCLSQFKCDQCDYATRWRAALTRHLSGHTGSNELKCDQCNYIAKSKSSLVQHINGRHGLSKLTCDLCNYVTRWKSALTQHLNGHHGSIKFKCDQCNYLATSKWSLAQHINGRHGLSELQCDQCDYVTKWKSSLTRHISVRHGSIEFKCDKCGYVTKWKGNLIKHVNACRHSSEQDFSLNCDGVNVKQEVGVAKDCETHINVTHNWNEYKCGHCNYTAKLKSVLRNHVNRLHGSSEFSCGHCRFKTKYRQRIKNHMERAHILTQLKCTLCEYKCSNRDSFARHMIIHISKKYKCNQCDYVTKLKSNLAIHVSAHYKAKSKSFLVQHINGRHDLSKFKCHQCDYVTRWKVTLNQHLNGCHGSNESPAQHLNGRHGLSQLKCDQCDYVTRWKSSLTRHLSGHTGSNELKCEQCNYIAKSKSSLDRHLGAHHGLSQFKCDQCDYTTRWRAALIWHLSRHTGSNELKCEQCNYIAKSKSCLVQHINGRHVLSKLKCDQCNYVTRWKSGLTQHLNSHHSSIKFKCDQCNYLAASKSFLTQHINSRHGLSEFKCDQCDYVTKWKSSLTRHLSGHTGSNELKCEQCNYIAQSKSFLTQHINGRHGLSEFKCDQCDYVTKWKNSLTRHISVRHSSIEFKCDKCGYVTKWKGNLIKHVNACRRSSVEF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -