Basic Information

Insect: Pyrocoelia pectoralis
Gene Symbol: -
Assembly: GCA_036250285.1
Location: CM070074.1:3367090-3369028[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00079 0.14 14.1 0.1 2 23 185 206 184 206 0.97

2 12 1.7e-07 3e-05 25.6 1.2 1 23 212 234 212 234 0.97

3 12 8.9e-07 0.00016 23.3 0.2 1 23 247 270 247 270 0.95

4 12 6.3e-06 0.0011 20.7 1.1 1 23 280 302 280 302 0.99

5 12 3.7e-05 0.0064 18.2 2.9 2 23 309 330 308 330 0.96

6 12 5.5e-09 9.7e-07 30.3 1.0 1 23 336 358 336 358 0.98

7 12 3.5e-06 0.00061 21.5 0.5 1 23 364 386 364 386 0.97

8 12 7.1e-06 0.0012 20.5 1.0 1 23 392 414 392 414 0.98

9 12 5.9e-05 0.01 17.6 1.6 1 23 420 442 420 442 0.98

10 12 7.9e-05 0.014 17.2 0.8 1 23 448 470 448 470 0.97

11 12 0.00011 0.019 16.7 0.5 1 23 476 498 476 498 0.99

12 12 8.9e-05 0.016 17.0 0.8 1 21 504 524 504 525 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00079	0.14	14.1	0.1	2	23	185	206	184	206	0.97
2	12	1.7e-07	3e-05	25.6	1.2	1	23	212	234	212	234	0.97
3	12	8.9e-07	0.00016	23.3	0.2	1	23	247	270	247	270	0.95
4	12	6.3e-06	0.0011	20.7	1.1	1	23	280	302	280	302	0.99
5	12	3.7e-05	0.0064	18.2	2.9	2	23	309	330	308	330	0.96
6	12	5.5e-09	9.7e-07	30.3	1.0	1	23	336	358	336	358	0.98
7	12	3.5e-06	0.00061	21.5	0.5	1	23	364	386	364	386	0.97
8	12	7.1e-06	0.0012	20.5	1.0	1	23	392	414	392	414	0.98
9	12	5.9e-05	0.01	17.6	1.6	1	23	420	442	420	442	0.98
10	12	7.9e-05	0.014	17.2	0.8	1	23	448	470	448	470	0.97
11	12	0.00011	0.019	16.7	0.5	1	23	476	498	476	498	0.99
12	12	8.9e-05	0.016	17.0	0.8	1	21	504	524	504	525	0.93

Sequence Information

Coding Sequence: ATGAAATTGGACAAAATCTGTAGAACATGTTTAGCCGAAAAAACTCCACTAAAATCAATCTTCAGCGCTTGTTTACCTAATATGTTAATGACAATTGCTTCTGTTCAGGTACTCGATGGAGACGGTTTACCAAATCAAATATGCACCCAGTGCTTACAAATGATTAATCGTACCTACACATTTAAGCAGCAGTGCGAAAAATCGGATGCTACCTTACgtgaatatttaaacaaaattaattttcaaagtaTAAGCTTAAGTAGTGATCATAATCTCATGTGTAATGTAAAAAATGATCAGCTATTTGGTAATAGTGAGGTATTACAGCAAACGTCACTTTTCACCGAAATATTTGGAAGCGAAACTACTCATTCATTAGTCGACAATTTCGCATCTACTGGTTCAAACACTGATTTCGCAGATACCATGCAAAGCTTGCAGACTATTGCCGAACAATGTCTCCCGGAAGCGTGGGAGAATGACAATTTAATTGCAACACATAGTAGTTCCGAAGAAACAACTTGTCACAGTTTAAACTTAGAACCGTATTTGAAATGCCAGTTTTGTGAGCTTTCTTATAGTGACGAATGGAGTTTGGCTGAGCATATTAAAATACACACAGGACAGTCTAAGtatttttgtactttgtgtGACAAAGTATTTACAACTTCCTCCGCACTTACTAAGCACATTACAAGTCACAACCTATTATCAGTTACTGTCGATCAGAACAAAATCTTTGCTTGTGACATTTGTGGTAAACAGTTTAGCAACACAGCATTGTTGAAAGCGCACATGAAGGAATCACATTCCAATATTAAAAACGCAGAGAAAAGTTATGTTTGTCAAATATGTGATAAGCGCTATTCACAAAATAAGTTTTTGGTGTTACATTTACGATCACATACCGGTGAAAGACCGTTACATTGTGGAACTTGTGGAAAGAGTTTTTCGTTACCGAGCTCGTTGCATAAACACAGACTGGTTCATAATCATGAAAGGAAATTCAGCTGTACTTTATGTGGGAAATCTTTTAAGCAAATGTCTAACTTAACAGCTCACATGCGAATTCACACAGgtGAGAAATCTTTCATCTGTACAGTTTGTGGCAAGGGTTGTGCGACAAACGTTAATTTGAGTATTCACATGCGTTTACACACAGGTGAAAAACCGTACATGTGCAGCCAGTGTGATGCCGCTTTTACCACTAATGGTCAGTTAAAGAAACATTTCATGCGTCATACAGGTGAAAAACCTTACAAATGTTGGCAGTGTGGAAAAGCATTTCGTCAAAAAGATACACGTGATACTCATGTAAGGTATCACACTGGCGAAAGACCTTTCGCTTGCCAGTTATGTTCTAAGAAATACATAGCAGCAAGTCACTTACGAattcatATGAGAGGGCACACTGGTGATCGTAAATACCAATGTAATTTATGCCCAAAAGCATTTCTACAAGCTCGTACTTTAAAAACTCATTTAGACACacataataatgaaaaagtatATTTATGTAGTTACTGCGGTTTAACTTTTACTACTAAAACTGTGCTAAACAAACATAGGAAATTATGTGGTATATCACTGtag
Protein Sequence: MKLDKICRTCLAEKTPLKSIFSACLPNMLMTIASVQVLDGDGLPNQICTQCLQMINRTYTFKQQCEKSDATLREYLNKINFQSISLSSDHNLMCNVKNDQLFGNSEVLQQTSLFTEIFGSETTHSLVDNFASTGSNTDFADTMQSLQTIAEQCLPEAWENDNLIATHSSSEETTCHSLNLEPYLKCQFCELSYSDEWSLAEHIKIHTGQSKYFCTLCDKVFTTSSALTKHITSHNLLSVTVDQNKIFACDICGKQFSNTALLKAHMKESHSNIKNAEKSYVCQICDKRYSQNKFLVLHLRSHTGERPLHCGTCGKSFSLPSSLHKHRLVHNHERKFSCTLCGKSFKQMSNLTAHMRIHTGEKSFICTVCGKGCATNVNLSIHMRLHTGEKPYMCSQCDAAFTTNGQLKKHFMRHTGEKPYKCWQCGKAFRQKDTRDTHVRYHTGERPFACQLCSKKYIAASHLRIHMRGHTGDRKYQCNLCPKAFLQARTLKTHLDTHNNEKVYLCSYCGLTFTTKTVLNKHRKLCGISL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01518343;
90% Identity: -
80% Identity: -