Ppec024411.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pyrocoelia pectoralis
Gene Symbol
ZNF536
Assembly
GCA_036250285.1
Location
CM070078.1:3002908-3004605[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 3.5e-08 6.2e-06 27.7 0.8 1 23 214 236 214 236 0.99
2 12 7.8e-07 0.00014 23.5 7.4 1 23 242 264 242 264 0.98
3 12 8.4e-05 0.015 17.1 0.4 1 23 270 292 270 292 0.99
4 12 8.3e-05 0.015 17.1 1.7 1 23 298 320 298 320 0.96
5 12 0.00023 0.041 15.7 1.3 1 23 326 348 326 348 0.97
6 12 4.4e-07 7.8e-05 24.3 3.6 2 23 355 376 354 376 0.97
7 12 1.2e-07 2e-05 26.1 1.9 1 23 381 403 381 403 0.98
8 12 1.2e-06 0.00021 22.9 2.3 1 23 409 431 409 431 0.99
9 12 5.6e-06 0.00099 20.8 1.3 1 23 436 458 436 458 0.96
10 12 5.3e-07 9.3e-05 24.0 2.0 1 23 464 486 464 486 0.98
11 12 6e-09 1.1e-06 30.2 1.3 1 23 492 514 492 514 0.98
12 12 5.3e-07 9.3e-05 24.0 1.0 1 23 520 542 520 542 0.99

Sequence Information

Coding Sequence
atgaataatgTTTTTCATTACGCCGATTGTTGTCGTGCCTGCCTAAAAATTGAAGGTTCTTTAACGTCAACTTCGACTGTTGACACAGACACCATTAAATTAAGTGATAAATTAATATCTTGTATTTCTGAAgttGCGTGGTTAAAGGAGAGTCTTCCATCTTTTATATGTACAACTTGCGTTGATAAGTTACGACTCGCTTACGACTTCCGAATATTATGCCTCCAGTCAGATAATACTCTACAACAGTACTTCCATCAACATAAAACTATCAACGGAGAAATTTACAACAGTTTATCGGAATTTATTTTGCCAGAAGGTGCTAACGATATTACTAAAACGATACAAACTCAGTCGACGGGTTCAGATTATCTTAACCTGAAACACTTTCTCGATAACGAAGATTTATCACGATCTTCCAATCCTCCCGAACTGGATGCGTCACGTAGTGCCACACCGGATTCCGTTGCAACCACCGGTTTCGCCAGAATAGAAAAAATAACTAAGAAAGTTGTCAATACAAGATCGGTCAAGACTCAAACTCAACCTCTTCCTCAATATCCTTCACTTACTCCGGCCGCCGCGCGTCTGGAAGCCCAGCAGAGTAAAACAACGATAATTGTCGAAGACCCCTATAAGTATACGTGTAGCGTGTGTGGAAAAAAGTATGcgaaaaatgctaacctaaaaATTCACATGCGAACTCACACAGGTGAAAAACCTTTCGAATGTAAATATtgtgataaaaaattttatcattCGTCTCATTTGCGAGAACACATACGTAGGCATACCGGCGAGAAACCGTTCCAATGTAACGTTTGTATGAAGCGTTTCACGATTACAGCCGAATTAACCGTTCACATGCGTATACACACCGGCGAAAAACCCTACGCTTGCAATTGTTGCGAGAAACGTTATATAAAAGCATCAGATTTGCAGGTACATATGCGCACACACACCGGCGAGAAACCCTTTGCGTGTTCGTATTGTGACAAGAAGTTTACAAGTGGCTACATACTCAACTCGCATTTAAAGACTCATACAGGCGACCGCCCGTGGTCCTGTACTCTGTGTAGTAAGTCATTCACGCAAAGCTCCCATTTAACGGTTCATATGAAGAAACATACGGGAGAGAAATTTTCCTGCAAAGTTTGCGGGCAAGAATTTACTCACTCGTCTCAACTTACGGTTCACATGCGTGAACATACGGGCAAACAACCTTATAAGTGtacaatttgtgataaaatttgtaattacgCCTCGGAGTTACAGACGCATATGATGAAACATACGGGTGAGAAATTTACCTGCATAACGTGTGATAAAAAGTTTACGACATCGGCATATTTACAAGAACACATACGTACACATACTGGCGAAAATTTATTCAGTTGTACATTATGTGAGCGAACCTTTACGCGTGCTACATATTTAGAAAAACACTTAAGAACGCATACGGGCGAGAAACCGTTTTCTTGCGAAGTTTGCGGGAAGAAATTTACTCAGTCGTCTTCCCTAAATGTCCATATGCGAAAACATACAGGTGAAAAACCGTACACTTGTACCATATGTAATCGTGGATTTGTAACGTCTTCTTATTTATCGGTGCATTTACGTAAACATAGAAAGTATATTAGTTTATAA
Protein Sequence
MNNVFHYADCCRACLKIEGSLTSTSTVDTDTIKLSDKLISCISEVAWLKESLPSFICTTCVDKLRLAYDFRILCLQSDNTLQQYFHQHKTINGEIYNSLSEFILPEGANDITKTIQTQSTGSDYLNLKHFLDNEDLSRSSNPPELDASRSATPDSVATTGFARIEKITKKVVNTRSVKTQTQPLPQYPSLTPAAARLEAQQSKTTIIVEDPYKYTCSVCGKKYAKNANLKIHMRTHTGEKPFECKYCDKKFYHSSHLREHIRRHTGEKPFQCNVCMKRFTITAELTVHMRIHTGEKPYACNCCEKRYIKASDLQVHMRTHTGEKPFACSYCDKKFTSGYILNSHLKTHTGDRPWSCTLCSKSFTQSSHLTVHMKKHTGEKFSCKVCGQEFTHSSQLTVHMREHTGKQPYKCTICDKICNYASELQTHMMKHTGEKFTCITCDKKFTTSAYLQEHIRTHTGENLFSCTLCERTFTRATYLEKHLRTHTGEKPFSCEVCGKKFTQSSSLNVHMRKHTGEKPYTCTICNRGFVTSSYLSVHLRKHRKYISL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00153727;
90% Identity
iTF_00399733;
80% Identity
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