Ppec011926.1
Basic Information
- Insect
- Pyrocoelia pectoralis
- Gene Symbol
- -
- Assembly
- GCA_036250285.1
- Location
- CM070075.1:44991499-44993331[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-06 0.00021 22.3 0.0 2 39 19 55 18 61 0.89
Sequence Information
- Coding Sequence
- ATGCCTAGAGATTATAAACCTAAAGTAGGGGGAAAACGTTACAAACAACATAATCCAGATATAATTCAAGATGCTAAGAATGATGTCATTCGTGGTTACAGCATTAGACAAGCTGCGAAAAGACACAATCTTGCTTACACCGTGCTTCAAAGACATATAAAAAATGAAGGTGTTAAGAAACAAGGAGGGCAAACAGTGTTGAGTGAAGCAGAAGAAACATCTATTGCCGAGAAATTACTCATATGCAGTGAATGGGGTTACCCCTTTGACACATTCGATTTAAGATTGCTTgttcaacaatatttaaatagaGCTGGTAGAGTTGTTTCCTGTTTTAAAGATAACCTTCCGGGTAAAGAGTTTGCATATAGCTTTTTAAAACGACATTCAAATATACTATCTGAAAGAATGTGTCAAAATATAAAACGGGCCCGTGCTGGTGTTACTAGGGAAACCATTACAGAATATTTTAGACATCTTTCTGAAGAATTAGAGGGTGTTCCAGCTAGCCACATCGTTAATTATGATGAAACAAACCTTTGTGATGACCCTGgtcgaaaaaaaattattgcaaggCGGGGATGTAAATATCCCGAACGGATTATAAACCATAGCAAATCGTCCACCTCAATCATGTTTGCTGCTTCTGGTAGTGGAGTATTACTGCCATGTTATGTAGTATACAAAGCCTTAAACATGTATGACTCTTGGACAACTGGAGGACCACCCCATACTAGGTATAATCGCAGCAAATCGGGATGGTTCGACAGTTATTGCTTCGAGGATTGGATGCAATCAATTGCCATTCCCTATTTGAAGAAGTTACCCGGCAAGAAGATATTAATAGGTGACAATTTATCGTCCCACCTTTCAGTTGAAGCAATAAAAGAGTGCTCCGAGAACAATAttcgtttcatatttttacCATCCAACTCCACGCATTTGACGCAACCATTAGATGTAGCTTTTTTCAAGCCATTGAAGACTGCATGGAGAAAACTAGTGGAATTGTATAAAAAGGGACCAGGAAGGAAGGAGGCTGGTATTGCCAAAAATGTCTTTCCCAGTTTATTGAAAAAGTTGCTTGAAGCTATTGAAGCAAACAGATCCAACAACATAATTGCTGGATTTGATAAATGCGGAATATTACCCTTGAATGCTGAGCGTGTGTTGCGCATGCTGCCTGTGGAACATACAGCTGTAAATGAAACTCAGGAAGATGACATCAACAACTCcgttgttaatattttaaagtcCATGAGGTATGATGAGAACAAGCCTACACAGCGAAAACGAAAAATTAACGTCCCTGCTGGTAAAAGTGTGGCAGTTGACGACATTGCATCTTCTGATGAAAGTAGCCAACATTTTAGCACTCACGATTCAAACTCAGATATGGACCCCATGTCTGAATATGAAGAAGAAAACGAAGAGCGTCTTGCTGGCGAAAATGAAGAGTTTTCTCATCCATCGCCAATTAACTCTAATATCCTGCTTTCTGTCAATAAGAAAGACATCAATATTGATGACTGGCTTCTTATAAATTTACCTTACACCGCTAAGGAGAATGGTGAAGGTGCATCCAGGTCCTCCAATAGATTTTTTATAGCACaagttttaaaactaaaaaaaaacagctACCAAGGAAATTTTTTACGCGAAAAAACGACTAGAGACTATTCTGGATACGTGTATAACTTTCCAGATGTAAAAGATGAATATGATTTTACATTCCAACAAATTGTAGGGAAACTACAAACTCCTGAAAGATATGGAAGAGGTCTatttagatttaaaattaatttatatgaaTACAACAAACAATTCAAATAG
- Protein Sequence
- MPRDYKPKVGGKRYKQHNPDIIQDAKNDVIRGYSIRQAAKRHNLAYTVLQRHIKNEGVKKQGGQTVLSEAEETSIAEKLLICSEWGYPFDTFDLRLLVQQYLNRAGRVVSCFKDNLPGKEFAYSFLKRHSNILSERMCQNIKRARAGVTRETITEYFRHLSEELEGVPASHIVNYDETNLCDDPGRKKIIARRGCKYPERIINHSKSSTSIMFAASGSGVLLPCYVVYKALNMYDSWTTGGPPHTRYNRSKSGWFDSYCFEDWMQSIAIPYLKKLPGKKILIGDNLSSHLSVEAIKECSENNIRFIFLPSNSTHLTQPLDVAFFKPLKTAWRKLVELYKKGPGRKEAGIAKNVFPSLLKKLLEAIEANRSNNIIAGFDKCGILPLNAERVLRMLPVEHTAVNETQEDDINNSVVNILKSMRYDENKPTQRKRKINVPAGKSVAVDDIASSDESSQHFSTHDSNSDMDPMSEYEEENEERLAGENEEFSHPSPINSNILLSVNKKDINIDDWLLINLPYTAKENGEGASRSSNRFFIAQVLKLKKNSYQGNFLREKTTRDYSGYVYNFPDVKDEYDFTFQQIVGKLQTPERYGRGLFRFKINLYEYNKQFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01284433; iTF_01284434; iTF_01284438; iTF_01284439; iTF_00067398; iTF_00067396; iTF_00067416;
- 90% Identity
- iTF_01284433; iTF_01284434; iTF_01284438; iTF_01284439;
- 80% Identity
- -