Ppec010628.1
Basic Information
- Insect
- Pyrocoelia pectoralis
- Gene Symbol
- -
- Assembly
- GCA_036250285.1
- Location
- CM070075.1:39755319-39757309[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.04 6.3 8.0 0.1 2 38 16 51 15 57 0.74 2 2 0.00027 0.042 14.9 0.1 2 38 286 322 285 326 0.93
Sequence Information
- Coding Sequence
- ATGCCGCGAAATCCAATAAGAAAAACTAATATAGGCATGTTTTCCCATGAACAAATGCAGATAGCAGTGGAAGCGGTCATAAATGTTCACAGCATCAGATCTGTAGCAAAAGAAGGATCCTTAAGTTTTCAGACTCTGGCTAGATacgtgaagaagaagaaagctgAAGAAAACGTTGTAATCAGATTCACTGCTAATTATAGCGTCAACAAAGTCTTTTCTGAAGCACAAGAAAATTCTTTAGCCCAGTACATGATCAGATGTTCTCAAATGTTCTACGGATTGCCCCTTGTTGACTGCAGGAAATTGGCATACGAAACGCCgttgagaaataatttgaaaatgccACCGTGTTGGCAAACAAATCAAACAGCTGGAAAGGAATGGATGAGAAATTTCTTGGGACGACATCCTCGCATTGCCCTAAGAACGCCTGAAGGATGTAGTTTGGCACGGGCTACGTCCTTCAATGAACATAACGTCAAGAAATTCTTTGATAATTTATGGAATGTAATGAGTCGTCATGACAGACTGGGTGACGGTACTCGTATTTTCAATCTGGACGAAACCGCGACGGTGACTGTTCAGAAATCAGCGAAGGTCTTAGCCGCGAAAGGTATCAAGCAGGTCAATAAAGTCGCCAGTGGTGAGAAAGGGACTTTAGTGACAACTTGCGCCATCGTCAGTGCTGCAGGAAATCAACTTCCGCCCGCGATGGTATTTCCACGTGTTCACTTTAAGGAACATATGACCATAAGAGCTCCACCCGGTACGCTGGGACTTGCAGCACCATCACGATGGATGAATTCCAAACTGGTCCTGCAAGTTAGGAAGACTGACAGAGCAACGATCGACgaggaaaatgttttaaaagctgttaaaaaagtactaaaacGACAATCTAGTCTGAGACCTGCTGCTATGGAATATAATTTATCCAAATCGATGCTACACAAGAGGGTCCAGATGGCAAAAGCAAACTTAAACAATAATGCAGTTGATATTACAGGAAGCAGTGACAGTGACTTGGGTGAATCTGACACAGAACCTTGTTTAAAGACCATTAAGTTAGTGGGTAAAGGAAAAAACCAGGCAAAGAAAGTATTCACTAACGAGCAAGAACTATTGATAGTAGATTACTTGTTGAAAGCTTCGAATCTACGTTATGGTTTCACTTACAAGAAAACGCAAGAACTTGGTTATGAGTATGCAAAGTTATTGAAACTGCCTTATCCTAAGCAGtgggataaaaataaaatggcagGAATAGATTGGATGAAGAGAATGATGAGAGACCATAAAAATTATCATTGA
- Protein Sequence
- MPRNPIRKTNIGMFSHEQMQIAVEAVINVHSIRSVAKEGSLSFQTLARYVKKKKAEENVVIRFTANYSVNKVFSEAQENSLAQYMIRCSQMFYGLPLVDCRKLAYETPLRNNLKMPPCWQTNQTAGKEWMRNFLGRHPRIALRTPEGCSLARATSFNEHNVKKFFDNLWNVMSRHDRLGDGTRIFNLDETATVTVQKSAKVLAAKGIKQVNKVASGEKGTLVTTCAIVSAAGNQLPPAMVFPRVHFKEHMTIRAPPGTLGLAAPSRWMNSKLVLQVRKTDRATIDEENVLKAVKKVLKRQSSLRPAAMEYNLSKSMLHKRVQMAKANLNNNAVDITGSSDSDLGESDTEPCLKTIKLVGKGKNQAKKVFTNEQELLIVDYLLKASNLRYGFTYKKTQELGYEYAKLLKLPYPKQWDKNKMAGIDWMKRMMRDHKNYH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -