Ppec008559.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pyrocoelia pectoralis
Gene Symbol
-
Assembly
GCA_036250285.1
Location
CM070075.1:28537456-28540119[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.4e-11 1e-08 36.1 0.0 2 41 29 68 28 71 0.94

Sequence Information

Coding Sequence
ATGGGTAAAGTTAACAAAGCTTTAGAGCAGAAAAAAAAGACTAAAAGCAAAAGTAGCATTAAACGTCCTATACACCAATATCGAGAGGAATCCTTACAAGATGCGCTTTTTCAAATTAGAGAAAATCAACTCAGTGCGAGAAAAGCCAGTCAAGTATATGGTGTGCCAAAAACCACTATCCTTGATAGATTAAGTGGAAGAGTTGCCGAACGCCCCAGAAAAATGGGCCCCCCACCTGTTTTAAGCATGGCAGAAGAAAAGGCCATAGTCCACTGGTGTATGAACTTATCTAAGTGTGGGTTTCCACGAAAGATGGATGACATACTGAACACTGTTCAGAAGATTATAATGTCGAAAAACAATGATATAAGAAATATTCCATTCGTAAACGGACGTCCTGGCATAAAATGGTATAAAGCTTTCTTTAGGCGTAACCCTGAACTGACGCATAGAAATGCTGAAAACTTATCACAAGGACGTGCAGTACTCACAGAAGAAAGTATCAGAAAATGGTTTCGTGAGTTAAAAGATTACGTAAAGGCTGAAGGGGCCGAGGATATTTTGTTAGACCCCACCAGGATTTTTAACGGAGACGAAACGAGCTTTACATTGTGCCCAAAGTCTGGAAAAATTGTAGCCCCCAGAGGCTACAAAAACGTATACCAGATAGTGAAGGGGAAGGAAAAAGAGGCATTGACAGTGTTACTTGTGGTATCTGCGAGTGGTGCCATTGCACATCCTTGTGTGGTATTCCCTTATGTACGGCCGCCAAAGGATGTTCGTGACAGTATGGATCCGTCTTGGTGTCTAGGATTAAGCGAAACAGGGTGGATGCGCTCAGAAGTATTTTATGAATATGTAGCCAATTCCTTGAATCCCTGGTTGGGTGCCCATAAAGTTAAGAAACCTGTGCTGTTTTTCATCGATGGCCATAAGAGCCATTTAACTCTAACCTTAAGTCAATTCTGCTCAGAAAATGGTATAATACTGTATGCCCTGCCGCCCAATGCTACCCACATTATGCAGCCGTGCGATGTCAGTGTTTTCAAACCTCTGAAATCGGAGTGGGTTGGAACAGTCCGCGAGTGGCAAATGcgtgaagaaaatttaaaccaaaCTTTAACTAAAGCGAGGTTTTGTccgcttttaaaaaaaatattagaaaaggaCAACTTGGCGCAAACTATTAAGAACGGTTTTCGTAAGTGCGGACTGTTTCCATTCGACCCAAATATGGTTGATTACTCTAAATGTGTTCAGAACATACTTGAAAAGTTGGAACGAACTGATGTAGGACCAGAGCAGATCTTCCAACCTGCAATTTGCGACTATAAGATCACTGAGCGGACGATAAAAACCATTCGAAATAATTTAGAGCAACGTGGTGTTAGAGTAGAGATAATTTTAGAAGAGTTATCTATAGCGCAAAACCGGTTTAACAAGGAAATTGCAGATGACATACTCCCAGTTCCTGAACAAGCTTTAGATGACGTACCTTTTGCTTTATTAGATGATGGTCAGTTGTATGACATTGATGCGACGGGTAACCTCATTCCTCAGGAGATGGAACATGCTTTGCCTCTACTCCCAGAAATTGAAAATGATGATACTAACATCTGTCTTGAGAATATCTCTAAAGAACCTGCTTCAGCCGATGAATTCCTCATTCCCACACAAGTTACTGAAGAGTTTAAAGATAAATCGGTTGGTGAAACCTCAGGCAGCAATATCACAATCCCTAAAGAACCTGCTTTAACCGATGAATTCCTCATTCCCACACAAGTTACTGAAGAGTTTGAAGATAAATCGGTTGGTGAAACCTCAGGCAATAATATCACAATCCCTAAAGAACCTGCTTTAACCGATGAATTCCTCATTCCCACACAAGTTACTGAAGAGTTTAAAGATAAATCGGTTGGTGAAACCTCAGGCAGCAATATCACAATCCCTAAAGAACCTGCTTTAACCGATGAATTCCTCATTCCCGCACAAGTTACTGAAGAATTTGAAGATAAATCGGTTGGTGAAACCCCAGGCAGTAGTATCACAATCCCTAAAGAACCTGCTTCAACCGATGAACTCGTTATTACCACACAAGTAACTGATGCTTCAGCCAGAAAAGTCAATATAATATCCAATATCACGATAATTCCTCCGTTGCAGACTTGCAACATTAACGAAATTCTGTTTTACCCTAAGCCAATTCAGAAAAGTAAGAAAACTAAAAGAACAACACAGCAACCGAGTGCTGTTTCATCTGAAATGTGGAGACGATTGGAAAAGGAGAAAGAAAATGCCaagcaaataaaaattgaaagtattAAGAAACGAAAATTAGAAGCAGAGAAAAAGAAAGAGGCGAAAAGAGTagcaaatgaagaaaaaaagataaattcaaaGAAAAGGAGACAAGTCAAGAAAACTAATCAACCCAAAAAACAGGAAGTTGAAGACCAGAGACCAAAGAGTCCATTGGAAAAAATTCCCATAAAATGCAACGCATGTGATGAAACTCTTATAAGTGACACAGAAGAtaacgatttaaaaaatatcggCTGTGATAAGTGTACTCGGTGGTACCACATGAAATGCTCTACTTTCAGTGGAAGTTTATATGAAGATGTTTTGGGTAAAGAATTTAACTGTGCTCATTGCACTATATAA
Protein Sequence
MGKVNKALEQKKKTKSKSSIKRPIHQYREESLQDALFQIRENQLSARKASQVYGVPKTTILDRLSGRVAERPRKMGPPPVLSMAEEKAIVHWCMNLSKCGFPRKMDDILNTVQKIIMSKNNDIRNIPFVNGRPGIKWYKAFFRRNPELTHRNAENLSQGRAVLTEESIRKWFRELKDYVKAEGAEDILLDPTRIFNGDETSFTLCPKSGKIVAPRGYKNVYQIVKGKEKEALTVLLVVSASGAIAHPCVVFPYVRPPKDVRDSMDPSWCLGLSETGWMRSEVFYEYVANSLNPWLGAHKVKKPVLFFIDGHKSHLTLTLSQFCSENGIILYALPPNATHIMQPCDVSVFKPLKSEWVGTVREWQMREENLNQTLTKARFCPLLKKILEKDNLAQTIKNGFRKCGLFPFDPNMVDYSKCVQNILEKLERTDVGPEQIFQPAICDYKITERTIKTIRNNLEQRGVRVEIILEELSIAQNRFNKEIADDILPVPEQALDDVPFALLDDGQLYDIDATGNLIPQEMEHALPLLPEIENDDTNICLENISKEPASADEFLIPTQVTEEFKDKSVGETSGSNITIPKEPALTDEFLIPTQVTEEFEDKSVGETSGNNITIPKEPALTDEFLIPTQVTEEFKDKSVGETSGSNITIPKEPALTDEFLIPAQVTEEFEDKSVGETPGSSITIPKEPASTDELVITTQVTDASARKVNIISNITIIPPLQTCNINEILFYPKPIQKSKKTKRTTQQPSAVSSEMWRRLEKEKENAKQIKIESIKKRKLEAEKKKEAKRVANEEKKINSKKRRQVKKTNQPKKQEVEDQRPKSPLEKIPIKCNACDETLISDTEDNDLKNIGCDKCTRWYHMKCSTFSGSLYEDVLGKEFNCAHCTI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01284231; iTF_01284238;
90% Identity
iTF_01284231; iTF_01284238;
80% Identity
iTF_01284238;