Ppec013100.1
Basic Information
- Insect
- Pyrocoelia pectoralis
- Gene Symbol
- -
- Assembly
- GCA_036250285.1
- Location
- CM070075.1:50998002-50998361[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-11 1.8e-09 38.5 0.1 3 37 17 51 16 56 0.94
Sequence Information
- Coding Sequence
- ATGGTACGAAAATACGCAAGAAAGACAACTCATCAAAATTGGTGTAAAGAATCAATGAAAGAAGCAGTACAGGCGATTATTGAGGGTACCATGGGTTATAAAAAAGCAGCGCAGCAATTTAAGGTGCCTCAGACCACATTAGAACGTTATGTTGCAAAAGCAAAAAGAGATGTGGGGTCAAAGTTTAACATAGCGCAATTAGGAAGCGCCAGAAATGTGTTTACCGAAGCTCAAGAGTTAGAGATtgtgaaatatgtaaaagacATGGGATCAAGATTATTCGGCTTTACAATGAGAGAGttaagaaaatttgtttatCAATTGGCGGTCGTAAACGGTGTTGCAAACAGGTTTAGTTAA
- Protein Sequence
- MVRKYARKTTHQNWCKESMKEAVQAIIEGTMGYKKAAQQFKVPQTTLERYVAKAKRDVGSKFNIAQLGSARNVFTEAQELEIVKYVKDMGSRLFGFTMRELRKFVYQLAVVNGVANRFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01105583;
- 90% Identity
- iTF_00020135; iTF_00020138; iTF_01105583;
- 80% Identity
- -