Ppec009214.1
Basic Information
- Insect
- Pyrocoelia pectoralis
- Gene Symbol
- -
- Assembly
- GCA_036250285.1
- Location
- CM070075.1:34237944-34238704[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8e-11 9.3e-09 36.3 0.0 2 39 17 55 16 59 0.92 2 2 4.3 6.8e+02 1.5 0.1 12 22 103 114 100 117 0.78
Sequence Information
- Coding Sequence
- ATGCCTACCGAATATAAACGCAAGTGTCCAGGGCGTGGCAGTTGGACTACAGAACAGCTGGTTCAAGCTTTAGAAGCAATAAATTGCGGTAATATGGGCGTCAATGAAGCTTCTCGGCAATTCGGTATTCCTTCTAGAACTCTACGAAGAAGacgtttgcaaaataatgcgaGAAAAACTGGATTATCTATGTTCGGCAAAACAAATGAAATagctttaaaaattaaacacaaatttAATTCTGAAACCGAAAAAGCTGGCTACGATTGCATTAACAGTTTCTTACGTAGAAATCCAATGCTAAGCGTACGCAAATCAGAAGGAATGTCCTTAGCTAGAGCTACGGAGAGAAagagtaaatatttatttcgatTTGTTGAGATCAGTTCcagaagaaaatttgaaaagccTTCTCACGTGTTTAATATGGACGAGTCAGGATTGCAAATTAACAATAATCCATCGTATGTAATTGCCACTAAGGAGTCCAAGCAAGTGTCATCGATAACGTCAGTGGAACGAGGAGAAACCGTTACTATATTTGCATGTTGTAATGCCGAAGGACACTTTTTAGCTCCCACCTGTATTATGAAGGGAAAGTACAGTAAAAAAGAATACGAAGACGGAATGCCCCCAGGTTCATCTATTTATATGTCTGCCAAATCAGCGTAG
- Protein Sequence
- MPTEYKRKCPGRGSWTTEQLVQALEAINCGNMGVNEASRQFGIPSRTLRRRRLQNNARKTGLSMFGKTNEIALKIKHKFNSETEKAGYDCINSFLRRNPMLSVRKSEGMSLARATERKSKYLFRFVEISSRRKFEKPSHVFNMDESGLQINNNPSYVIATKESKQVSSITSVERGETVTIFACCNAEGHFLAPTCIMKGKYSKKEYEDGMPPGSSIYMSAKSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -