Basic Information

Insect: Pyrocoelia pectoralis
Gene Symbol: -
Assembly: GCA_036250285.1
Location: CM070075.1:45309364-45322367[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 8.2e-13 1.3e-10 42.2 0.0 4 38 569 603 566 607 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	8.2e-13	1.3e-10	42.2	0.0	4	38	569	603	566	607	0.91

Sequence Information

Coding Sequence: ATGTACATCCTGATAACGAGGGATCGCGTTCATATTAGAAATCCAAATAATTTGACACAGCAAGAACTGGAACTTATTGCGCGGGCGATTTGCGAGGAGTCAGAGGAGGAAATCGTTGGAGGTTCTGATGACGATGCTTCAGATGAAAATATTGCTGTAAGTGAACATAATACGAGTTCTGAAGAGGAAGCCGAAGACAGCGACAGTGAAATAATACAACCCGATATACCACCGACCAGGGAACCATGTTTTTTTGGTAGAGATGCTGAAACTGTGTGGAGGAAACATCCCGCAAAAACAATTCGTTTTGATGACAAAACCAGCAGGGAAGAAAGAAGGCAAACAGATAAACTCACTCCAATTAGAATAATTTTGGACACCTTTATATCTAATTGCAGAAATAATTACGTGCTTGGAGAATATATGACTATCGATGAGATGCTAATACCATACAGGGGTCGATGCAGCTTTATCCAGTACATTCCCAATAAACCGGCCAAGTATGGTCTAAAAATGTTCGCATTGTGCGACTCAAAGACATTTTATGTTGCCAATCTGGAATTGTACTGTGGCAAACAACCTGATGGCCCCTACGTACAATCAAATACTCCTTCTGAAGTAGTGTTCAGcaTAGACCGAACAGGAATACCTCAACGTTCAGAGATAGATGATCTAGAATTACCTGAATTAGATATGGAATTTGAAGATTTGCCAGAAATATCACACAATTTATATGGAAGACGCATAATAAATATTAACCATTTGTGGCAAGGTTTAATGCGACTGAAGCATCCTGGTTTCGGATGTAACTTTTACGACCTCCACATTACTTCTGAAAAGCGTAGTGGTCTTTCAAGCACATTCTACGTAAAGTGCCAGGTATGTAACTACGAAAGTAGCTTCTCAACACACTCAAACAGAGGAAGCTATACGCAGTTATCAGAGCTATTGGCCTCGATGGATGTACCATATATGTCGCCGCACACATTTGCCTCGCATGAAGAAAAAGTCCAACCCATCATCAAAAAAACCATTCTTGACGAGATGGTGCAAGCCGGAAAAGAAGAAGCAACTCTAGCAATTGAAAACAGAGATGTTGATGACGACGGTATTCCAGTAATTATCACAATTGTAGATGGTGCTTGGAGTAAGCGATCATATAAAACTAATTACAACGCTTCTTCTGGGGTCACATGCATTATTGGAGCACAAACCAAAAAAATACTGTACGTAGGTGTGAAGAATAAATTTTGCAGAGCATATCAGAAGCAAAATAAGGATAAGGAGAACGTTACACTGAACAATcacaaatgtttcaaaaattggAGTGGAACATCAACCTCGATGGAATCGGCAATAATTTTAGACGGTTTAAAAACTTCCTTAGATACCCACGGCGTTAAATATGGTAAAATTATTGGGGACGGTGACAGTAGTGTGACTAAAAACATTCGTGTCGACAAACCATATGGGCCAAACTTTTTTGTCGAGCAAATCGAATGCCGTAAGTGTGAAGAAGAAAACTTATATCAGTTACTTGTAGAAAGCAGCATTATTGACGAATTTGATAGAATAATTCATAGAATCGCTAACCATGCGGCCAGTTTGTTAATCAATTCTCATACAAACGCCGCAGAGAGTTTTAACAGCCAGATGCCTAGAATTTGGAAACGAACCACTGAAAAGGCGCAATGGACTTCAAAAGATATGTCCAATGCAGTCAAAGATGTGACTAATGGTATTAGTCAAAGAAAAGCAGCGTCAAAGTATGGGATTCCTTTCAGTACATTTCAACAAAGATTTAAGAACCTACGACAAGGAGGTCCTAGCATGGGTAGAAAGTCCGTTTTCTCCAAAGTTCAAGAAGCTGAAATAGCTGCCCATGTCAAAACATTGGCAAATATGTTTTATGGGCTAAAACACGATTACTTCCATCTTTGTATCAAAGGTGCTCCTCGATATGAGGAATTAATAAATGTTGGTGGCAGTTTAGCAAATCCTTCAGATAGTATACCGCAATACATAAATGTGCTAATGGAAAATAAGCTGATTGAGGCAAATAGTATTGAAACCTTGTTGTATTCATTGGACAACCACAATTTTTGCGATCTAATTGGTGTGGAACACCAATCATCAATACCTCCCCAAGGTGATACAATACAAGAAAGTGCAGAAAGTGGACTTTATTGGGGCGAGGAAGCAACCAAACTCATGCTGGATAAGTACGAAAATTATCTTCCTCTGTGCGAAAACCGTTATAAAACGATTATGAAGAGGAAGAAAAATATTATAAGACATAATAAGAGGACAGGAGAATCGCCTCAAGCTGACCCATATGAAGAGGAACTCTCTAGAATTGCTGCTATTGACGATAGCATTGAACCAGCTGTCAAAATTGGTGTGGGAAAATGTGTCGTCATTAATAAATTGAACTCCACCGAACCAATAGCAATCCCTTCTACATCTTCATCTCCTTCAGGGTCTCCTACAGTTACACCAAGTGGAACTTTGAAAAAGAAACGACTGGCCGATGTTATGTTAGAGATATCCAAAAATAAGGAGGAAGGTCGTGAGCGAAGACATAAAGAGAAGTTAGAGTTACTACGTGTAATGTCAGAAAAATTATTTGGTTCAGAGACATGA
Protein Sequence: MYILITRDRVHIRNPNNLTQQELELIARAICEESEEEIVGGSDDDASDENIAVSEHNTSSEEEAEDSDSEIIQPDIPPTREPCFFGRDAETVWRKHPAKTIRFDDKTSREERRQTDKLTPIRIILDTFISNCRNNYVLGEYMTIDEMLIPYRGRCSFIQYIPNKPAKYGLKMFALCDSKTFYVANLELYCGKQPDGPYVQSNTPSEVVFSIDRTGIPQRSEIDDLELPELDMEFEDLPEISHNLYGRRIININHLWQGLMRLKHPGFGCNFYDLHITSEKRSGLSSTFYVKCQVCNYESSFSTHSNRGSYTQLSELLASMDVPYMSPHTFASHEEKVQPIIKKTILDEMVQAGKEEATLAIENRDVDDDGIPVIITIVDGAWSKRSYKTNYNASSGVTCIIGAQTKKILYVGVKNKFCRAYQKQNKDKENVTLNNHKCFKNWSGTSTSMESAIILDGLKTSLDTHGVKYGKIIGDGDSSVTKNIRVDKPYGPNFFVEQIECRKCEEENLYQLLVESSIIDEFDRIIHRIANHAASLLINSHTNAAESFNSQMPRIWKRTTEKAQWTSKDMSNAVKDVTNGISQRKAASKYGIPFSTFQQRFKNLRQGGPSMGRKSVFSKVQEAEIAAHVKTLANMFYGLKHDYFHLCIKGAPRYEELINVGGSLANPSDSIPQYINVLMENKLIEANSIETLLYSLDNHNFCDLIGVEHQSSIPPQGDTIQESAESGLYWGEEATKLMLDKYENYLPLCENRYKTIMKRKKNIIRHNKRTGESPQADPYEEELSRIAAIDDSIEPAVKIGVGKCVVINKLNSTEPIAIPSTSSSPSGSPTVTPSGTLKKKRLADVMLEISKNKEEGRERRHKEKLELLRVMSEKLFGSET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -