Ppec027725.1
Basic Information
- Insect
- Pyrocoelia pectoralis
- Gene Symbol
- bab2
- Assembly
- GCA_036250285.1
- Location
- CM070079.1:801231-815331[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.7e-11 1.1e-08 36.1 0.0 1 39 372 411 372 415 0.90 2 4 5.9e-12 9.3e-10 39.4 0.1 1 39 426 464 426 468 0.95 3 4 3.2e-16 5.1e-14 53.1 0.0 1 45 481 526 481 526 0.97 4 4 2.1e-15 3.3e-13 50.5 0.0 1 40 533 573 533 577 0.93
Sequence Information
- Coding Sequence
- ATGTCTGGGCAGCATTATTGTCTAAGATGGAACAATTATCAAAGTAATATGACATCGGTATTTCACCAGCTTTTACAAAATGAGGCGTTCGTGGATGTTACATTAGCATGTAAGGATGTATCTTTGAAGGCGCATAAAGTAGTTCTCTCGGCGTGCTCCtcgtatttccaaaaattattgtTAGAAAATCCTTGTAAACATCCTACAATAATAATGCCGCAGGATGTGTGCTATGACGACCTCAAGTTTATCATCGAATTCGTATACAAAGGAGAAATCGACGTTTCTCAAGCAGAATTACAGTCCCTTTTAAAAACCGCCGatcaattgaaaattaagggCCTCTGTGAATCGGACGAAAAGGGAAGTTCAACCTCTCCCGTTTTTATACCCAGATGTTACCCCAACATTTCTAAGATATCTTCACCAATACACTACAGACAGTTAGATAACAACAAGAGGCATAGTATTCAAGAATTTGATGCAAATAATTTCTCAGACAAGGACGAAGATGTTAAAGAATCTATATTAGATGAACATGTTTCTGATTATGATAGTGATGTACCTTTAATTGTTGATGAGGGACCAAAGCGGAAAAAATTAACGCAATCTCAATCGAAACCTATTAACATGAGCAGTCATGGCCTTTTGGCGGGACAGGCTCTGTTCTCCCAGTTGTGCGATAATGATGACTTTCCACCTGAACCACCAGCTCCAAGTGCTACTCCAGTGGGCCACGTTGACCTGCAAGAACATTCACCAACGCGTACACTTCTACAATCATCACATCGAACAGATTTATCAGACGTTCACATAAAGTATGAAGACATTAAAAAAGAGACAACGATAAAGTTTGAAACTTTACGATCGTATGACCATGACTCCATGATGGATATGGACGCATCTCATATGTCTGGGCCTGATCATTCTATGGAAAGTCATGAAGATGCGGAGCGAGCGATGCATTCCATGATGGTCACGCCCGAGCTAATGAGTATAATGCCAGGAGGATCGGGACGCCTAGATATATCGAACGGtgataatcaaaataaaagcaACGGACACTCGGACCACTTAACTAGTAGGTCACACGGTGGGGGGCCCAAAACGTGGACTCAAGAAGATATGGAATTAGCTTTAGATGCCTTAAGAAATCACAATATGAGCCTAACTAAAGCTTCGGCGACTTATGGTATTCCCTCCACTACACTCTGGCAAAGAGCACATAGATTAGGTATAGATACTCCCAAAAAAGAAGGCCCTACAAAATCATGGacggaagaaaatttgaattcggcGCTCGAAGCTTTAAGGACTGGTACAATATCAGCAAATAAAGCTAGTAAAGCGTACGGTATTCCTAGTAGCACATTGTATAAAATAGCTAGAAGGGAAGGAATTAAATTAGCGGCTCCGTTTAACGCGGCTCCTACAACATGGTCGCCTGAAGATTTAGAGAAGGCGTTAGAGTCTATTAGATCTGGCCAGTCGTCTGTTCAAAAGGCGTCAACGGAATTTGGCATTCCTACCGGTACGTTATATGGACGGTGTAAAAGGGAAGGTATTGAATTGTCAAGATCAAATCCCACACCGTGGTCGGAGGATGCAATGGGGGAGGCGTTAGAGGCAGTAAGattAGGACACATGTCGATTAATCAAGCAGCCATACACTATAATTTACCCTACTCCTCGTTATATGGAAGATTTAAAAGAGGAATAAAATATGAATCTGAAAATATAGATTCGAATAATTCTGATAGTCAATCACATTCAGATTCTCAAATACTTGTAATGGATTATCCAAATTCACACCAACAAATTCAGTACCAACATCATTCGAATAGCTGA
- Protein Sequence
- MSGQHYCLRWNNYQSNMTSVFHQLLQNEAFVDVTLACKDVSLKAHKVVLSACSSYFQKLLLENPCKHPTIIMPQDVCYDDLKFIIEFVYKGEIDVSQAELQSLLKTADQLKIKGLCESDEKGSSTSPVFIPRCYPNISKISSPIHYRQLDNNKRHSIQEFDANNFSDKDEDVKESILDEHVSDYDSDVPLIVDEGPKRKKLTQSQSKPINMSSHGLLAGQALFSQLCDNDDFPPEPPAPSATPVGHVDLQEHSPTRTLLQSSHRTDLSDVHIKYEDIKKETTIKFETLRSYDHDSMMDMDASHMSGPDHSMESHEDAERAMHSMMVTPELMSIMPGGSGRLDISNGDNQNKSNGHSDHLTSRSHGGGPKTWTQEDMELALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIKLAAPFNAAPTTWSPEDLEKALESIRSGQSSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYESENIDSNNSDSQSHSDSQILVMDYPNSHQQIQYQHHSNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00003877;
- 90% Identity
- iTF_01284853;
- 80% Identity
- iTF_01284853;