Pser001602.1
Basic Information
- Insect
- Pyrochroa serraticornis
- Gene Symbol
- stc_1
- Assembly
- GCA_905333025.1
- Location
- HG995158.1:14692426-14697764[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 1.6 1.8e+04 -3.8 0.8 15 18 305 308 304 309 0.78 2 16 2 2.2e+04 -4.7 3.4 6 10 335 339 332 339 0.69 3 16 0.19 2.1e+03 -0.8 0.4 4 10 365 371 364 371 0.93 4 16 1.7e-05 0.19 12.1 14.1 4 18 380 394 378 395 0.93 5 16 4.2e-08 0.00047 20.4 14.3 1 18 431 448 431 449 0.98 6 16 4.4e-08 0.00049 20.4 15.9 1 19 489 507 489 507 0.97 7 16 1.6e-06 0.018 15.4 14.6 4 19 554 569 547 569 0.87 8 16 0.79 8.8e+03 -2.8 0.3 8 12 585 589 584 589 0.74 9 16 1.3 1.4e+04 -3.5 2.0 5 10 598 603 598 603 0.93 10 16 0.032 3.6e+02 1.6 12.0 1 11 609 619 609 631 0.90 11 16 4.5e-10 5e-06 26.7 13.9 1 18 636 653 636 654 0.98 12 16 1.5 1.6e+04 -3.7 0.9 5 10 682 687 682 687 0.78 13 16 0.00099 11 6.4 12.5 1 19 693 710 693 710 0.89 14 16 0.2 2.3e+03 -0.9 0.7 6 11 713 718 713 720 0.90 15 16 8.6e-08 0.00096 19.4 14.7 1 19 746 765 746 765 0.97 16 16 0.0014 16 5.9 16.1 1 19 775 794 775 794 0.97
Sequence Information
- Coding Sequence
- ATGTCCTATTGGCCCCCCTATGAAGAACAGTTGTATGGAACATTTCCAGCATATGATCCAGAATATGTTCAATATACCAACGTCATGTCTTCTTACGGCGGCCACGGTCCCCCAAACTACCCTGTAAATCCACCGTTCGCCGTCTATAATGCTCAAAACTCGTACCGTGGCGACTATTACGAACAGCCGGGTCCCAGCCAGCTGACACCTAGCGATAACTCCAACGAAACTAGAGAAGGAAACGTGCGACAATCCGGCGATACCAATAGAAATAATGGAACAGTTAAGAAAAAGTTGGGGGAGAAAACCAAGTATTGGAACAGTGGAAGGAAGAATGAAAGGGGTGGAAGCGGAAGAACTTTCACGAGAGGTCGATCGGAATACGGGGCAAGGAATGAAGAAACTTACAGAAAGCCAGTAGAGCAAGAAAGGGAGAATTCCACGAAAAACGTTCCTCAAAGCAACTGTGATTTTGAAATCGATGATGGTGGCTCAGTGAGTGGAGGAAGCAGGAATCGTAATAAACCTAGAACTGAAGGTAGACAAAATTATCAAAATAGCAAATATCGGGGCAACTATTATGAAGAAAACAGGCAAAATAGTTATAGAGGTAGAGAAAATCGTTTTAATTGTTATGAAAATAGAAACAATTACGGAAGATATCCTAGACAAGGCGGCAGAAATTACGAAAATAGCGCTTGCGGCGGCAACAACAACGGCAGACAAGGTTATAGGAATAACTGGAGGAAAACGGAATCAATGACAAACTGCAAGCGCTATGAAGCCGAAAACGCTAAGAAAAAACTTGACGCCGCTTCGCAGCGAGAACGTCTGGAACAGATGCTCTCGAGACGTATGCTCGAATGTCTTGTTTGCTGCGAAAAGATTAAGCATACTGATAAGATTTGGTCATGTCAACAATGTTACTTGATCCTCCATCTCGACTGCACCATCGCCTGGGCAAAATCATCGAAATTAGACAACGGATGGCGTTGTCCCGCCTGCCAAAACGTCTGCAGCGAAATCCCGAAACAATACCGCTGTTATTGTGGCAAAACAATCGAGCCGCGCACAGTTCCCGGCGTAATTCCCCATGCTTGTGGGGAACCTTGTATGAGACAGAGTCGCGCTTGCGATCACAAATGTCCGATTCTATGTCATCCGGGTCCTTGTCCCGATTGCAACGCTATGGTATCGAAATTCTGCGGTTGCGGTGCTACTCAACAAACCGTCAAATGCAGTTCGGATACTGAAATTGTTTGTAATTCTATCTGTAACAGATTGTTGAGTTGCGGATTGCATGCCTGTCAGTTGCCTTGTCACGGCGGACCTTGCGATCCTTGCGATAAAACACTACAACAGATCTGTTTTTGTGAAAAAGTTGGTAGACGTGTTGGTTGCACCGCCGAATTTCAAGGGGCCACTCGATATGCTTGCGACGATATTTGCGGAAAAGTTTTGGGTTGCGGCAATCACAAATGCGAGAAGGGTTGTCATGAAGGACCTTGCGAGGATTGTTCAAGAGACGTCAAATTGATTAAGACTTGTCCTTGTGGAAGAACCGAACTGCAGAAAATCAGATCTTCTTGTCTTGATCCGATACCCTGCTGTGATAAGGTATGTGGAAAAATTTTGACATGTGGCCAACCCGCAGCCCCTCATAGCTGTAAACTGCCTTGTCACGCGGGTGAATGTCCTCCTTGTCCCTTGACCACCCTAGTAAGATGCCGATGCGGTTACATGGACAAGGAATTACCTTGTCATGAAGTCACCACTAAAGCCGATGATGCTAGATGCGAAAAGAAGTGCACCAAGAAACGTCTCTGTGGTAAGCATCGCTGCAATCAACGATGTTGCATTGAATTAGAACACATCTGTCCTTTGCCTTGCAACCACTTGTTGGCTTGTGGCCAGCACCGGTGCGACCGCACCTGCCACAGCGGTCGCTGTCCACCTTGTATGGAAACCAGCTTTGAAGAACTCTATTGCGAATGCGGTGCCAACGTGCTCTACCCTCCAATACCTTGCGGTACTAGACCACCGAATTGTAAAAATCCGTGTTCGCGACCACGCCCTTGCGGCCACGAAGTCAATCACTCCTGTCACACTGGAGCTTGTCCTCCTTGCACTGTTCTATGTAAAAGATGGTGTCACGGACAGCACGAACAACGTTCCGCTATACCTTGCTATCAAGATGATTTTAGTTGTGGCTTGCCGTGCGGCAAACAAATGCCTTGCGGCACTCATAAGTGCGTTAAGCCTTGTCATTTAGGGCCGTGTCCGTTGCCTTGTAAACAGAAATGTAATTTGAAGCGGATCCAATGCGGTCATCCTTGTAATGTTCCTTGTCATAAGCCACCCTGTCCATACACTCCTTGTAAATTTACCGTTCCCGTCACTTGTGTTTGCGGGTTGCAAAAAAGTACAAGGCCTTGCATTGAGTTGGCTGAAGAATATAAGGAGCTCGAAATGGCAAATTTGAAGGATAAGATGACGGATTTACTCAAGGACCAACCGGTGGACATCAGCGATATTGTCAATAAGCCCAAAAAACCGTTGACTTTAAAAATCTTGGAGTGCACGGAGGAGTGTCGGGTTCTCGAGCGCAACAGGCGCTTGGCCATCGGACTTCAGATTTGCAACCCGGATCTAAGTCAGAAGCTGACGCCGCGCTATTCCGATTTTATGCGTGGCTGGGCAAAGAAAGACGCGCCTTTCTGTCAGAAGATTCACGATAAATTAGCAGAACTGGTCCAATTAGCTAAACAAAGTAAACAAAAAAGCAGATCCCATTCGTTCGAGTCGATGAACAGAGACAAGCGACATTTTGTTCATGAATATTGTCAACATTTCGGCTGCGACAGTGCTGCTTATGATACGGAACCAAATCGTAACATCGTCGCTACGGCTATTAAGGATAAATCGTGGATGCCTAGTATGAGTTTATTGGAGGTGGTGCGTAGGGAAAACGGACAAAGGAAAGTTCCAGGACCGGTTTTAAGTAAAGGAAGTGTTGGGAAATCTGAAACTGTTTCGTTGAAATTGCCCGGACGGGCAGCAAGACCTAGCACACCTCCAAGGGAGACTGTCGATTATTTTGATAATCCGCCGGTGTAA
- Protein Sequence
- MSYWPPYEEQLYGTFPAYDPEYVQYTNVMSSYGGHGPPNYPVNPPFAVYNAQNSYRGDYYEQPGPSQLTPSDNSNETREGNVRQSGDTNRNNGTVKKKLGEKTKYWNSGRKNERGGSGRTFTRGRSEYGARNEETYRKPVEQERENSTKNVPQSNCDFEIDDGGSVSGGSRNRNKPRTEGRQNYQNSKYRGNYYEENRQNSYRGRENRFNCYENRNNYGRYPRQGGRNYENSACGGNNNGRQGYRNNWRKTESMTNCKRYEAENAKKKLDAASQRERLEQMLSRRMLECLVCCEKIKHTDKIWSCQQCYLILHLDCTIAWAKSSKLDNGWRCPACQNVCSEIPKQYRCYCGKTIEPRTVPGVIPHACGEPCMRQSRACDHKCPILCHPGPCPDCNAMVSKFCGCGATQQTVKCSSDTEIVCNSICNRLLSCGLHACQLPCHGGPCDPCDKTLQQICFCEKVGRRVGCTAEFQGATRYACDDICGKVLGCGNHKCEKGCHEGPCEDCSRDVKLIKTCPCGRTELQKIRSSCLDPIPCCDKVCGKILTCGQPAAPHSCKLPCHAGECPPCPLTTLVRCRCGYMDKELPCHEVTTKADDARCEKKCTKKRLCGKHRCNQRCCIELEHICPLPCNHLLACGQHRCDRTCHSGRCPPCMETSFEELYCECGANVLYPPIPCGTRPPNCKNPCSRPRPCGHEVNHSCHTGACPPCTVLCKRWCHGQHEQRSAIPCYQDDFSCGLPCGKQMPCGTHKCVKPCHLGPCPLPCKQKCNLKRIQCGHPCNVPCHKPPCPYTPCKFTVPVTCVCGLQKSTRPCIELAEEYKELEMANLKDKMTDLLKDQPVDISDIVNKPKKPLTLKILECTEECRVLERNRRLAIGLQICNPDLSQKLTPRYSDFMRGWAKKDAPFCQKIHDKLAELVQLAKQSKQKSRSHSFESMNRDKRHFVHEYCQHFGCDSAAYDTEPNRNIVATAIKDKSWMPSMSLLEVVRRENGQRKVPGPVLSKGSVGKSETVSLKLPGRAARPSTPPRETVDYFDNPPV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01330266;
- 90% Identity
- iTF_01330266;
- 80% Identity
- -