Pser002046.1
Basic Information
- Insect
- Pyrochroa serraticornis
- Gene Symbol
- gata5-a
- Assembly
- GCA_905333025.1
- Location
- HG995158.1:19259081-19268470[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-18 1.2e-14 53.9 2.7 1 34 147 179 147 181 0.97 2 2 7e-18 2.2e-14 53.0 4.2 1 35 252 285 252 286 0.98
Sequence Information
- Coding Sequence
- ATGGATTTAAATTTTTTACAACCCAACACCCTTTATCCCAGGAGCCCGGCCAATTATTCAGGAGGAACAATGCCGTATTACGGGACAGCGTCCCCGGAATTGTCGTCCCAATCTTCACACTTATGGAACTCAGGAGTGAGCAATGTGGTTTTAACTGAGGACTACCCGAAAGTGTCATCCTCCTCGTCGGTGGCAACTTTACCTAGTTTCAATCGCTTCCCCAGCTTCCATAACAACAATAACTCTCATAGGAATGCTTCCTATACAGTACCGAATTCGTCCACATATAACGATTGGCACCAATATTCGGAACCAGCAGGATCTCTTCCCTACAATATACTAACTGCTAGCGGAGGCAGGAATCGTCCTTTATCAGCATCAGCATCGTTGACAGCAATCGACCCCCGTACAGCCGAGTACTTCACTGAGGGAAGAGAATGCGTGAATTGCGGTGCTATCGACACCCCTTTATGGAGAAGAGATGGCACTGGGCATTACTTGTGCAATGCCTGCGGCCTTTACCATAAGATGAACGGCATGAACCGGCCTCTGGTCAAGCAGCCTCGTAGATTGATATGGCTAACCTCCCTGTTTGTTTGCGTTACAGTGGCGGCAGAGCCGGGCCACGGGGGTGTTCAGGATTTCTACAAGAACTACTACCATGGGTATAATGGGGCCACTAGAGCTCCTTTGCACACCACCGAAGAAAAGTCCAGTCGCCGTTTGTCTGCGTCACGACGAGTCGGGTTAACTTGCACGAATTGTCATACTAGCATGACGTCGTTGTGGCGAAGAAACACCCTTGGGGAACCAGTCTGCAACGCTTGTGGTCTCTACTTTAAACTTCATGGAGTTAACAGGCCGTTAGCTATGAAAAAGGATAGCATTCAGACAAGAAAAAGGAAGCCCAAGGGCAGTAAAGATACTAATGGAACGAGGAACGCGATAGCAAACGCTTTGGAGTCATCAATCACCAATATTAAAATGGAACAAAATCCTGTTAAACTGGAACATTCCTCATTGGAAAACTACGAGATGAGATCAGTGGCGTCCCTTAACCACTTGCAGCACACCTCATCTTCAAATTATGTTTATAATAACCAATCGCATCAACGCATGTCGCCTTATACATCTCAATCATCACAGTTATCAAGTAATTACTATGATATGCTGCAACAAACAAGTCCCAGCCCCCCTTCTACAACATCACCAAGCCCAAATTCCTCTCATATTGTAAATAACAACAATGTTAAAGTAATAATGAACGGTGACCATGACCATAACATGGACAGGCCCACGGTGGTGTCGTTGTCCTCCTAA
- Protein Sequence
- MDLNFLQPNTLYPRSPANYSGGTMPYYGTASPELSSQSSHLWNSGVSNVVLTEDYPKVSSSSSVATLPSFNRFPSFHNNNNSHRNASYTVPNSSTYNDWHQYSEPAGSLPYNILTASGGRNRPLSASASLTAIDPRTAEYFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLIWLTSLFVCVTVAAEPGHGGVQDFYKNYYHGYNGATRAPLHTTEEKSSRRLSASRRVGLTCTNCHTSMTSLWRRNTLGEPVCNACGLYFKLHGVNRPLAMKKDSIQTRKRKPKGSKDTNGTRNAIANALESSITNIKMEQNPVKLEHSSLENYEMRSVASLNHLQHTSSSNYVYNNQSHQRMSPYTSQSSQLSSNYYDMLQQTSPSPPSTTSPSPNSSHIVNNNNVKVIMNGDHDHNMDRPTVVSLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -