Basic Information

Insect: Pyrochroa serraticornis
Gene Symbol: -
Assembly: GCA_905333025.1
Location: HG995159.1:9511845-9517808[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0025 0.18 12.7 0.1 1 23 328 351 328 351 0.97

2 16 0.79 55 4.8 0.2 1 23 389 411 389 411 0.96

3 16 4 2.8e+02 2.6 0.5 2 23 448 471 447 471 0.82

4 16 0.0006 0.042 14.6 4.6 1 23 474 497 474 497 0.96

5 16 0.13 9.2 7.3 2.2 2 23 504 526 503 526 0.95

6 16 0.001 0.07 13.9 3.1 1 21 629 649 629 650 0.94

7 16 0.0059 0.41 11.5 1.4 2 23 662 684 661 684 0.91

8 16 0.1 7.1 7.6 0.3 1 23 687 710 687 710 0.96

9 16 1.9 1.3e+02 3.6 0.4 3 23 717 737 715 737 0.95

10 16 0.11 8 7.5 0.2 1 23 741 764 741 764 0.96

11 16 0.011 0.77 10.7 0.5 2 23 771 793 770 793 0.95

12 16 0.12 8.6 7.4 0.9 2 23 802 824 801 824 0.94

13 16 0.075 5.2 8.0 1.2 3 19 831 847 830 852 0.94

14 16 6.6 4.6e+02 1.9 2.1 3 23 971 992 970 992 0.94

15 16 0.15 10 7.1 1.1 2 23 999 1021 998 1021 0.94

16 16 0.21 15 6.6 1.0 1 23 1034 1056 1034 1056 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0025	0.18	12.7	0.1	1	23	328	351	328	351	0.97
2	16	0.79	55	4.8	0.2	1	23	389	411	389	411	0.96
3	16	4	2.8e+02	2.6	0.5	2	23	448	471	447	471	0.82
4	16	0.0006	0.042	14.6	4.6	1	23	474	497	474	497	0.96
5	16	0.13	9.2	7.3	2.2	2	23	504	526	503	526	0.95
6	16	0.001	0.07	13.9	3.1	1	21	629	649	629	650	0.94
7	16	0.0059	0.41	11.5	1.4	2	23	662	684	661	684	0.91
8	16	0.1	7.1	7.6	0.3	1	23	687	710	687	710	0.96
9	16	1.9	1.3e+02	3.6	0.4	3	23	717	737	715	737	0.95
10	16	0.11	8	7.5	0.2	1	23	741	764	741	764	0.96
11	16	0.011	0.77	10.7	0.5	2	23	771	793	770	793	0.95
12	16	0.12	8.6	7.4	0.9	2	23	802	824	801	824	0.94
13	16	0.075	5.2	8.0	1.2	3	19	831	847	830	852	0.94
14	16	6.6	4.6e+02	1.9	2.1	3	23	971	992	970	992	0.94
15	16	0.15	10	7.1	1.1	2	23	999	1021	998	1021	0.94
16	16	0.21	15	6.6	1.0	1	23	1034	1056	1034	1056	0.97

Sequence Information

Coding Sequence: ATGAAGCTGTGTCGGATCTGTGGACACCTCGGCAAAAACCACATTCACATTTTCAAAACCGAGGGACTGAAAAACAAGATAGAAACATGCCTTCCAATAGTGGTTTCCCCTTATTGCCTCCTTCCCGATACTATTTGCGAAAAATGCAGCGACAACCTAGACAATTTCTACAGTTTCATCAAGAGTTGCCTCCAAAACATCATCGTATTAGAATCGCAATACAACATAATCGATTCGTGTTTGAAAAGCAAACGAAAACACGATAAAGGTTGCTCAACCGATTTTACAACAAAAACAGAAGATAAAGCGATTCAATCAGATGATTTTCTTGAAGTTTTCCTCCAAACCAATAAACAATATCGATTCGAATTACCCTCGTTCGACCACACAAACAACTCATTCAAACCACCATTAGTCGATTACCCAATTGAATCAGATTCGGAAGACGAATCCAAACCACCACCTTTTGACACAATCATACCAAAAACAACATTCAACAAACACTATTTTGATGATCCCGAAAACACGTTAATCGACGAAATATCGCAAAGGAAAAGGAAACGAGAAAACGATGACGTCATCGAATTTTCACGACCGAAGATTTTTAAATTGGACAAGTTTTCAGGGCGACGTAAAAGTAGACAACCGAAGAGGGTGTTGATTGACAATGTTGTTAATGATGAAGCCTTGGTGACTATGAATAATGAATTACAAATGGAGGTAGAGGAGGTGTTACCGCTGCAATTTTGTTTGCTTTGCGATGGTCAGTTTGCGGGAGCGGCTGCTTTGGCTAGTCATGTGTTTGAAACGCACGGTGCCGATATGGTACAACAAATTGTTGGAGGAGGGGAAGTTGATAAAAGAAAAAAGTTGCCCAATCTACTGAAGATTTCCGATCTTAAAAAATCCGATTCGACTGAAGACATCCAGCAAGTTGACGAACAATTGACCTCAGACGTACCTCCCACTCTTCTCCCCAGTTTCGTTTGTTCTTTATGTCCAGCTGTTTTTACCGCCCGTCCTGACCTTTTCACCCATCTCCGTCTTAAGCATTTAACTCAGTCCACTTTGATTTGCGGCATCTGTCTTTACCAAGCTAACACTCTAATTGATCTCCAAAACCATATCGAAAACTGCATCCAACAGCATCCCATCACCACTCGTTATTACTGCCAGATATGTCGTTACGGCGATGATAATTCCAAATCGCTTGAAAACCACGTCCTAGTCCACGATTTCCTCATCGAGAATTGTCGCAAAGAAACCAAAATGTTCGATCCTGCCGATTACGTCGAAACAAATGCCGATCACGAATCACCATCACCACCACCGAAGAGTTTAGTATGCAACGAATGCGGTCAAGATGATTTCGCTAGTTTCAAAGAATTCAGCACTCATCGACGCAGTCAACATTCCATTTTCCATTGCGACCTCTGTAACAAGTTCTACGGAAGAAATTCGCATTTGTGGAAACACGTCAATCGTCTCCATAAAGGTCATCCCAGCATCACGTGTCAATTGTGTTATAAAACCAGCGCATCTAAATATCACATGGCACAACATTTCAATAAAATTCACAGTCCCAAACCTTGCAAACAAAAAAGCAACAACGTCGAAACGGTAACTGTTGGCGACTCTGAAGATTTTATGTCACAGAAATTTCAAGCGTTCGATTTTCAATCGGTTAAACAAAGTTTTATGCGTCAAGAATTATTAGAACAGAAACGGAATGAAGTCGATGATAATTCTAATAATCGCTTATCGGATCAGGAGGATGGTTCGATTAGAGTAGACCCGGTTTCTGCACCTAAAGAAATTGACGCTTCCAGCGACCTCTACACGAATATCATCACTAACTATACACCACCGGCTAACGAAGGTGAATTTAAATGTCCCAAGTGCGGCAAAGCCTTCCATAAGAAAACTTTAGTGAAGAAACATAAAAAGAATTGTCGACCACGTCTTCAGAAAGATTTGTTGACCCGTTGCAAGTCGTGTTCGCGCATCTTCAAGGACCGTCAAAGTTTAGCCAAACATCTGGTCAATTACCATTCGAACTACAAGTGCGAACTATGCGGCGTCGGTGTCGCCAGTAAATGTGAAATAGTCTCCCACATCCGTTTCTCGCATCCCGATTGTCACTTGTTTTGTGGAATCTGTCACAATATCCTCCGCGAACAGAAAGACCTCGACGAACATGTTCGCGATCATCTCCAATCGTTCGTGTGTCAGTTTTGTGGTGATGCGTTGTCGTCTCGAATCAAACTCAAGATGCACATATTGAGTTTGCATAGGACGATTTTGGCACTGAGTTGCGGGGTTTGTTTGAAACTGTTTGCCAACCAACACATGTTGAGAGATCACGTTCGATTGGTCCATCGCGATCAGTTGGCACCATTAACTTCGTGTACGGTTTGCGGTAAAAATTACGGTTCGAAATGGAAAACGTACGATCATCTCAATAAGTCTCATGGACGAAATTTTAAAGCTTGCAAAGTTTGTTTGCAAGTTTTCGATACTCAAACTCAATTACAAGCCCACTGTGATAATCAACATCCTAACGTAGTAATTACCAAAAATAATGTCTCGTCACAACCGGTGACGCAACGAAAAAGCGGCAAAGAAGTCGAAAGAGACAACGAAGAAGGTAGCGAAGAGGAAGAGGAAGATGAAGAAGAAGGGGAGGAGGAAAGAGTTGAAATTCCTAAAATAATCGATTTAGAAGAAACTAAGATATCTCTTCTAGAAAAGAGGTTGTTAGGTAAAAAAGTTGCTGACGATAAACCCCAACAGAACAACAAGAAGAACAAAATTGTTGAAGACGAACCTGAAAGTGCTGTAAACTCACCGAATCCTCAATTGAACACTTCGAAACGTACAGTGTACGTTAACAGTAGCGATCCATCGTTTTGTGAGGTATGTACGAAAGCTTGGCCGGCTAAAAAACATTTGTGGCAACACTACATCAGATGTCACAAAAGTGTCGCCGCAACAGTTTGCGGTATTTGTTTGAAAACGAACAGTTCATACAAAAGTTTGCAACGACACTTAAAACAAAACCATCCCCATCTTCTTCACGGTCAAGGTTTCGGTTCGAATTTTATATGTCGAATTTGCGGCCGTTACCACAACGCCAGTTCGAAACTACGCCTTCACATGATCATTCACGAAAAGTTCGATTGGTCTCTTCTCGAAAACAACCAGAATGAAAAGGAGAAAACCGAAACGACCAACGGTTACAGCGATGATGATTACGCTATCAAACAAGAGAATTGCGATATTAATTATGAGAGTTTAATCGAACAAGTCGAATGTTCCTCATCGAGTGTTACCGGTTCGGAAACTGATGCTAAAGAGAAAGATTCGACGTCGGACGATACCGAAGACGAAAGCGATTCGTTGGAATCGGATAACTCGCTCGAAACGCAAATGTTGGAAAATATGGTAAAAGAGAAAACGAGTGTTAATCAAACGTATACGGATACGAGCGATGATTCGAGCGAAACGACTTATTCGAATAAATCTCATAACGGTACTGAAGACGGTTCCAATTCGAGTCCTTCCAATGACGCTTTCCGTTGCAAACCTGAACAGTTGGATTCGGCGATACAGTCCATCAAATATGAATGTGTGGAAACTGTCGATGATGATGTCGATGAAGATTATTGCGAATTGCAAGCGCAAAGTTTGAATGATAACGAAATCGAGTCTGCTGTTGGAAGTATACTTTGA
Protein Sequence: MKLCRICGHLGKNHIHIFKTEGLKNKIETCLPIVVSPYCLLPDTICEKCSDNLDNFYSFIKSCLQNIIVLESQYNIIDSCLKSKRKHDKGCSTDFTTKTEDKAIQSDDFLEVFLQTNKQYRFELPSFDHTNNSFKPPLVDYPIESDSEDESKPPPFDTIIPKTTFNKHYFDDPENTLIDEISQRKRKRENDDVIEFSRPKIFKLDKFSGRRKSRQPKRVLIDNVVNDEALVTMNNELQMEVEEVLPLQFCLLCDGQFAGAAALASHVFETHGADMVQQIVGGGEVDKRKKLPNLLKISDLKKSDSTEDIQQVDEQLTSDVPPTLLPSFVCSLCPAVFTARPDLFTHLRLKHLTQSTLICGICLYQANTLIDLQNHIENCIQQHPITTRYYCQICRYGDDNSKSLENHVLVHDFLIENCRKETKMFDPADYVETNADHESPSPPPKSLVCNECGQDDFASFKEFSTHRRSQHSIFHCDLCNKFYGRNSHLWKHVNRLHKGHPSITCQLCYKTSASKYHMAQHFNKIHSPKPCKQKSNNVETVTVGDSEDFMSQKFQAFDFQSVKQSFMRQELLEQKRNEVDDNSNNRLSDQEDGSIRVDPVSAPKEIDASSDLYTNIITNYTPPANEGEFKCPKCGKAFHKKTLVKKHKKNCRPRLQKDLLTRCKSCSRIFKDRQSLAKHLVNYHSNYKCELCGVGVASKCEIVSHIRFSHPDCHLFCGICHNILREQKDLDEHVRDHLQSFVCQFCGDALSSRIKLKMHILSLHRTILALSCGVCLKLFANQHMLRDHVRLVHRDQLAPLTSCTVCGKNYGSKWKTYDHLNKSHGRNFKACKVCLQVFDTQTQLQAHCDNQHPNVVITKNNVSSQPVTQRKSGKEVERDNEEGSEEEEEDEEEGEEERVEIPKIIDLEETKISLLEKRLLGKKVADDKPQQNNKKNKIVEDEPESAVNSPNPQLNTSKRTVYVNSSDPSFCEVCTKAWPAKKHLWQHYIRCHKSVAATVCGICLKTNSSYKSLQRHLKQNHPHLLHGQGFGSNFICRICGRYHNASSKLRLHMIIHEKFDWSLLENNQNEKEKTETTNGYSDDDYAIKQENCDINYESLIEQVECSSSSVTGSETDAKEKDSTSDDTEDESDSLESDNSLETQMLENMVKEKTSVNQTYTDTSDDSSETTYSNKSHNGTEDGSNSSPSNDAFRCKPEQLDSAIQSIKYECVETVDDDVDEDYCELQAQSLNDNEIESAVGSIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01330167;
90% Identity: -
80% Identity: -