Basic Information

Insect: Pyrochroa serraticornis
Gene Symbol: -
Assembly: GCA_905333025.1
Location: HG995154.1:24099441-24106219[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 0.00029 0.02 15.6 2.7 1 23 32 54 32 54 0.98

2 30 0.029 2 9.3 6.5 1 23 59 82 59 82 0.96

3 30 0.014 0.98 10.3 1.0 1 23 88 110 88 110 0.95

4 30 0.061 4.3 8.3 1.7 1 23 116 139 116 139 0.95

5 30 0.00028 0.02 15.7 2.1 1 23 144 166 144 166 0.98

6 30 0.00013 0.009 16.7 1.2 2 23 176 197 175 197 0.97

7 30 7e-07 4.8e-05 23.9 0.4 1 23 204 226 204 226 0.98

8 30 1.5e-06 0.0001 22.8 0.2 1 23 232 254 232 254 0.97

9 30 8.7e-06 0.00061 20.4 6.0 1 23 260 282 260 282 0.98

10 30 0.27 19 6.3 0.4 1 12 288 299 288 300 0.92

11 30 0.073 5.1 8.1 0.6 1 23 336 358 336 358 0.98

12 30 6.4e-05 0.0045 17.7 0.3 2 23 364 386 363 386 0.96

13 30 8.5e-05 0.0059 17.3 0.9 1 23 392 414 392 414 0.97

14 30 0.016 1.1 10.2 0.6 1 23 420 443 420 443 0.95

15 30 5.2e-06 0.00036 21.1 4.3 1 23 448 470 448 470 0.99

16 30 8.7e-05 0.0061 17.3 3.1 1 23 479 501 479 501 0.98

17 30 0.00024 0.017 15.9 0.3 1 23 508 530 508 530 0.98

18 30 3.8e-05 0.0027 18.4 1.1 2 23 537 558 536 558 0.96

19 30 5.5e-07 3.8e-05 24.2 1.0 1 23 564 586 564 586 0.98

20 30 7.9e-05 0.0055 17.4 0.2 1 20 592 611 592 613 0.94

21 30 0.002 0.14 13.0 1.6 2 23 662 683 661 683 0.97

22 30 0.023 1.6 9.6 4.0 1 23 688 711 688 711 0.95

23 30 7.9e-05 0.0055 17.4 3.5 1 23 717 739 717 739 0.96

24 30 0.096 6.7 7.7 0.5 1 23 745 768 745 768 0.95

25 30 0.018 1.2 10.0 3.4 1 23 773 795 773 795 0.98

26 30 0.0019 0.13 13.1 1.6 1 23 803 824 803 824 0.98

27 30 5.3e-05 0.0037 18.0 0.1 1 23 830 852 830 852 0.98

28 30 2.3e-06 0.00016 22.3 0.5 1 23 858 880 858 880 0.95

29 30 4.7e-07 3.2e-05 24.4 1.8 1 23 886 908 886 908 0.98

30 30 0.021 1.4 9.8 1.1 1 20 914 933 914 934 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	0.00029	0.02	15.6	2.7	1	23	32	54	32	54	0.98
2	30	0.029	2	9.3	6.5	1	23	59	82	59	82	0.96
3	30	0.014	0.98	10.3	1.0	1	23	88	110	88	110	0.95
4	30	0.061	4.3	8.3	1.7	1	23	116	139	116	139	0.95
5	30	0.00028	0.02	15.7	2.1	1	23	144	166	144	166	0.98
6	30	0.00013	0.009	16.7	1.2	2	23	176	197	175	197	0.97
7	30	7e-07	4.8e-05	23.9	0.4	1	23	204	226	204	226	0.98
8	30	1.5e-06	0.0001	22.8	0.2	1	23	232	254	232	254	0.97
9	30	8.7e-06	0.00061	20.4	6.0	1	23	260	282	260	282	0.98
10	30	0.27	19	6.3	0.4	1	12	288	299	288	300	0.92
11	30	0.073	5.1	8.1	0.6	1	23	336	358	336	358	0.98
12	30	6.4e-05	0.0045	17.7	0.3	2	23	364	386	363	386	0.96
13	30	8.5e-05	0.0059	17.3	0.9	1	23	392	414	392	414	0.97
14	30	0.016	1.1	10.2	0.6	1	23	420	443	420	443	0.95
15	30	5.2e-06	0.00036	21.1	4.3	1	23	448	470	448	470	0.99
16	30	8.7e-05	0.0061	17.3	3.1	1	23	479	501	479	501	0.98
17	30	0.00024	0.017	15.9	0.3	1	23	508	530	508	530	0.98
18	30	3.8e-05	0.0027	18.4	1.1	2	23	537	558	536	558	0.96
19	30	5.5e-07	3.8e-05	24.2	1.0	1	23	564	586	564	586	0.98
20	30	7.9e-05	0.0055	17.4	0.2	1	20	592	611	592	613	0.94
21	30	0.002	0.14	13.0	1.6	2	23	662	683	661	683	0.97
22	30	0.023	1.6	9.6	4.0	1	23	688	711	688	711	0.95
23	30	7.9e-05	0.0055	17.4	3.5	1	23	717	739	717	739	0.96
24	30	0.096	6.7	7.7	0.5	1	23	745	768	745	768	0.95
25	30	0.018	1.2	10.0	3.4	1	23	773	795	773	795	0.98
26	30	0.0019	0.13	13.1	1.6	1	23	803	824	803	824	0.98
27	30	5.3e-05	0.0037	18.0	0.1	1	23	830	852	830	852	0.98
28	30	2.3e-06	0.00016	22.3	0.5	1	23	858	880	858	880	0.95
29	30	4.7e-07	3.2e-05	24.4	1.8	1	23	886	908	886	908	0.98
30	30	0.021	1.4	9.8	1.1	1	20	914	933	914	934	0.95

Sequence Information

Coding Sequence: ATGGCGGATAAGTATTTTAAAGGTGGATATTTGAAGTTCCCTCACTCTGTTGGTGCAGATTTCCAGGAGTCCTTGCCCAAGGCGATAGCTTACTTCGTTTGCAACGTGTGCTTTTTACCGCTACCAACTAAATCACATTTGAAAAGACACAAAAGAAAGCACAGAGATAAAATATTTTGTTGCAGCGAGTGCCCTAAAAAATTTCAATTTGGATATCAATTGAAAAAGCATCATACAACTGTACACGAAGAGAAAAGGCCTCACTTCTGCGATGTTTGCAGTAAAGGTTTCACTACGAAAGCAATTCTCGATTCCCACATTTTACGCCATACTAAAGATTACAAATTCAAATGCAACCAATGTAATTCCGGATTTGCATTACTAAACGAACTCACTCACCACAAAGAAATTAAACACGAAGGACATCGTTACGTTTGTGAACATTGCAAAAAAATATTTATGGACTTACGTTATTTTCGGGCTCATGTCCTCACCCATGATCCCAATTATGTTAGAGAAACGATAGTTTGTAAAGAATGTTCAAAAGTTTATACTTCTAAATTAGGTTTCTACCGACATATGAAAAGACATAATGGAAAAGCGACAAACTATATTTGTGATGTTTGTGGAAAAAGCGTAACTAGTTTCGCCAGTTTGAAGAATCATATGAGAACACATACCGGAGAAAAACCTTTCGATTGTGATACTTGCGGCAAAGCTTTCATCTCAAAGAGAATGTTAACCATTCATATTCGTGTTCATACTAAGGAGAAGCCGTTTAAATGTAGCGTGTGTCAAAAAAGTTTCTCCCAAAAATGTACTCTTAACATGCACATGCGGTACCACACCGGAGATCGCCCGTATAAGTGCGAAATTTGCGAAAAAGGTTTCGTTAATGGTATTTCTTCATTAATTGCAGAAACGGATTCTAACGCAACTATTTTCAGGTACCACGCATACTTCCAAGACGTTGCACATTGTGAAAACGCCCAAACTGACCAAGTATACACTTGTCGATTTTGTCCCGCCGTCTATCTGACAAGTAACAAATTACGAACCCACGCCCGCATCCATAAGGAAAAAACAATTTCCTGCGATACATGCAACAAAAAATATCGTTTTCCCTACGAATTGGTCAAACACATCAAAGTCGCCCATGAAGCGCAAAGAACTCACGTGTGCGACATCTGTACGGAAGCCTTCAAAACTCTCAACAATCTCAAAATTCACTCATTAACCCATACCAAAGATTATAAATATAAATGTGACGAGTGCGAAGCCGGATATCGCAACATCAAACGACTCAACAGACACAAAGAAATTAAACACGAAGGTTTGAGATTTACCTGCGAACATTGCAAGAAAATTTTCAAGAGTGAAGAGTATTTTCAGATACATATGCGCACTCATGATCCTGATTACGTTAAGAAAATTCACGTTTGTACTGTGTGCTCTAAAGTTATTTCGAATCTACAAAATTTTAAAAAACATATGAGGAAACATACCGGGGAACATACGAAGCATGTTTGTGATGTTTGTGGAAAAGGTATCGCAAGTATGGCTAGTTTTAAGGATCATATGAGGACTCATACAGGCGAAAAACCTTGTGTTTGCGACTTTTGCGGCAAGGCGTTTATTAATAATAAATTGTTGGTGATGCATAGGCGAGTACACACTAAGGAGAAACCGTTTCAGTGTTCTGTCTGTGCGAAGAGTTTTTCGCAGAAAGGAACGCTTAATGTTCATATGCGCTACCATTCTGGTGATCGGCCCTACAAGTGCCAAATTTGCTCAAAGGGATTTATTACGAATACTCTACTTAAGAAACATGCTCTTATTGCCATTTCTGGCAAATATAGCTATGACAACGAAAGTTGCCATTTCTCCTGCTTAGCAGCTAAACGGTTTTCTCCTGTTCCTCTGGAAATATCTAACATCGTGAAAGCCGATCCCGAACTACAACCCCAACCATCAAAATTGATTCGTTGTGAAATTTGTTCCGCCACTTTCGCAACAACTAAGCGTCTGAAGAAACACAAACGCTATCACCGAGAGAAAATTCATAATTGTCAATTGTGCGAAAAAAAATACACTTTCCATTATGAATTAGTACAACACCTAAAACTAGCTCATGAAACCAACGAACCATATTGTTGCGAAGTTTGCAACAAAATATTCAAAAGTAAAGTTTATCTTCGGCGTCATTTTTTGATCCATTCGAAAGGGTTTAAACATAAATGCGATCAATGCGAAGCATCTTTTCTAAATCCTGGTGGTTTAAAACTCCATAAAAGCGTCCAACATGAAGGACTCCGCTTCAAATGTGAAGAATGCGAAAAATTGTTTAAATGTCGAGTCACTTGGCGAAAACATATGCAGGTCCATGAAACGGGTTACAGAGAGACCTTTATTTGTCCAATTTGCTCCAAAGTGTTGACAAAAAGGGGGTTACATAATCACATGAAGCGACACGGTGATGGTGAAAGTTATATGTGTGACGTTTGCGGAAAAAGTGTAACTACTGTTGCTTCGTTGAAGGACCATGTAAAAATCCATAACGGAGTGAAACCGTTTCTTTGTGATTTTTGCGGAAAATCGTTTGCTAGACGAGATTACTTGATAGCTCACAAGCGGGTTCACACTAAAGAAAAACCATTTTCATGTAAGGATTGTGGCAAGAGTTTTACACAATTGGGGAGTCTTAAAATACACAAGCGATATCATACCGGAGAAAAGCCGTACACTTGCGAAGTTTGCTCGAAGGGGTTTGTGTCTGGGACTTTGCTCAAGAGTCATAAGTGTTGA
Protein Sequence: MADKYFKGGYLKFPHSVGADFQESLPKAIAYFVCNVCFLPLPTKSHLKRHKRKHRDKIFCCSECPKKFQFGYQLKKHHTTVHEEKRPHFCDVCSKGFTTKAILDSHILRHTKDYKFKCNQCNSGFALLNELTHHKEIKHEGHRYVCEHCKKIFMDLRYFRAHVLTHDPNYVRETIVCKECSKVYTSKLGFYRHMKRHNGKATNYICDVCGKSVTSFASLKNHMRTHTGEKPFDCDTCGKAFISKRMLTIHIRVHTKEKPFKCSVCQKSFSQKCTLNMHMRYHTGDRPYKCEICEKGFVNGISSLIAETDSNATIFRYHAYFQDVAHCENAQTDQVYTCRFCPAVYLTSNKLRTHARIHKEKTISCDTCNKKYRFPYELVKHIKVAHEAQRTHVCDICTEAFKTLNNLKIHSLTHTKDYKYKCDECEAGYRNIKRLNRHKEIKHEGLRFTCEHCKKIFKSEEYFQIHMRTHDPDYVKKIHVCTVCSKVISNLQNFKKHMRKHTGEHTKHVCDVCGKGIASMASFKDHMRTHTGEKPCVCDFCGKAFINNKLLVMHRRVHTKEKPFQCSVCAKSFSQKGTLNVHMRYHSGDRPYKCQICSKGFITNTLLKKHALIAISGKYSYDNESCHFSCLAAKRFSPVPLEISNIVKADPELQPQPSKLIRCEICSATFATTKRLKKHKRYHREKIHNCQLCEKKYTFHYELVQHLKLAHETNEPYCCEVCNKIFKSKVYLRRHFLIHSKGFKHKCDQCEASFLNPGGLKLHKSVQHEGLRFKCEECEKLFKCRVTWRKHMQVHETGYRETFICPICSKVLTKRGLHNHMKRHGDGESYMCDVCGKSVTTVASLKDHVKIHNGVKPFLCDFCGKSFARRDYLIAHKRVHTKEKPFSCKDCGKSFTQLGSLKIHKRYHTGEKPYTCEVCSKGFVSGTLLKSHKC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -