Pser013166.1
Basic Information
- Insect
- Pyrochroa serraticornis
- Gene Symbol
- lov
- Assembly
- GCA_905333025.1
- Location
- HG995155.1:19751350-19755459[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3e-18 3e-15 55.9 0.0 1 44 371 414 371 415 0.96
Sequence Information
- Coding Sequence
- ATGCCACAATCGTCGGGTGAAAATATGAACCAATCGCATTACTCTTTGCGATGGAACAATCATCAAACTCATATGCTAGCAGCCTTTGAAGCACTTCTTCAAGCCGAAACCCTTGTCGACGTCACTTTAGTGTGTGACGATTTCTCTATACGAGCCCACAAAGTTGTTCTTACAGCTTCATCGCCGCTTTTTCAAAAAATTTTCGCCGACAATCCTTGCGACCATCCAGTCATAGTTCTGAAAGATTTCGAAGGCGAACTCATCCAGCTCTTGGTGGATTTCATGTACAGAGGTGAGATCAACGTGAGCCAGGATCATTTAACGAACCTCATGAAGGCTGCGGAGAATCTCCAAGTGAGGGGTCTAGCCCATCCCATCCTGAACCGGACGCCGACACCGTCGGCATCACCCGACATAGAAAGACCTATTTTCACGTCAACATCGGGGATGTCCATCCGGAACCAGAGTATTTCACCTTTATTGTACGAACCCCCCATTAAACTACCCCACATGTCGAGACTCAATTTCCCCGACGCCCTTTTGCCCCGCCAAGACTGCCAATCGCCCATCACCCGCAGGAAACAGGCACGACCACGAAGGAGGTCGGGCGAAATATGCGTAGCTCAAGACCTCAGCAAATCCGCCACTCCTCCCATCGAAGAAACCGCCGAGAATTTGAGCATGAAAAAAATCAAAGACGACAGAGCCAGCAGATTGGAAGAGGAGAAATTTAGGGCGGCGACGACGAGAGCGTCGGAAATGGCCAGGAGTCCCGAACTCGACCTCAGCATGCCGTCGAAAGATTTTAGACGATCACCACCTGTTAGCCTGCCGCCTTTGAATATGAAACAAGAAATCGAGAACCATTCGCCTTTGTCGTTTCCACCCATGCCGTCGGTTTCTGCACTTGCGATGACTCCTCCACATAGCAAATTTTTCGGTCTGGATTCGCCCCTGGGACTTTTTCCATCTGCTCTGGACTGCAGAAATCCTTTGTTCGACATGCCCGATCCGAGAACCACTCCCGATTCGCAGATGTACGCCAAGAAGAAAATGGGCCGGCCTAAAGGCCAGCATTCGGCTCCCAGAGGTGGTCCTCCTCGTTCCTGGACCAACGCCGAATTAACGGAAGCCCTCCAGCACGTTTGGAATAAAAAAATGACAACATCGCAAGCGTCCCGCATTTTCGGCATCCCTTACAACTCCCTTCTCATGTACGTTCGCGGTAAATACGGCAAAAGTCTGAAACTGGAACAGCTACGTAAAGACTGCATAGGCGGTCCGAATGCGGCCAGCATGGACCTGCTTAACATATCCGGCAGCAACAACAACAACAATTCCTTGAAAAACGACCGCGGCGATCCCGACATCCAACCGACCCGACCATCCAGCAATGAAGCCCCCCAAGCTCCCGTATACAACCCGTTCACCCACAATTACTACCACGATTTCAGCAATTTTCCAGTACCGGTCGGCATGATCCATCTGTTGCCGCAAAGCGAAAAGATCCGCGAACATTACGGACAACCACCCCAACAACAACAACAACAACAACAACAACAACAACAACAAGAAGAAGACTGCAAAAGCGTCAAAAAAGAAATGGAGGAGGACTCGGATATGTTCAGACCGCCAGCGCTATCTGTTGACGATAGGCGGGAATTGGTTCAGCAGAACGGACAAGACTAG
- Protein Sequence
- MPQSSGENMNQSHYSLRWNNHQTHMLAAFEALLQAETLVDVTLVCDDFSIRAHKVVLTASSPLFQKIFADNPCDHPVIVLKDFEGELIQLLVDFMYRGEINVSQDHLTNLMKAAENLQVRGLAHPILNRTPTPSASPDIERPIFTSTSGMSIRNQSISPLLYEPPIKLPHMSRLNFPDALLPRQDCQSPITRRKQARPRRRSGEICVAQDLSKSATPPIEETAENLSMKKIKDDRASRLEEEKFRAATTRASEMARSPELDLSMPSKDFRRSPPVSLPPLNMKQEIENHSPLSFPPMPSVSALAMTPPHSKFFGLDSPLGLFPSALDCRNPLFDMPDPRTTPDSQMYAKKKMGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIGGPNAASMDLLNISGSNNNNNSLKNDRGDPDIQPTRPSSNEAPQAPVYNPFTHNYYHDFSNFPVPVGMIHLLPQSEKIREHYGQPPQQQQQQQQQQQQQEEDCKSVKKEMEEDSDMFRPPALSVDDRRELVQQNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01283545;
- 90% Identity
- iTF_01283545;
- 80% Identity
- iTF_01283545;