Basic Information

Gene Symbol
-
Assembly
GCA_963924145.1
Location
OZ001643.1:31522531-31525458[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.11 7.1e+02 1.8 0.0 25 33 34 42 25 45 0.84
2 20 0.11 7.1e+02 1.8 0.0 25 33 80 88 71 91 0.84
3 20 0.11 7.1e+02 1.8 0.0 25 33 126 134 117 137 0.84
4 20 0.11 7.1e+02 1.8 0.0 25 33 172 180 163 183 0.84
5 20 0.11 7.1e+02 1.8 0.0 25 33 218 226 209 229 0.84
6 20 0.11 7.1e+02 1.8 0.0 25 33 264 272 255 275 0.84
7 20 0.11 7.1e+02 1.8 0.0 25 33 310 318 301 321 0.84
8 20 0.11 7.1e+02 1.8 0.0 25 33 356 364 347 367 0.84
9 20 0.11 7.1e+02 1.8 0.0 25 33 402 410 393 413 0.84
10 20 0.11 7.1e+02 1.8 0.0 25 33 448 456 439 459 0.84
11 20 0.11 7.1e+02 1.8 0.0 25 33 494 502 485 505 0.84
12 20 0.11 7.1e+02 1.8 0.0 25 33 540 548 531 551 0.84
13 20 0.11 7.1e+02 1.8 0.0 25 33 586 594 577 597 0.84
14 20 0.11 7.1e+02 1.8 0.0 25 33 632 640 623 643 0.84
15 20 0.11 7.1e+02 1.8 0.0 25 33 678 686 669 689 0.84
16 20 0.11 7.1e+02 1.8 0.0 25 33 724 732 715 735 0.84
17 20 0.11 7.1e+02 1.8 0.0 25 33 770 778 761 781 0.84
18 20 0.11 7.1e+02 1.8 0.0 25 33 816 824 807 827 0.84
19 20 0.11 7.1e+02 1.8 0.0 25 33 862 870 853 873 0.84
20 20 0.11 7.1e+02 1.8 0.0 25 33 908 916 899 919 0.84

Sequence Information

Coding Sequence
ATGTCTCTGTGGCGGGCGTGCCGCGGCCGGGCGTCGCGCCGCTCGGcgctgcgcgggcgcaccgcggCGGGCGCGCGCGACATGCCGCGAACACTGGACGCGTGCCTTATATACTATAAGACGCACCTGTCGCGGTCCATGTCTCTGTGGCGGGCGTGCCGCGGCCGGGCGTCGCGCCGCTCGGcgctgcgcgggcgcaccgcggCGGGCGCGCGCGACATGCCGCGAACACTGGACGCGTGCCTTATATACTATAAGACGCACCTGTCGCGGTCCATGTCTCTGTGGCGGGCGTGCCGCGGCCGGGCGTCGCGCCGCTCGGcgctgcgcgggcgcaccgcggCGGGCGCGCGCGACATGCCGCGAACACTGGACGCGTGCCTTATATACTATAAGACGCACCTGTCGCGGTCCATGTCTCTGTGGCGGGCGTGCCGCGGCCGGGCGTCGCGCCGCTCGGcgctgcgcgggcgcaccgcggCGGGCGCGCGCGACATGCCGCGAACACTGGACGCGTGCCTTATATACTATAAGACGCACCTGTCGCGGTCCATGTCTCTGTGGCGGGCGTGCCGCGGCCGGGCGTCGCGCCGCTCGGcgctgcgcgggcgcaccgcggCGGGCGCGCGCGACATGCCGCGAACACTGGACGCGTGCCTTATATACTATAAGACGCACCTGTCGCGGTCCATGTCTCTGTGGCGGGCGTGCCGCGGCCGGGCGTCGCGCCGCTCGGcgctgcgcgggcgcaccgcggCGGGCGCGCGCGACATGCCGCGAACACTGGACGCGTGCCTTATATACTATAAGACGCACCTGTCGCGGTCCATGTCTCTGTGGCGGGCGTGCCGCGGCCGGGCGTCGCGCCGCTCGGcgctgcgcgggcgcaccgcggCGGGCGCGCGCGACATGCCGCGAACACTGGACGCGTGCCTTATATACTATAAGACGCACCTGTCGCGGTCCATGTCTCTGTGGCGGGCGTGCCGCGGCCGGGCGTCGCGCCGCTCGGcgctgcgcgggcgcaccgcggCGGGCGCGCGCGACATGCCGCGAACACTGGACGCGTGCCTTATATACTATAAGACGCACCTGTCGCGGTCCATGTCTCTGTGGCGGGCGTGCCGCGGCCGGGCGTCGCGCCGCTCGGcgctgcgcgggcgcaccgcggCGGGCGCGCGCGACATGCCGCGAACACTGGACGCGTGCCTTATATACTATAAGACGCACCTGTCGCGGTCCATGTCTCTGTGGCGGGCGTGCCGCGGCCGGGCGTCGCGCCGCTCGGcgctgcgcgggcgcaccgcggCGGGCGCGCGCGACATGCCGCGAACACTGGACGCGTGCCTTATATACTATAAGACGCACCTGTCGCGGTCCATGTCTCTGTGGCGGGCGTGCCGCGGCCGGGCGTCGCGCCGCTCGGcgctgcgcgggcgcaccgcggCGGGCGCGCGCGACATGCCGCGAACACTGGACGCGTGCCTTATATACTATAAGACGCACCTGTCGCGGTCCATGTCTCTGTGGCGGGCGTGCCGCGGCCGGGCGTCGCGCCGCTCGGcgctgcgcgggcgcaccgcggCGGGCGCGCGCGACATGCCGCGAACACTGGACGCGTGCCTTATATACTATAAGACGCACCTGTCGCGGTCCATGTCTCTGTGGCGGGCGTGCCGCGGCCGGGCGTCGCGCCGCTCGGcgctgcgcgggcgcaccgcggCGGGCGCGCGCGACATGCCGCGAACACTGGACGCGTGCCTTATATACTATAAGACGCACCTGTCGCGGTCCATGTCTCTGTGGCGGGCGTGCCGCGGCCGGGCGTCGCGCCGCTCGGcgctgcgcgggcgcaccgcggCGGGCGCGCGCGACATGCCGCGAACACTGGACGCGTGCCTTATATACTATAAGACGCACCTGTCGCGGTCCATGTCTCTGTGGCGGGCGTGCCGCGGCCGGGCGTCGCGCCGCTCGGcgctgcgcgggcgcaccgcggCGGGCGCGCGCGACATGCCGCGAACACTGGACGCGTGCCTTATATACTATAAGACGCACCTGTCGCGGTCCATGTCTCTGTGGCGGGCGTGCCGCGGCCGGGCGTCGCGCCGCTCGGcgctgcgcgggcgcaccgcggCGGGCGCGCGCGACATGCCGCGAACACTGGACGCGTGCCTTATATACTATAAGACGCACCTGTCGCGGTCCATGTCTCTGTGGCGGGCGTGCCGCGGCCGGGCGTCGCGCCGCTCGGcgctgcgcgggcgcaccgcggCGGGCGCGCGCGACATGCCGCGAACACTGGACGCGTGCCTTATATACTATAAGACGCACCTGTCGCGGTCCATGTCTCTGTGGCGGGCGTGCCGCGGCCGGGCGTCGCGCCGCTCGGcgctgcgcgggcgcaccgcggCGGGCGCGCGCGACATGCCGCGAACACTGGACGCGTGCCTTATATACTATAAGACGCACCTGTCGCGGTCCATGTCTCTGTGGCGGGCGTGCCGCGGCCGGGCGTCGCGCCGCTCGGcgctgcgcgggcgcaccgcggCGGGCGCGCGCGACATGCCGCGAACACTGGACGCGTGCCTTATATACTATAAGACGCACCTGTCGCGGTCCATGTCTCTGTGGCGGGCGTGCCGCGGCCGGGCGTCGCGCCGCTCGGcgctgcgcgggcgcaccgcggCGGGCGCGCGCGACATGCCGCGAACACTGGACGCGTGCCTTATATACTATAAGACGCACCTGTCGCGGTCCATGTCTCTGTGGCGGGCGTGCCGCGGCCGGGCGTCGCGCCGCTCGGcgctgcgcgggcgcaccgcggCGGGCGCGCGCGACATGCCGGCGCGCACGCAGCGCTCGAACACCTGCACACGTGGGTACTCAATACGCAATACTATATTGCTCCATAGTGTACAATTATAG
Protein Sequence
MSLWRACRGRASRRSALRGRTAAGARDMPRTLDACLIYYKTHLSRSMSLWRACRGRASRRSALRGRTAAGARDMPRTLDACLIYYKTHLSRSMSLWRACRGRASRRSALRGRTAAGARDMPRTLDACLIYYKTHLSRSMSLWRACRGRASRRSALRGRTAAGARDMPRTLDACLIYYKTHLSRSMSLWRACRGRASRRSALRGRTAAGARDMPRTLDACLIYYKTHLSRSMSLWRACRGRASRRSALRGRTAAGARDMPRTLDACLIYYKTHLSRSMSLWRACRGRASRRSALRGRTAAGARDMPRTLDACLIYYKTHLSRSMSLWRACRGRASRRSALRGRTAAGARDMPRTLDACLIYYKTHLSRSMSLWRACRGRASRRSALRGRTAAGARDMPRTLDACLIYYKTHLSRSMSLWRACRGRASRRSALRGRTAAGARDMPRTLDACLIYYKTHLSRSMSLWRACRGRASRRSALRGRTAAGARDMPRTLDACLIYYKTHLSRSMSLWRACRGRASRRSALRGRTAAGARDMPRTLDACLIYYKTHLSRSMSLWRACRGRASRRSALRGRTAAGARDMPRTLDACLIYYKTHLSRSMSLWRACRGRASRRSALRGRTAAGARDMPRTLDACLIYYKTHLSRSMSLWRACRGRASRRSALRGRTAAGARDMPRTLDACLIYYKTHLSRSMSLWRACRGRASRRSALRGRTAAGARDMPRTLDACLIYYKTHLSRSMSLWRACRGRASRRSALRGRTAAGARDMPRTLDACLIYYKTHLSRSMSLWRACRGRASRRSALRGRTAAGARDMPRTLDACLIYYKTHLSRSMSLWRACRGRASRRSALRGRTAAGARDMPRTLDACLIYYKTHLSRSMSLWRACRGRASRRSALRGRTAAGARDMPRTLDACLIYYKTHLSRSMSLWRACRGRASRRSALRGRTAAGARDMPARTQRSNTCTRGYSIRNTILLHSVQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-